BLASTX nr result

ID: Coptis21_contig00021193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021193
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_003632942.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   210   2e-52
ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|2...   209   4e-52
gb|AAO42272.1| unknown protein [Arabidopsis thaliana]                 208   5e-52
ref|XP_003529639.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   208   5e-52

>ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|222859606|gb|EEE97153.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/154 (66%), Positives = 124/154 (80%), Gaps = 10/154 (6%)
 Frame = -3

Query: 594 GSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQPGEDCYQPNNVKNH 415
           GSG+FLA DTTNQTYC+ MDGVDSK+LQAALDWACGPG++NCSEIQPGE+CYQPNNVKNH
Sbjct: 312 GSGTFLANDTTNQTYCIVMDGVDSKTLQAALDWACGPGQANCSEIQPGENCYQPNNVKNH 371

Query: 414 ASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFAGSKKQINKTKIESPSTNSTS 235
           ASYAFDSYYQK+GR+A SCDFKGVAMITTTDPSHG+CIF GSKK  NKT+    +T + S
Sbjct: 372 ASYAFDSYYQKEGRAAGSCDFKGVAMITTTDPSHGSCIFPGSKKITNKTR-TVVNTTTPS 430

Query: 234 NA----------QSRLSGGTQGFKAFIILLMTLI 163
           NA           SR+S   +  +AF+ ++ +++
Sbjct: 431 NAAGGSRLISFRSSRISAMDKALQAFLTIIFSIL 464


>ref|XP_003632942.1| PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Vitis vinifera]
          Length = 525

 Score =  210 bits (534), Expect = 2e-52
 Identities = 100/145 (68%), Positives = 117/145 (80%), Gaps = 8/145 (5%)
 Frame = -3

Query: 594 GSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQPGEDCYQPNNVKNH 415
           GSG+FLA DTTNQT+C+AMDGVD+++LQAALDWACGPGR+NCSEIQPGE CYQPNNVKNH
Sbjct: 370 GSGTFLANDTTNQTFCIAMDGVDARTLQAALDWACGPGRANCSEIQPGEGCYQPNNVKNH 429

Query: 414 ASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFAGSKKQINKTKIESPSTNSTS 235
           ASYAFDSYYQK+GR + SCDFKGVAMITTTDPSHG+CIF GSKK  NKTK     T ++ 
Sbjct: 430 ASYAFDSYYQKEGRGSGSCDFKGVAMITTTDPSHGSCIFPGSKKISNKTKEAINGTEASG 489

Query: 234 NA--------QSRLSGGTQGFKAFI 184
            A         S+++ G+  F AF+
Sbjct: 490 AAVQLRLVTVGSQINKGSHIFWAFV 514


>ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|222832811|gb|EEE71288.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  209 bits (531), Expect = 4e-52
 Identities = 96/153 (62%), Positives = 119/153 (77%), Gaps = 9/153 (5%)
 Frame = -3

Query: 594 GSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQPGEDCYQPNNVKNH 415
           GSG+FLA DTTNQTYC+ MDGVDSK+LQAALDW CGPGR+NCSEIQPGE+CYQPNNVKNH
Sbjct: 312 GSGTFLANDTTNQTYCIVMDGVDSKTLQAALDWVCGPGRANCSEIQPGENCYQPNNVKNH 371

Query: 414 ASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFAGSKKQINKTKIESPSTNSTS 235
           ASYAFDSYYQK+GR++ SCDFKG+AM TTTDPSHG+CIF GSKK  NK +    +TN ++
Sbjct: 372 ASYAFDSYYQKEGRASGSCDFKGIAMTTTTDPSHGSCIFPGSKKITNKARTVVNTTNPSN 431

Query: 234 NA---------QSRLSGGTQGFKAFIILLMTLI 163
            A          SR+S   +  +  + ++ +++
Sbjct: 432 AAGGSRLISFKSSRMSAVDKALQTLLTVIFSIL 464


>gb|AAO42272.1| unknown protein [Arabidopsis thaliana]
          Length = 332

 Score =  208 bits (530), Expect = 5e-52
 Identities = 101/143 (70%), Positives = 119/143 (83%), Gaps = 1/143 (0%)
 Frame = -3

Query: 594 GSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQPGEDCYQPNNVKNH 415
           GSG+FLA DTTNQTYC+AMDGVD+K+LQAALDWACGPGRSNCSEIQPGE CYQPNNVK H
Sbjct: 188 GSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGH 247

Query: 414 ASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFAGSKKQINKTKIESPSTN-ST 238
           AS+AF+SYYQK+GR++ SCDFKGVAMITTTDPSHG+CIF GSKK  N+T+    ST  + 
Sbjct: 248 ASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRTQTVVNSTEVAA 307

Query: 237 SNAQSRLSGGTQGFKAFIILLMT 169
             A SR    ++GF   I++L+T
Sbjct: 308 GEATSR--SLSRGFCVTIMILVT 328


>ref|XP_003529639.1| PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Glycine max]
          Length = 523

 Score =  208 bits (530), Expect = 5e-52
 Identities = 97/126 (76%), Positives = 110/126 (87%)
 Frame = -3

Query: 594 GSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQPGEDCYQPNNVKNH 415
           G G+FLA DTTNQTYC+AMDG DSK+LQAALDWACGPGR+NCSEIQPGE C+QPNNVKNH
Sbjct: 366 GIGTFLANDTTNQTYCIAMDGFDSKTLQAALDWACGPGRANCSEIQPGESCFQPNNVKNH 425

Query: 414 ASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFAGSKKQINKTKIESPSTNSTS 235
           ASYAFDSYYQK+G++  SCDFKGVAMITTTDPSHG+CIF GSKK  NKTK E  ++  +S
Sbjct: 426 ASYAFDSYYQKEGKAQGSCDFKGVAMITTTDPSHGSCIFPGSKKVSNKTK-EVVNSTISS 484

Query: 234 NAQSRL 217
           NA  +L
Sbjct: 485 NAGEKL 490


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