BLASTX nr result

ID: Coptis21_contig00021203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021203
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285624.1| PREDICTED: GATA transcription factor 1-like ...   192   7e-47
ref|XP_002518163.1| GATA transcription factor, putative [Ricinus...   182   1e-43
ref|XP_002299291.1| predicted protein [Populus trichocarpa] gi|2...   177   4e-42
ref|XP_004150343.1| PREDICTED: GATA transcription factor 1-like ...   170   4e-40
dbj|BAC98492.1| AG-motif binding protein-2 [Nicotiana tabacum]        159   9e-37

>ref|XP_002285624.1| PREDICTED: GATA transcription factor 1-like [Vitis vinifera]
          Length = 251

 Score =  192 bits (489), Expect = 7e-47
 Identities = 117/259 (45%), Positives = 145/259 (55%), Gaps = 28/259 (10%)
 Frame = -1

Query: 875 SMETAALSIDNLLDFSSDIGXXXXXXXXXXXXHPLGVNNNHHNTELT---HSESVPQHLL 705
           S++ AA  +D+LLDFSSDIG                      ++ L    HS S+P    
Sbjct: 3   SLDPAACFVDDLLDFSSDIGEDDDDDHK---------RRTRSSSSLLVGGHSRSLPDPP- 52

Query: 704 VEEELEWLSNQDAFPQIEMF-DILPMKPNNNVPKNQSPISVLGNSDSI------------ 564
           VEEELEWL N+D FP +E F D LP    N +PK QSPISVL NS               
Sbjct: 53  VEEELEWL-NKDVFPGVETFLDYLPTSVEN-IPKQQSPISVLENSSHSSSSNNSNSSTTT 110

Query: 563 -------IRIPVQAXXXXXXXXXXXXSDFAGRQWWY-----QYEPKKKSVGVTRMAGMAN 420
                   R+P +A            SD  G+ WW+            S   ++    ++
Sbjct: 111 IMSCCENFRVPSRARSKRRRRRHKDFSDIPGQPWWWWSSQGNTNANHSSPTNSKQTITSS 170

Query: 419 SSGRRCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFSGDLHSNS 240
           + GR+C HCQ+EKTPQWRAGPLGPKTLCNACGVRYKSGRL+ EYRPASSPTFS  +HSNS
Sbjct: 171 TIGRKCQHCQAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVAEYRPASSPTFSSKVHSNS 230

Query: 239 HRKVLDMRKQKQKDVMFLP 183
           HRK+++MRK KQ+DV+  P
Sbjct: 231 HRKIMEMRKLKQRDVVVRP 249


>ref|XP_002518163.1| GATA transcription factor, putative [Ricinus communis]
           gi|223542759|gb|EEF44296.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 205

 Score =  182 bits (461), Expect = 1e-43
 Identities = 102/188 (54%), Positives = 123/188 (65%), Gaps = 22/188 (11%)
 Frame = -1

Query: 701 EEELEWLSNQDAFPQIEMF-DILPMKPNNNVPKNQSPISVLGNS--------------DS 567
           EEELEWLSN+DAFP +E F DIL   P + + K++SP+SVL NS              DS
Sbjct: 12  EEELEWLSNKDAFPSVETFVDILTENPGS-LQKHRSPVSVLENSTTSSTSNSGHSGTNDS 70

Query: 566 II-------RIPVQAXXXXXXXXXXXXSDFAGRQWWYQYEPKKKSVGVTRMAGMANSSGR 408
           +I        +PV+A             D  G+Q W+  E  KK   V  +   +++ GR
Sbjct: 71  VIMNYCRSLHVPVKARSKPHRRRRR---DLGGQQCWWSQENLKK---VKVVKSSSSTIGR 124

Query: 407 RCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFSGDLHSNSHRKV 228
           +C HC +EKTPQWRAGPLGPKTLCNACGVRYKSGRL+PEYRPASSPTFS  LHSNSHRKV
Sbjct: 125 KCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFSSVLHSNSHRKV 184

Query: 227 LDMRKQKQ 204
           L+MR+QKQ
Sbjct: 185 LEMRRQKQ 192


>ref|XP_002299291.1| predicted protein [Populus trichocarpa] gi|222846549|gb|EEE84096.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  177 bits (448), Expect = 4e-42
 Identities = 113/253 (44%), Positives = 142/253 (56%), Gaps = 29/253 (11%)
 Frame = -1

Query: 875 SMETAA-LSIDNLLDFSSDIGXXXXXXXXXXXXHPLGVNNNHHNTELTHSES--VPQHLL 705
           S++TAA   +D+LLDF SDIG                      N    H  S  V +H L
Sbjct: 3   SLDTAACFMVDDLLDFCSDIGEEEDGEEHQRNSKKSRRALPSLNPNALHPASFNVLEHSL 62

Query: 704 V----EEELEWLSNQDAFPQIEM-FDILPMKPNNNVPKNQSPISVLGNSDSI-------- 564
           +    EEELEWLSN+DAFP +E  F  L  +P + +PK+ SP+SVL NS +         
Sbjct: 63  LPEFAEEELEWLSNKDAFPTVETCFGSLSGEPGS-IPKHHSPVSVLENSTTSSTSNSGNS 121

Query: 563 -----------IRIPVQAXXXXXXXXXXXXSDFAGRQWWYQ--YEPKKKSVGVTRMAGMA 423
                      +R+PV+A             +     WW Q  +  +K +V V ++    
Sbjct: 122 SNSNIIMSYCRLRVPVKARSKRHHRHPREIQE--QECWWSQENFITRKPAVSVAKL---- 175

Query: 422 NSSGRRCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFSGDLHSN 243
              GR+C HC  EKTPQWRAGP GPKTLCNACGVRYKSGRL+PEYRPA+SPTFS  LHSN
Sbjct: 176 ---GRKCQHCGVEKTPQWRAGPDGPKTLCNACGVRYKSGRLVPEYRPANSPTFSSKLHSN 232

Query: 242 SHRKVLDMRKQKQ 204
           SHRKV++MR+QKQ
Sbjct: 233 SHRKVVEMRRQKQ 245


>ref|XP_004150343.1| PREDICTED: GATA transcription factor 1-like [Cucumis sativus]
           gi|449514819|ref|XP_004164489.1| PREDICTED: GATA
           transcription factor 1-like [Cucumis sativus]
          Length = 287

 Score =  170 bits (431), Expect = 4e-40
 Identities = 112/291 (38%), Positives = 148/291 (50%), Gaps = 61/291 (20%)
 Frame = -1

Query: 872 METAALSIDNLLDFSSDIGXXXXXXXXXXXXHPLGVNNNHHNTELTHSESVPQHLL---- 705
           ME++   +D+LLDFSSDIG             P  V     +T    S  +    +    
Sbjct: 1   MESSLAFMDDLLDFSSDIGEEDEEDDAVP---PFSVKPKSSSTTAPDSSDLNAAAMHPDD 57

Query: 704 -----------VEEELEWLSNQDAFPQIEMF-DILPMKPNNNVP---------KNQSPIS 588
                       EEELEWLSN+DAFP +E F DIL    +++ P         K  SP+S
Sbjct: 58  SSSCRVLPEEYAEEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLPSVSKQNSPVS 117

Query: 587 VL--------------GNSDSI------------IRIPVQAXXXXXXXXXXXXSDFAGRQ 486
           VL              GN  S+            +++P +A               +G  
Sbjct: 118 VLESTSISSHGETTNGGNKTSVHSSSILMSCCGSLKVPSKARSKRRRGRH-----ISGHH 172

Query: 485 WWYQYEPKKKS----VGVTRMAGMANSS------GRRCLHCQSEKTPQWRAGPLGPKTLC 336
             ++ +P  K+    V  T  A +  ++      GR+CLHC +EKTPQWRAGP GPKTLC
Sbjct: 173 LLFKQQPSSKNLKQVVPTTATAAVVAATTGTAGIGRKCLHCGAEKTPQWRAGPFGPKTLC 232

Query: 335 NACGVRYKSGRLLPEYRPASSPTFSGDLHSNSHRKVLDMRKQKQKDVMFLP 183
           NACGVR+KSGRL+PEYRPASSPTFS +LHSNSHRKV++MR+QKQ  ++  P
Sbjct: 233 NACGVRFKSGRLVPEYRPASSPTFSAELHSNSHRKVMEMRRQKQLGMVVNP 283


>dbj|BAC98492.1| AG-motif binding protein-2 [Nicotiana tabacum]
          Length = 289

 Score =  159 bits (402), Expect = 9e-37
 Identities = 97/198 (48%), Positives = 113/198 (57%), Gaps = 32/198 (16%)
 Frame = -1

Query: 704 VEEELEWLSNQDAFPQIEMFDILPMKPNNNVPKNQSPISVLGNSDSI------------- 564
           VEEELEWLSN+DAFP +E F IL   P+  V  + SP+SVL NS S              
Sbjct: 77  VEEELEWLSNKDAFPAVE-FGILADNPSI-VFDHHSPVSVLENSSSTCNSSGNGSANANA 134

Query: 563 -----------IRIPVQAXXXXXXXXXXXXS-DFAGRQWWYQYEPKKKSV-------GVT 441
                      +  PV+A              D          +P  KSV        + 
Sbjct: 135 YMSCCASLKVPVNYPVRARSKRRRRRQRGSFADLPSEHCMSVNKPSFKSVKQREPLLSLP 194

Query: 440 RMAGMANSSGRRCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFS 261
             +  + S GRRC HC ++KTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPA+SPTFS
Sbjct: 195 LNSAKSASIGRRCQHCGADKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPANSPTFS 254

Query: 260 GDLHSNSHRKVLDMRKQK 207
             +HSNSHRKVL+MRKQK
Sbjct: 255 PTVHSNSHRKVLEMRKQK 272


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