BLASTX nr result

ID: Coptis21_contig00021184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021184
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527173.1| conserved hypothetical protein [Ricinus comm...   109   3e-22
ref|XP_004139297.1| PREDICTED: TBC1 domain family member 15-like...   105   4e-21
ref|XP_003542634.1| PREDICTED: TBC1 domain family member 15-like...   103   1e-20
emb|CBI28236.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002285365.1| PREDICTED: GTPase-activating protein gyp7-li...   103   2e-20

>ref|XP_002527173.1| conserved hypothetical protein [Ricinus communis]
           gi|223533438|gb|EEF35186.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 645

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/78 (75%), Positives = 65/78 (83%), Gaps = 3/78 (3%)
 Frame = +1

Query: 1   DSDYAASQQQQELRSVVRT---NSGKKIVESEPEGAEVVFLKDNVTIHPTQFASERISGR 171
           D+DYAAS QQ    SV+ T   +S K+   SEPEGAEVV+LKDNVTIHPTQFASERISGR
Sbjct: 12  DADYAASIQQGSA-SVMMTRSDSSSKRSTSSEPEGAEVVYLKDNVTIHPTQFASERISGR 70

Query: 172 LRLIKQASSLFMTWIPYK 225
           L+LIKQASSLFMTWIPYK
Sbjct: 71  LKLIKQASSLFMTWIPYK 88


>ref|XP_004139297.1| PREDICTED: TBC1 domain family member 15-like [Cucumis sativus]
          Length = 655

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = +1

Query: 1   DSDYAASQQQQELRSVVRTNSGKKIVESEPEGAEVVFLKDNVTIHPTQFASERISGRLRL 180
           D+DYAASQQQ    +++RT+SG+    SE EGAEVV+ K+NVTIHPTQFASERISGRLRL
Sbjct: 12  DADYAASQQQGST-TMMRTDSGRGSSSSEHEGAEVVYSKENVTIHPTQFASERISGRLRL 70

Query: 181 IKQASSLFMTWIPYK 225
           IKQ S LF+TWIPYK
Sbjct: 71  IKQGSCLFITWIPYK 85


>ref|XP_003542634.1| PREDICTED: TBC1 domain family member 15-like [Glycine max]
          Length = 656

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +1

Query: 1   DSDYAASQQQQELRSVVRTNSGKKIVESEPEGAEVVFLKDNVTIHPTQFASERISGRLRL 180
           D+DYAASQQQ     ++R++S K+   S  EGAE+VFLKDNV IHPTQFASERISGRL+L
Sbjct: 12  DADYAASQQQGSASVMLRSDSAKQ--SSPREGAEIVFLKDNVAIHPTQFASERISGRLKL 69

Query: 181 IKQASSLFMTWIPYK 225
           IKQ+SSL MTWIPYK
Sbjct: 70  IKQSSSLSMTWIPYK 84


>emb|CBI28236.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/75 (70%), Positives = 60/75 (80%)
 Frame = +1

Query: 1   DSDYAASQQQQELRSVVRTNSGKKIVESEPEGAEVVFLKDNVTIHPTQFASERISGRLRL 180
           D+DYAASQ Q    S  R+ S K+   SE +GAE+V+ KDNVTIHPTQ+ASERISGRLRL
Sbjct: 12  DADYAASQLQGSA-SFSRSGSSKRSSSSESDGAEIVYSKDNVTIHPTQYASERISGRLRL 70

Query: 181 IKQASSLFMTWIPYK 225
           IKQ SSLFMTWIPYK
Sbjct: 71  IKQGSSLFMTWIPYK 85


>ref|XP_002285365.1| PREDICTED: GTPase-activating protein gyp7-like [Vitis vinifera]
          Length = 657

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/75 (70%), Positives = 60/75 (80%)
 Frame = +1

Query: 1   DSDYAASQQQQELRSVVRTNSGKKIVESEPEGAEVVFLKDNVTIHPTQFASERISGRLRL 180
           D+DYAASQ Q    S  R+ S K+   SE +GAE+V+ KDNVTIHPTQ+ASERISGRLRL
Sbjct: 12  DADYAASQLQGSA-SFSRSGSSKRSSSSESDGAEIVYSKDNVTIHPTQYASERISGRLRL 70

Query: 181 IKQASSLFMTWIPYK 225
           IKQ SSLFMTWIPYK
Sbjct: 71  IKQGSSLFMTWIPYK 85


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