BLASTX nr result

ID: Coptis21_contig00021188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021188
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284749.2| PREDICTED: ethylene-responsive transcription...    88   6e-16
emb|CBI16240.3| unnamed protein product [Vitis vinifera]               88   6e-16
dbj|BAL04981.1| homeotic APETALA2 protein [Nymphaea hybrid culti...    82   6e-14
ref|XP_002326164.1| AP2 domain-containing transcription factor [...    80   2e-13
emb|CAR92295.1| relative to APETALA2 1 [Solanum tuberosum subsp....    79   5e-13

>ref|XP_002284749.2| PREDICTED: ethylene-responsive transcription factor RAP2-7-like
           [Vitis vinifera]
          Length = 500

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -2

Query: 237 AYDKAAIKCNGREAVTNFEPSTYENE-IPESENGGDACNLDLNLGISPPFSADDPNKIES 61
           AYDKAAIKCNGREAVTNFEPSTYE E IPE+ N G   NLDLNLGISPP S + P +I+ 
Sbjct: 291 AYDKAAIKCNGREAVTNFEPSTYEGEMIPEASNEGSDHNLDLNLGISPPLS-NGPKEIDG 349

Query: 60  VAAFRLHVDPLNMPNSMKS 4
           +   + H    +  N  +S
Sbjct: 350 LGHLQFHSGSHDAHNGRRS 368


>emb|CBI16240.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -2

Query: 237 AYDKAAIKCNGREAVTNFEPSTYENE-IPESENGGDACNLDLNLGISPPFSADDPNKIES 61
           AYDKAAIKCNGREAVTNFEPSTYE E IPE+ N G   NLDLNLGISPP S + P +I+ 
Sbjct: 269 AYDKAAIKCNGREAVTNFEPSTYEGEMIPEASNEGSDHNLDLNLGISPPLS-NGPKEIDG 327

Query: 60  VAAFRLHVDPLNMPNSMKS 4
           +   + H    +  N  +S
Sbjct: 328 LGHLQFHSGSHDAHNGRRS 346


>dbj|BAL04981.1| homeotic APETALA2 protein [Nymphaea hybrid cultivar]
          Length = 450

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/80 (56%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -2

Query: 237 AYDKAAIKCNGREAVTNFEPSTYENE-IPESENGGDACNLDLNLGISPPFSADDPNKIES 61
           AYDKAAIKCNGR+AVTNFEPS+YE E + E + GG   NLDLNLGISPP  +       S
Sbjct: 241 AYDKAAIKCNGRDAVTNFEPSSYEVELLAEGDEGGATDNLDLNLGISPPVCSHASKVDNS 300

Query: 60  VAAFRLHVDPLNMPNSMKSR 1
             AFRL        +  KSR
Sbjct: 301 STAFRLQCGNFESSDLNKSR 320


>ref|XP_002326164.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222833357|gb|EEE71834.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 496

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/53 (75%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = -2

Query: 237 AYDKAAIKCNGREAVTNFEPSTYENEIPESENGGDA-CNLDLNLGISPPFSAD 82
           AYDKAAIKCNGREAVTNFEPSTYE EI    N GD   NLDLNLGI+PP ++D
Sbjct: 294 AYDKAAIKCNGREAVTNFEPSTYEGEILSEPNNGDGNQNLDLNLGIAPPDTSD 346


>emb|CAR92295.1| relative to APETALA2 1 [Solanum tuberosum subsp. andigenum]
          Length = 454

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = -2

Query: 237 AYDKAAIKCNGREAVTNFEPSTYENEI-PESENGGDACNLDLNLGISPPFSADD 79
           AYDKAAIKCNGREAVTNFE S YE E+  E++NGG   NLDLNLGI+P  SADD
Sbjct: 258 AYDKAAIKCNGREAVTNFELSAYEGELSTEADNGGADHNLDLNLGIAPSVSADD 311


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