BLASTX nr result

ID: Coptis21_contig00021201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021201
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268349.1| PREDICTED: uncharacterized protein LOC100256...    62   1e-07
ref|XP_003549143.1| PREDICTED: uncharacterized protein LOC100801...    61   2e-07
ref|XP_002528055.1| conserved hypothetical protein [Ricinus comm...    60   4e-07
gb|EEC79536.1| hypothetical protein OsI_20642 [Oryza sativa Indi...    59   9e-07
ref|NP_001056054.1| Os05g0517800 [Oryza sativa Japonica Group] g...    58   1e-06

>ref|XP_002268349.1| PREDICTED: uncharacterized protein LOC100256861 [Vitis vinifera]
           gi|147843005|emb|CAN83318.1| hypothetical protein
           VITISV_023581 [Vitis vinifera]
           gi|297744362|emb|CBI37332.3| unnamed protein product
           [Vitis vinifera]
          Length = 76

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/63 (55%), Positives = 37/63 (58%)
 Frame = -2

Query: 541 MALTNFIITXXXXXXXXXXLRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXENIKPKE 362
           MALTNFIIT          LRSDVKQS  IFRRNV+HIR WL           E  KPKE
Sbjct: 1   MALTNFIITVAGVSAVILLLRSDVKQSASIFRRNVRHIRNWLEEESASASKATEKAKPKE 60

Query: 361 LDS 353
           L+S
Sbjct: 61  LES 63


>ref|XP_003549143.1| PREDICTED: uncharacterized protein LOC100801081 [Glycine max]
           gi|255631548|gb|ACU16141.1| unknown [Glycine max]
          Length = 89

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/70 (48%), Positives = 39/70 (55%)
 Frame = +3

Query: 345 GIFESNSLGLIXXXXXXXXXXXXXXQVLICLTLRRKIPTDCFTSLLNRRTTAPTPATVIM 524
           G F+SNSLG+               Q+ +CLTLRRK   DC TSLL RRTTA TPATV  
Sbjct: 5   GTFDSNSLGVDFSIVLDVAAVSSSSQLRMCLTLRRKTEADCLTSLLRRRTTALTPATVST 64

Query: 525 KLVKAIFSLL 554
           K V  +   L
Sbjct: 65  KFVSPMMPSL 74


>ref|XP_002528055.1| conserved hypothetical protein [Ricinus communis]
           gi|223532516|gb|EEF34305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 76

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/63 (53%), Positives = 35/63 (55%)
 Frame = -2

Query: 541 MALTNFIITXXXXXXXXXXLRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXENIKPKE 362
           M LTNFIIT          LRSDVKQS  IFRRNVKHIR W            E  KPKE
Sbjct: 1   MGLTNFIITVAGVSAVVLLLRSDVKQSAAIFRRNVKHIRNWFEEETAASSKASEKAKPKE 60

Query: 361 LDS 353
           L+S
Sbjct: 61  LES 63


>gb|EEC79536.1| hypothetical protein OsI_20642 [Oryza sativa Indica Group]
          Length = 77

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/63 (52%), Positives = 36/63 (57%)
 Frame = -2

Query: 541 MALTNFIITXXXXXXXXXXLRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXENIKPKE 362
           MALTNFI+T          LRSDVKQS  IFRRNV+HIR WL           E   PKE
Sbjct: 1   MALTNFILTVVGVGTAVLLLRSDVKQSASIFRRNVRHIRNWLEEESAAAAKSAERAAPKE 60

Query: 361 LDS 353
           L+S
Sbjct: 61  LES 63


>ref|NP_001056054.1| Os05g0517800 [Oryza sativa Japonica Group]
           gi|46575961|gb|AAT01322.1| unknown protein [Oryza sativa
           Japonica Group] gi|113579605|dbj|BAF17968.1|
           Os05g0517800 [Oryza sativa Japonica Group]
           gi|222632243|gb|EEE64375.1| hypothetical protein
           OsJ_19217 [Oryza sativa Japonica Group]
          Length = 77

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/63 (52%), Positives = 36/63 (57%)
 Frame = -2

Query: 541 MALTNFIITXXXXXXXXXXLRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXENIKPKE 362
           MALTNFI+T          LRSDVKQS  IFRRNV+HIR WL           E   PKE
Sbjct: 1   MALTNFILTVVGVGTAVLLLRSDVKQSASIFRRNVRHIRKWLEEESAAAAKPAERAAPKE 60

Query: 361 LDS 353
           L+S
Sbjct: 61  LES 63


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