BLASTX nr result

ID: Coptis21_contig00021196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021196
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO...   222   3e-56
ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|2...   220   8e-56
emb|CBI39720.3| unnamed protein product [Vitis vinifera]              216   2e-54
ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO...   216   2e-54
gb|AAK21002.1| AtSPO11-1 [Arabidopsis thaliana]                       208   3e-52

>ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max]
          Length = 367

 Score =  222 bits (565), Expect = 3e-56
 Identities = 102/126 (80%), Positives = 114/126 (90%)
 Frame = -2

Query: 378 GRGYPDVSTRRFLRLLIEELALPAYCLVDCDPYGFDILAIYRFGSMEMAYDAKLLSVPEI 199
           GRGYPD+ TRRFLRLL+E L LPAYCLVDCDPYGFDIL  YRFGSM+MAYD K L VPEI
Sbjct: 219 GRGYPDIPTRRFLRLLVENLCLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEI 278

Query: 198 RWLGAFPSDSDKYLLPEQCLLPLTAEDKRKAEAILLRCYLQQEVPQWRLELEAMLQRGVK 19
           +WLGAFPSDS++Y +P QCLLPLTAEDKRK EA+LLRCYL++EVPQWRLEL+ +LQRGVK
Sbjct: 279 QWLGAFPSDSERYFVPNQCLLPLTAEDKRKVEAMLLRCYLEREVPQWRLELQLILQRGVK 338

Query: 18  FEIEAL 1
           FEIEAL
Sbjct: 339 FEIEAL 344


>ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|222847634|gb|EEE85181.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  220 bits (561), Expect = 8e-56
 Identities = 100/125 (80%), Positives = 114/125 (91%)
 Frame = -2

Query: 378 GRGYPDVSTRRFLRLLIEELALPAYCLVDCDPYGFDILAIYRFGSMEMAYDAKLLSVPEI 199
           GRGYPD+ TRRFLRLL+E+L LP YCLVDCDPYGFDIL  YRFGSM+MAYDAK+L VPE+
Sbjct: 210 GRGYPDIPTRRFLRLLVEKLCLPVYCLVDCDPYGFDILTTYRFGSMQMAYDAKILRVPEV 269

Query: 198 RWLGAFPSDSDKYLLPEQCLLPLTAEDKRKAEAILLRCYLQQEVPQWRLELEAMLQRGVK 19
           +WLGAFPSD +KY LP+QCLLPLTAEDKR+ E +LLRCYLQ+EVP+WRLELE MLQ+GVK
Sbjct: 270 QWLGAFPSDFEKYDLPQQCLLPLTAEDKRRTETMLLRCYLQKEVPEWRLELELMLQKGVK 329

Query: 18  FEIEA 4
           FEIEA
Sbjct: 330 FEIEA 334


>emb|CBI39720.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  216 bits (550), Expect = 2e-54
 Identities = 104/126 (82%), Positives = 110/126 (87%)
 Frame = -2

Query: 378 GRGYPDVSTRRFLRLLIEELALPAYCLVDCDPYGFDILAIYRFGSMEMAYDAKLLSVPEI 199
           GRGYPD+ TRRFLRLL+E+L L  YCLVDCDPYGFDIL  YRFGSM+MAYDAK L VPEI
Sbjct: 267 GRGYPDIPTRRFLRLLVEKLHLHVYCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRVPEI 326

Query: 198 RWLGAFPSDSDKYLLPEQCLLPLTAEDKRKAEAILLRCYLQQEVPQWRLELEAMLQRGVK 19
            WLGAFPSDS+KY LPE CLLPLTAEDKRK EAIL RCYLQQE+  WRLELE MLQRGVK
Sbjct: 327 EWLGAFPSDSEKYGLPEPCLLPLTAEDKRKTEAILHRCYLQQELLHWRLELELMLQRGVK 386

Query: 18  FEIEAL 1
           FEIEAL
Sbjct: 387 FEIEAL 392


>ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
           vinifera]
          Length = 361

 Score =  216 bits (550), Expect = 2e-54
 Identities = 104/126 (82%), Positives = 110/126 (87%)
 Frame = -2

Query: 378 GRGYPDVSTRRFLRLLIEELALPAYCLVDCDPYGFDILAIYRFGSMEMAYDAKLLSVPEI 199
           GRGYPD+ TRRFLRLL+E+L L  YCLVDCDPYGFDIL  YRFGSM+MAYDAK L VPEI
Sbjct: 213 GRGYPDIPTRRFLRLLVEKLHLHVYCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRVPEI 272

Query: 198 RWLGAFPSDSDKYLLPEQCLLPLTAEDKRKAEAILLRCYLQQEVPQWRLELEAMLQRGVK 19
            WLGAFPSDS+KY LPE CLLPLTAEDKRK EAIL RCYLQQE+  WRLELE MLQRGVK
Sbjct: 273 EWLGAFPSDSEKYGLPEPCLLPLTAEDKRKTEAILHRCYLQQELLHWRLELELMLQRGVK 332

Query: 18  FEIEAL 1
           FEIEAL
Sbjct: 333 FEIEAL 338


>gb|AAK21002.1| AtSPO11-1 [Arabidopsis thaliana]
          Length = 362

 Score =  208 bits (530), Expect = 3e-52
 Identities = 95/126 (75%), Positives = 114/126 (90%)
 Frame = -2

Query: 378 GRGYPDVSTRRFLRLLIEELALPAYCLVDCDPYGFDILAIYRFGSMEMAYDAKLLSVPEI 199
           GRGYPDVSTRRFLRLL+E+L LP +CLVDCDPYGF+ILA YRFGSM+MAYD + L  P++
Sbjct: 213 GRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQMAYDIESLRAPDM 272

Query: 198 RWLGAFPSDSDKYLLPEQCLLPLTAEDKRKAEAILLRCYLQQEVPQWRLELEAMLQRGVK 19
           +WLGAFPSDS+ Y +P+QCLLPLT EDK++ EA+LLRCYL++E+PQWRLELE ML+RGVK
Sbjct: 273 KWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQWRLELETMLKRGVK 332

Query: 18  FEIEAL 1
           FEIEAL
Sbjct: 333 FEIEAL 338


Top