BLASTX nr result

ID: Coptis21_contig00021217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021217
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17543.3| unnamed protein product [Vitis vinifera]              142   9e-32
ref|XP_002267917.1| PREDICTED: uncharacterized protein LOC100263...   116   7e-24
emb|CAN68317.1| hypothetical protein VITISV_032189 [Vitis vinifera]   116   7e-24
ref|XP_002310801.1| predicted protein [Populus trichocarpa] gi|2...   114   4e-23
ref|XP_002510365.1| conserved hypothetical protein [Ricinus comm...   112   2e-22

>emb|CBI17543.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  142 bits (359), Expect = 9e-32
 Identities = 104/290 (35%), Positives = 143/290 (49%), Gaps = 17/290 (5%)
 Frame = -3

Query: 890 MAKRFKLKLSSIL----ICKSKNPSNFPITPIPLSHKPNXXXXXXXXXXXXXSCGGNRSS 723
           MA+RFKL++S ++     C+SK+PS+ P  P+P+S +                       
Sbjct: 1   MARRFKLRISRVIPSFQSCRSKDPSSLPENPVPVSSRQCFSDDDDSESPEFKW------- 53

Query: 722 KKPKKTYIRYYSNITDSTPNTPPRKKIYNSSASEDSDEYVSSSP----AFGKNKKSKKPK 555
           KK  K ++   + + D  P    R+KIYNSS S +SD+ V   P    A  K ++SKK K
Sbjct: 54  KKEDKWHV--VAKVYDDNP----RQKIYNSSVSGESDDDVLPPPPPPTAEKKKRRSKKKK 107

Query: 554 TRFSY-CSAETAWFSSEEVXXXXXXXXXXXXXXXXSGTGVQLDPINETPINGLIXXXXXX 378
             F    S  +A  SS                         L+ I E P+NG+       
Sbjct: 108 AAFRVRMSTSSADISSSRSFSTDSSSEFNP----------HLETIREMPMNGVRRKKKKN 157

Query: 377 XXXXXXXXXXKY----YPCR----NKVVPTXXXXXXXXXXXXESLAVMKKSEDPYGDFRR 222
                            P R     +++P              S AV+KKSEDPY DF+R
Sbjct: 158 AKKVKKTSGLSSPESESPARLSMFQRLIPCTVDGKVRE-----SFAVVKKSEDPYEDFKR 212

Query: 221 SMMEMIVEREMFETKDLEQLLQCFLSLNSRHHYGVIIQAFSDIWEILFCK 72
           SMMEMI+E++MFE KDLEQLL CFLSLNSRHH+GVI++AF++IW++LFCK
Sbjct: 213 SMMEMILEKQMFEEKDLEQLLHCFLSLNSRHHHGVIVEAFTEIWDVLFCK 262


>ref|XP_002267917.1| PREDICTED: uncharacterized protein LOC100263246 [Vitis vinifera]
          Length = 360

 Score =  116 bits (291), Expect = 7e-24
 Identities = 51/67 (76%), Positives = 63/67 (94%)
 Frame = -3

Query: 272 SLAVMKKSEDPYGDFRRSMMEMIVEREMFETKDLEQLLQCFLSLNSRHHYGVIIQAFSDI 93
           S AV+KKSEDPY DF+RSMMEMI+E++MFE KDLEQLL CFLSLNSRHH+GVI++AF++I
Sbjct: 283 SFAVVKKSEDPYEDFKRSMMEMILEKQMFEEKDLEQLLHCFLSLNSRHHHGVIVEAFTEI 342

Query: 92  WEILFCK 72
           W++LFCK
Sbjct: 343 WDVLFCK 349


>emb|CAN68317.1| hypothetical protein VITISV_032189 [Vitis vinifera]
          Length = 360

 Score =  116 bits (291), Expect = 7e-24
 Identities = 51/67 (76%), Positives = 63/67 (94%)
 Frame = -3

Query: 272 SLAVMKKSEDPYGDFRRSMMEMIVEREMFETKDLEQLLQCFLSLNSRHHYGVIIQAFSDI 93
           S AV+KKSEDPY DF+RSMMEMI+E++MFE KDLEQLL CFLSLNSRHH+GVI++AF++I
Sbjct: 283 SFAVVKKSEDPYEDFKRSMMEMILEKQMFEEKDLEQLLHCFLSLNSRHHHGVIVEAFTEI 342

Query: 92  WEILFCK 72
           W++LFCK
Sbjct: 343 WDVLFCK 349


>ref|XP_002310801.1| predicted protein [Populus trichocarpa] gi|222853704|gb|EEE91251.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score =  114 bits (285), Expect = 4e-23
 Identities = 52/67 (77%), Positives = 61/67 (91%)
 Frame = -3

Query: 272 SLAVMKKSEDPYGDFRRSMMEMIVEREMFETKDLEQLLQCFLSLNSRHHYGVIIQAFSDI 93
           S AV+K+SEDPY DF+RSMMEMI+E+EMFE KDLEQLL CFLSLNSR H+GVI+QAFS+I
Sbjct: 284 SFAVVKRSEDPYEDFKRSMMEMILEKEMFEEKDLEQLLHCFLSLNSREHHGVIVQAFSEI 343

Query: 92  WEILFCK 72
           WE LFC+
Sbjct: 344 WETLFCR 350


>ref|XP_002510365.1| conserved hypothetical protein [Ricinus communis]
           gi|223551066|gb|EEF52552.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score =  112 bits (279), Expect = 2e-22
 Identities = 50/68 (73%), Positives = 64/68 (94%)
 Frame = -3

Query: 272 SLAVMKKSEDPYGDFRRSMMEMIVEREMFETKDLEQLLQCFLSLNSRHHYGVIIQAFSDI 93
           S+AV+KKSEDPY DF+RSM+EMI+E++MFE KDLE+LLQCFL+LNSR ++GVI++AFS+I
Sbjct: 259 SVAVVKKSEDPYEDFKRSMLEMILEKQMFEEKDLEELLQCFLTLNSRQYHGVIVEAFSEI 318

Query: 92  WEILFCKS 69
           WEILFC S
Sbjct: 319 WEILFCDS 326


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