BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021165
         (1594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...   600   e-169
gb|EEC78508.1| hypothetical protein OsI_18438 [Oryza sativa Indi...   568   e-159
ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group] g...   565   e-159
ref|XP_002440585.1| hypothetical protein SORBIDRAFT_09g003510 [S...   560   e-157
ref|XP_002526972.1| pentatricopeptide repeat-containing protein,...   558   e-156

>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial [Vitis vinifera]
            gi|296087577|emb|CBI34833.3| unnamed protein product
            [Vitis vinifera]
          Length = 445

 Score =  600 bits (1548), Expect = e-169
 Identities = 298/447 (66%), Positives = 362/447 (80%), Gaps = 1/447 (0%)
 Frame = +3

Query: 90   LKKSIHLVLSGHCQTLKRVLVTNRTFSSATAPTEEEYARRNYARNLPEYNTVISSLTFQR 269
            +KK + +V    C  L R L   R F+++T    EEYA+RNYA N+ EY TV+SSLT QR
Sbjct: 1    MKKLLQIVAGQRCSPLLRAL-GRRYFAAST----EEYAKRNYASNVSEYTTVVSSLTAQR 55

Query: 270  KDFLLRDAYEDMVLDGVKPDIDTFHSLLVGTMKGARLQDAFFFRDEMKAMGLFPDVPSYN 449
            + FLLRDAY+DM+LDGV+P  D FHSL+VGTMKGARLQD+FFF D+MK MGL PDV  YN
Sbjct: 56   RHFLLRDAYDDMMLDGVQPSRDIFHSLIVGTMKGARLQDSFFFIDQMKTMGLVPDVALYN 115

Query: 450  FLISTCGKCKHSDAAIQILEEMKNNGVKPNGQTYICLLNACAATGRLDQVYAIVRDMTAA 629
            FL+STCGKCK+SD AI ILEEMK N VKP GQTYICLLNACAA+GR D+VYAIVRDMTAA
Sbjct: 116  FLVSTCGKCKNSDQAIHILEEMKKNEVKPTGQTYICLLNACAASGRTDRVYAIVRDMTAA 175

Query: 630  GLGLNKFCYAGLVAAHVNRTPRTEETLTKIIDLVEQSKGWSSVEGANDTAENVMIGVSEE 809
            GLGLNKFCYAGL+AAH N+ P T++T +KII+LVEQSKGWSS+E   D AENVM+GVSEE
Sbjct: 176  GLGLNKFCYAGLIAAHKNKIPLTDDTASKIIELVEQSKGWSSIEATRDMAENVMMGVSEE 235

Query: 810  ELYNVPTAEFVHRRGGFVFRDLTVYHVALLACADLQSIETMERLLDMLAKDRKTPDIFIV 989
            ELYN+PTAE+VHRR GF+ R LTVYHVAL A ADL+++E ME LL+ML K+ KTPD+F++
Sbjct: 236  ELYNIPTAEYVHRRAGFLNRQLTVYHVALHAFADLRNVEAMETLLEMLKKEGKTPDVFLI 295

Query: 990  IQTMRCYLCCGDLERGLKTFEDYI-SERPPVVELYVALMEGAMVGHTERGMQIALDTLEK 1166
            +QTMRCYL  G+++RGL+ FE+Y+ S +P +VELYV L+EGAMVG+T +GM++A DTL K
Sbjct: 296  MQTMRCYLHSGNIDRGLQIFEEYMNSGKPAMVELYVTLVEGAMVGYTPKGMELAQDTLVK 355

Query: 1167 MTSRGFFLNYKMGSDLLLAASGEKDGGYTTANYIWDLMQERKLNLSLPALQAYYKGLMDR 1346
            M +RGFFL+ +MGS+LLL ASGEK GGYTTANYIWDLMQ RK+  S PA++AYY GL +R
Sbjct: 356  MNARGFFLSPRMGSELLLVASGEKTGGYTTANYIWDLMQARKITPSFPAVEAYYNGLRER 415

Query: 1347 DIAKDDPRLLHVSSKLDGARTRFNRGP 1427
            +I +DD RL+ VS   D  R RF  GP
Sbjct: 416  EIPEDDARLVLVSRAYDNQRLRFGTGP 442


>gb|EEC78508.1| hypothetical protein OsI_18438 [Oryza sativa Indica Group]
          Length = 454

 Score =  568 bits (1463), Expect = e-159
 Identities = 277/413 (67%), Positives = 338/413 (81%), Gaps = 1/413 (0%)
 Frame = +3

Query: 180  APTEEEYARRNYARNLPEYNTVISSLTFQRKDFLLRDAYEDMVLDGVKPDIDTFHSLLVG 359
            A + EEY RRNYA+N+ EYNTV  SLT QR+ +LLRDAY+DM+LDGV+P  DTFH+L+VG
Sbjct: 33   ATSTEEYNRRNYAKNISEYNTVFGSLTAQRRHYLLRDAYDDMMLDGVQPVRDTFHNLIVG 92

Query: 360  TMKGARLQDAFFFRDEMKAMGLFPDVPSYNFLISTCGKCKHSDAAIQILEEMKNNGVKPN 539
             MKG+RLQDAF+FRD+MK MGL PDV  YNFLISTCGK K+SDAAI +LEEMK +GVK  
Sbjct: 93   AMKGSRLQDAFYFRDQMKEMGLQPDVNLYNFLISTCGKSKNSDAAIMLLEEMKAHGVKLK 152

Query: 540  GQTYICLLNACAATGRLDQVYAIVRDMTAAGLGLNKFCYAGLVAAHVNRTPRTEETLTKI 719
            G+TY+CLLNA AATGR DQVYAIVRDMTAAGLGLNKFCYAGL+ A  N+ P TEET+TKI
Sbjct: 153  GETYVCLLNALAATGRTDQVYAIVRDMTAAGLGLNKFCYAGLITAFKNKAPTTEETMTKI 212

Query: 720  IDLVEQSKGWSSVEG-ANDTAENVMIGVSEEELYNVPTAEFVHRRGGFVFRDLTVYHVAL 896
            ++ V+QSKGW +VE  + D++EN+M+ VSEEELYN+PTAE+VHR+  FV++ +T+YHVA+
Sbjct: 213  VEFVQQSKGWKNVERVSKDSSENIMMNVSEEELYNLPTAEYVHRQ-AFVYKQMTIYHVAI 271

Query: 897  LACADLQSIETMERLLDMLAKDRKTPDIFIVIQTMRCYLCCGDLERGLKTFEDYISERPP 1076
             ACADL+S ET+E LLDML KD  T D FI +Q MRCYL CGD++  +K FE+Y S + P
Sbjct: 272  HACADLKSKETLEVLLDMLIKDGFTYDAFIAMQAMRCYLQCGDIDSAVKIFEEYTSSKSP 331

Query: 1077 VVELYVALMEGAMVGHTERGMQIALDTLEKMTSRGFFLNYKMGSDLLLAASGEKDGGYTT 1256
              ELYV L EGAM+GHT RGMQ+A +T+EKMTSR FFLN +MG+DLLLAASGEK GGYT 
Sbjct: 332  PAELYVTLAEGAMIGHTPRGMQLAQETIEKMTSRNFFLNARMGTDLLLAASGEKTGGYTI 391

Query: 1257 ANYIWDLMQERKLNLSLPALQAYYKGLMDRDIAKDDPRLLHVSSKLDGARTRF 1415
            ANY+WDLMQ R++  SLPA++AYYKGL +R+I  DDPRL++VS  LD    RF
Sbjct: 392  ANYVWDLMQNRRITPSLPAVEAYYKGLKEREIPSDDPRLMNVSRVLDNLSIRF 444


>ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group] gi|51038158|gb|AAT93961.1|
            unknow protein [Oryza sativa Japonica Group]
            gi|51038198|gb|AAT94001.1| unkonw protein [Oryza sativa
            Japonica Group] gi|113578184|dbj|BAF16547.1| Os05g0145600
            [Oryza sativa Japonica Group]
            gi|215686674|dbj|BAG88927.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222630177|gb|EEE62309.1|
            hypothetical protein OsJ_17098 [Oryza sativa Japonica
            Group]
          Length = 454

 Score =  565 bits (1457), Expect = e-159
 Identities = 277/413 (67%), Positives = 336/413 (81%), Gaps = 1/413 (0%)
 Frame = +3

Query: 180  APTEEEYARRNYARNLPEYNTVISSLTFQRKDFLLRDAYEDMVLDGVKPDIDTFHSLLVG 359
            A + EEY RRNYA N+ EYNTV  SLT QR+ +LLRDAY+DM+LDGV+P  DTFH+L+VG
Sbjct: 33   ATSTEEYNRRNYANNISEYNTVFGSLTAQRRHYLLRDAYDDMMLDGVQPVRDTFHNLIVG 92

Query: 360  TMKGARLQDAFFFRDEMKAMGLFPDVPSYNFLISTCGKCKHSDAAIQILEEMKNNGVKPN 539
             MKG+RLQDAF+FRD+MK MGL PDV  YNFLISTCGK K+SDAAI +LEEMK +GVK  
Sbjct: 93   AMKGSRLQDAFYFRDQMKEMGLQPDVNLYNFLISTCGKSKNSDAAIMLLEEMKAHGVKLK 152

Query: 540  GQTYICLLNACAATGRLDQVYAIVRDMTAAGLGLNKFCYAGLVAAHVNRTPRTEETLTKI 719
            G+TY CLLNA AATGR DQVYAIVRDMTAAGLGLNKFCYAGL+ A  N+ P TEET+TKI
Sbjct: 153  GETYTCLLNALAATGRTDQVYAIVRDMTAAGLGLNKFCYAGLITAFKNKAPTTEETMTKI 212

Query: 720  IDLVEQSKGWSSVEG-ANDTAENVMIGVSEEELYNVPTAEFVHRRGGFVFRDLTVYHVAL 896
            ++ V+QSKGW +VE  + D++EN+M+ VSEEELYN+PTAE+VHR+  FV++ +T+YHVA+
Sbjct: 213  VEFVQQSKGWKNVERVSKDSSENIMMNVSEEELYNLPTAEYVHRQ-AFVYKQMTIYHVAI 271

Query: 897  LACADLQSIETMERLLDMLAKDRKTPDIFIVIQTMRCYLCCGDLERGLKTFEDYISERPP 1076
             ACADL+S ET+E LLDML KD  T D FI +Q MRCYL CGD++  +K FE+Y S + P
Sbjct: 272  HACADLKSKETLEVLLDMLIKDGFTYDAFIAMQAMRCYLQCGDIDSAVKIFEEYTSSKSP 331

Query: 1077 VVELYVALMEGAMVGHTERGMQIALDTLEKMTSRGFFLNYKMGSDLLLAASGEKDGGYTT 1256
              ELYV L EGAM+GHT RGMQ+A +T+EKMTSR FFLN +MG+DLLLAASGEK GGYT 
Sbjct: 332  PAELYVTLAEGAMIGHTPRGMQLAQETIEKMTSRNFFLNARMGTDLLLAASGEKTGGYTI 391

Query: 1257 ANYIWDLMQERKLNLSLPALQAYYKGLMDRDIAKDDPRLLHVSSKLDGARTRF 1415
            ANY+WDLMQ R++  SLPA++AYYKGL +R+I  DDPRL++VS  LD    RF
Sbjct: 392  ANYVWDLMQNRRITPSLPAVEAYYKGLKEREIPSDDPRLMNVSRVLDNLSIRF 444


>ref|XP_002440585.1| hypothetical protein SORBIDRAFT_09g003510 [Sorghum bicolor]
            gi|241945870|gb|EES19015.1| hypothetical protein
            SORBIDRAFT_09g003510 [Sorghum bicolor]
          Length = 452

 Score =  560 bits (1443), Expect = e-157
 Identities = 285/447 (63%), Positives = 347/447 (77%), Gaps = 4/447 (0%)
 Frame = +3

Query: 87   MLKKSIHLVLSGHCQTLKRVLVTNRTFSSATAPTEEEYARRNYARNLPEYNTVISSLTFQ 266
            +LK S  LVL G  +      +      +ATA   EEYARRNYA N  EYNTVI SL  Q
Sbjct: 3    LLKNS--LVLQGRLRHAAAAALFTARRGAATAT--EEYARRNYADNTSEYNTVIGSLVAQ 58

Query: 267  RKDFLLRDAYEDMVLDGVKPDIDTFHSLLVGTMKGARLQDAFFFRDEMKAMGLFPDVPSY 446
            R+ +LLRDAY+DM+LDGVKP+ DTFH+L+VGTMKG+RLQDA +FRD+MK MGL PDV  Y
Sbjct: 59   RRPYLLRDAYDDMMLDGVKPERDTFHTLIVGTMKGSRLQDALYFRDQMKEMGLQPDVNLY 118

Query: 447  NFLISTCGKCKHSDAAIQILEEMKNNGVKPNGQTYICLLNACAATGRLDQVYAIVRDMTA 626
            NFLISTCGKCK+SDAAI +LEEMK +GVK  G+TYICLLNA A+TG+ DQVYAIV DM+A
Sbjct: 119  NFLISTCGKCKNSDAAIMLLEEMKAHGVKLKGETYICLLNALASTGQTDQVYAIVSDMSA 178

Query: 627  AGLGLNKFCYAGLVAAHVNRTPRTEETLTKIIDLVEQSKGWSSVE-GANDTAENVMIGVS 803
            AGLGLNKFCYAGL+ A  N+TP TEET+ KI+D V QSKGW  VE  A D+AEN+M+ VS
Sbjct: 179  AGLGLNKFCYAGLITAFKNKTPTTEETMAKILDFVGQSKGWQYVERAAKDSAENIMMNVS 238

Query: 804  EEELYNVPTAEFVHRRGGFVFRDLTVYHVALLACADLQSIETMERLLDMLAKDRK---TP 974
            EEELYN+PTAE+V+RRGGFVF+  TVYHVA+ ACA+L+S ET+E LL+M  KD +   T 
Sbjct: 239  EEELYNLPTAEYVNRRGGFVFKQHTVYHVAIHACAELRSKETLEALLEMFNKDNRDGSTY 298

Query: 975  DIFIVIQTMRCYLCCGDLERGLKTFEDYISERPPVVELYVALMEGAMVGHTERGMQIALD 1154
            D ++V+Q MRCYL CGD +  +K FE+Y+S R P VELY  L EGAM+G+T RGMQ+A +
Sbjct: 299  DAYMVMQAMRCYLRCGDFDSAVKMFEEYLSSRSPPVELYATLAEGAMIGYTPRGMQLAQE 358

Query: 1155 TLEKMTSRGFFLNYKMGSDLLLAASGEKDGGYTTANYIWDLMQERKLNLSLPALQAYYKG 1334
            T+EKM SR FFLN ++GSDLLLAA+GE  GGYTTANY+WDL+Q R +   L A++AY+KG
Sbjct: 359  TIEKMVSRNFFLNARLGSDLLLAAAGETTGGYTTANYVWDLLQSRNVTPYLTAVEAYHKG 418

Query: 1335 LMDRDIAKDDPRLLHVSSKLDGARTRF 1415
            LM R+I  DDPRLL+VS  LD  + RF
Sbjct: 419  LMAREIPSDDPRLLNVSRVLDNLQLRF 445


>ref|XP_002526972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533724|gb|EEF35459.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  558 bits (1438), Expect = e-156
 Identities = 271/419 (64%), Positives = 334/419 (79%), Gaps = 1/419 (0%)
 Frame = +3

Query: 171  SATAPTEEEYARRNYARNLPEYNTVISSLTFQRKDFLLRDAYEDMVLDGVKPDIDTFHSL 350
            SA A +  EY +RNYA NL EYNTV+ SL  QR+ FLLR+ Y+DM+LDGV+P  +TF+SL
Sbjct: 65   SAAASSTAEYDKRNYASNLSEYNTVVGSLIAQRRHFLLREVYDDMMLDGVQPSRETFYSL 124

Query: 351  LVGTMKGARLQDAFFFRDEMKAMGLFPDVPSYNFLISTCGKCKHSDAAIQILEEMKNNGV 530
            +VGT+KGARL DAFFFRD+MKAMGL PDV  YNFLISTCGKCK+SD A+QILEEMK N V
Sbjct: 125  IVGTLKGARLSDAFFFRDQMKAMGLLPDVSLYNFLISTCGKCKNSDQAVQILEEMKINEV 184

Query: 531  KPNGQTYICLLNACAATGRLDQVYAIVRDMTAAGLGLNKFCYAGLVAAHVNRTPRTEETL 710
            KPNGQTY+CLLNACAA GRLD+VYAIVRDMTAAG GLNKFCYAGL+AAH+N+ P +++T 
Sbjct: 185  KPNGQTYVCLLNACAAAGRLDRVYAIVRDMTAAGAGLNKFCYAGLIAAHMNKKPLSDDTA 244

Query: 711  TKIIDLVEQSKGWSSVEGANDTAENVMIGVSEEELYNVPTAEFVHRRGGFVFRDLTVYHV 890
             +II+LVEQSKGWSSVE +N  AENVM+G+SEEEL+N+PTA++ HRRG F+ + LTVYH 
Sbjct: 245  KRIIELVEQSKGWSSVESSNYNAENVMMGISEEELFNLPTADYAHRRGAFIIKPLTVYHA 304

Query: 891  ALLACADLQSIETMERLLDMLAKDRKTPDIFIVIQTMRCYLCCGDLERGLKTFEDYI-SE 1067
            A  ACA+L+++E ++ LL+ML KD  +PD+FI +Q MRCYL  GD++ GLK FE+Y+ S 
Sbjct: 305  AFHACAELRNVEAIQTLLEMLKKDGNSPDVFITMQVMRCYLHSGDIDSGLKIFEEYMKSG 364

Query: 1068 RPPVVELYVALMEGAMVGHTERGMQIALDTLEKMTSRGFFLNYKMGSDLLLAASGEKDGG 1247
            +   +ELY  L+EGAMVG+T +GMQ+A DTL  M SR   L  + G+DLLL A+GEK GG
Sbjct: 365  KISGIELYTTLVEGAMVGYTPKGMQLAQDTLVMMGSRNLSLGLRQGNDLLLMAAGEKTGG 424

Query: 1248 YTTANYIWDLMQERKLNLSLPALQAYYKGLMDRDIAKDDPRLLHVSSKLDGARTRFNRG 1424
            YTTANYIWDLM+ RK   SL A++AYY GL +R+I +DDPRLL VS   D  R RF  G
Sbjct: 425  YTTANYIWDLMRARKFTPSLQAVEAYYNGLKEREIPEDDPRLLEVSRIYDNLRVRFGGG 483