BLASTX nr result

ID: Coptis21_contig00021136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021136
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus commun...   356   3e-96
ref|XP_003634835.1| PREDICTED: FAD-dependent oxidoreductase doma...   354   1e-95
emb|CBI35578.3| unnamed protein product [Vitis vinifera]              352   5e-95
ref|XP_004168063.1| PREDICTED: LOW QUALITY PROTEIN: D-amino acid...   347   3e-93
ref|XP_004148947.1| PREDICTED: D-amino acid dehydrogenase small ...   347   3e-93

>ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus communis]
            gi|223533358|gb|EEF35109.1| fad oxidoreductase, putative
            [Ricinus communis]
          Length = 489

 Score =  356 bits (914), Expect = 3e-96
 Identities = 176/301 (58%), Positives = 227/301 (75%), Gaps = 6/301 (1%)
 Frame = +2

Query: 2    YIWMAGKTPGTELWELGMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELS 181
            YIWMA K+P ++ WEL MRS +LW+ LA  I +QG +PL+ LGWK TGSL++GR+ EE  
Sbjct: 116  YIWMAHKSPESDTWELTMRSHKLWKMLADSIHDQGLNPLEVLGWKMTGSLLVGRTPEESE 175

Query: 182  MLKDRVELLSEAGLRAEFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKE 361
            +LK RV+ LSEAGLR E+LS  +L  +EP +  G  GGAAFL DDCQLDA RTV FI+K 
Sbjct: 176  VLKKRVQQLSEAGLRVEYLSSHDLHLQEPAIQVGESGGAAFLPDDCQLDAHRTVAFIEKA 235

Query: 362  NRSYGS--RYVEFFNDPVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKN 535
            NR + +  RY EF++DPVI +LRSS SGE+E V+T KN+LY KKA+V+AAG WSGSLM +
Sbjct: 236  NRYFATKGRYAEFYHDPVISLLRSSSSGEIEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 295

Query: 536  IVEKFHIVLDVPVKPRKGHLLVIENFNSIRLNHGLMEVGYMDHQVA----APSDSGVVDY 703
            +  ++ IV ++PVKPRKGHLLV+E+F S+ LNHG+ME GY+DHQ A      + SG+ D+
Sbjct: 296  LFREYDIVFNIPVKPRKGHLLVLESFGSLTLNHGVMEAGYVDHQGAGVNCTSAVSGLFDH 355

Query: 704  SHTMSISMTATLDGAGNLVLGSSRQFVGFNTDLDESIVDQIWKRAGEFIPSLRDVGLEEL 883
               +S+SMTAT+D  GNLVLGSSR+F GF+T  DESIV  IW RAGEF P L++V L +L
Sbjct: 356  KKNLSVSMTATMDVMGNLVLGSSREFSGFSTQADESIVGHIWNRAGEFFPKLKEVYLGDL 415

Query: 884  S 886
            +
Sbjct: 416  T 416


>ref|XP_003634835.1| PREDICTED: FAD-dependent oxidoreductase domain-containing protein
            1-like [Vitis vinifera]
          Length = 442

 Score =  354 bits (909), Expect = 1e-95
 Identities = 177/299 (59%), Positives = 225/299 (75%), Gaps = 4/299 (1%)
 Frame = +2

Query: 2    YIWMAGKTPGTELWELGMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELS 181
            Y+WM  KTPG+++WEL +RS +LWE LA+ I+EQG +PL+ LGWKKTGSL+IGR+L+E  
Sbjct: 117  YLWMVHKTPGSDIWELSIRSHKLWELLAESIQEQGMNPLEVLGWKKTGSLLIGRTLKESD 176

Query: 182  MLKDRVELLSEAGLRAEFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKE 361
            MLK RV LL EAGL AE+L  S+L+ KEP V    EGGAAFL DDCQLDA  TV FI+K 
Sbjct: 177  MLKRRVNLLVEAGLSAEYLCSSDLLLKEPAVMVEKEGGAAFLPDDCQLDARHTVAFIRKA 236

Query: 362  NRSYGS--RYVEFFNDPVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKN 535
            N  + S  RY EFFNDP   +LRS  +GE+E V+T KN LY KKA+++AAG WSGSL+ +
Sbjct: 237  NEVFASEGRYAEFFNDPATLLLRSGNTGEIEAVQTSKNILYRKKAIIVAAGCWSGSLIHD 296

Query: 536  IVEKFHIVLDVPVKPRKGHLLVIENFNSIRLNHGLMEVGYMDHQVAA--PSDSGVVDYSH 709
            ++    +VLDVPVKPRKGHLLV+ENFN ++L HGLMEVGY +H+V A   + S   D   
Sbjct: 297  LLRNSDVVLDVPVKPRKGHLLVLENFNFLQLKHGLMEVGYANHEVTAQHTTSSASGDQGQ 356

Query: 710  TMSISMTATLDGAGNLVLGSSRQFVGFNTDLDESIVDQIWKRAGEFIPSLRDVGLEELS 886
             +SISMTAT+D  GNLVLGSSRQF GF+T++DE I+D IW+RA  F PSL+++ L + +
Sbjct: 357  ALSISMTATMDTVGNLVLGSSRQFSGFDTNVDEYILDHIWERARVFFPSLKELPLNDFT 415


>emb|CBI35578.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  352 bits (904), Expect = 5e-95
 Identities = 176/299 (58%), Positives = 224/299 (74%), Gaps = 4/299 (1%)
 Frame = +2

Query: 2    YIWMAGKTPGTELWELGMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELS 181
            Y+WM  KTPG+++WEL +RS +LWE LA+ I+EQG +PL+ LGWKKTGSL+IGR+L+E  
Sbjct: 117  YLWMVHKTPGSDIWELSIRSHKLWELLAESIQEQGMNPLEVLGWKKTGSLLIGRTLKESD 176

Query: 182  MLKDRVELLSEAGLRAEFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKE 361
            MLK RV LL EAGL AE+L  S+L+ KEP V    EGGAAFL DDCQLDA  TV FI+K 
Sbjct: 177  MLKRRVNLLVEAGLSAEYLCSSDLLLKEPAVMVEKEGGAAFLPDDCQLDARHTVAFIRKA 236

Query: 362  NRSYGS--RYVEFFNDPVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKN 535
            N  + S  RY EFFNDP   +LRS  +GE+E V+T KN LY KKA+++AAG WSGSL+ +
Sbjct: 237  NEVFASEGRYAEFFNDPATLLLRSGNTGEIEAVQTSKNILYRKKAIIVAAGCWSGSLIHD 296

Query: 536  IVEKFHIVLDVPVKPRKGHLLVIENFNSIRLNHGLMEVGYMDHQVAA--PSDSGVVDYSH 709
            ++    +VLDVPVKPRKGHLLV+ENFN ++L HGLMEVGY +H+V A   + S   D   
Sbjct: 297  LLRNSDVVLDVPVKPRKGHLLVLENFNFLQLKHGLMEVGYANHEVTAQHTTSSASGDQGQ 356

Query: 710  TMSISMTATLDGAGNLVLGSSRQFVGFNTDLDESIVDQIWKRAGEFIPSLRDVGLEELS 886
             +SISMTAT+D  GNLVLG SRQF GF+T++DE I+D IW+RA  F PSL+++ L + +
Sbjct: 357  ALSISMTATMDTVGNLVLGHSRQFSGFDTNVDEYILDHIWERARVFFPSLKELPLNDFT 415


>ref|XP_004168063.1| PREDICTED: LOW QUALITY PROTEIN: D-amino acid dehydrogenase small
           subunit-like [Cucumis sativus]
          Length = 491

 Score =  347 bits (889), Expect = 3e-93
 Identities = 163/294 (55%), Positives = 224/294 (76%)
 Frame = +2

Query: 2   YIWMAGKTPGTELWELGMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELS 181
           Y+WMA K+PG+++WEL +RS++LWE LA+ + +QG +P +ELGWKKTGSL+IGR+ +EL 
Sbjct: 128 YLWMAHKSPGSDIWELALRSQRLWEGLAESLRDQGLNPSEELGWKKTGSLLIGRTPDELD 187

Query: 182 MLKDRVELLSEAGLRAEFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKE 361
           MLK +V   S AGL AE+LS  +L+  EP +  G+  GAAFL +DCQLDA  T  FIQK 
Sbjct: 188 MLKRKVNQFSGAGLEAEYLSSVDLLSMEPALLIGDSCGAAFLPNDCQLDAYSTAAFIQKA 247

Query: 362 NRSYGSRYVEFFNDPVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKNIV 541
           NR +  RY EFF+DPV  +LRS  +G++E V+T K +LY KKA+V+AAG WSG+L+++++
Sbjct: 248 NRHFKGRYAEFFHDPVTGLLRSGSNGKIEAVQTSKTTLYSKKAIVLAAGCWSGTLLRDLL 307

Query: 542 EKFHIVLDVPVKPRKGHLLVIENFNSIRLNHGLMEVGYMDHQVAAPSDSGVVDYSHTMSI 721
            +   VLDVP+ PRKGHLLVIENFNS+ +NHGLMEVGY++HQ    +     D+  T S+
Sbjct: 308 REGKTVLDVPIMPRKGHLLVIENFNSLHVNHGLMEVGYVNHQALTLAK----DFEQTSSV 363

Query: 722 SMTATLDGAGNLVLGSSRQFVGFNTDLDESIVDQIWKRAGEFIPSLRDVGLEEL 883
           SMTAT+D  GNL+LGSSR+F GFNT+++E IV +IW+RA EF P+L++V L ++
Sbjct: 364 SMTATMDVQGNLILGSSREFAGFNTEINEFIVARIWERASEFFPTLKEVSLSDI 417


>ref|XP_004148947.1| PREDICTED: D-amino acid dehydrogenase small subunit-like [Cucumis
           sativus]
          Length = 490

 Score =  347 bits (889), Expect = 3e-93
 Identities = 163/294 (55%), Positives = 224/294 (76%)
 Frame = +2

Query: 2   YIWMAGKTPGTELWELGMRSKQLWENLAKGIEEQGFSPLQELGWKKTGSLMIGRSLEELS 181
           Y+WMA K+PG+++WEL +RS++LWE LA+ + +QG +P +ELGWKKTGSL+IGR+ +EL 
Sbjct: 128 YLWMAHKSPGSDIWELALRSQRLWEGLAESLRDQGLNPSEELGWKKTGSLLIGRTPDELD 187

Query: 182 MLKDRVELLSEAGLRAEFLSRSELVKKEPLVDAGNEGGAAFLHDDCQLDALRTVEFIQKE 361
           MLK +V   S AGL AE+LS  +L+  EP +  G+  GAAFL +DCQLDA  T  FIQK 
Sbjct: 188 MLKRKVNQFSGAGLEAEYLSSVDLLSMEPALLIGDSCGAAFLPNDCQLDAYSTAAFIQKA 247

Query: 362 NRSYGSRYVEFFNDPVIDVLRSSGSGEVEGVRTEKNSLYCKKAVVIAAGSWSGSLMKNIV 541
           NR +  RY EFF+DPV  +LRS  +G++E V+T K +LY KKA+V+AAG WSG+L+++++
Sbjct: 248 NRHFKGRYAEFFHDPVTGLLRSGSNGKIEAVQTSKTTLYSKKAIVLAAGCWSGTLLRDLL 307

Query: 542 EKFHIVLDVPVKPRKGHLLVIENFNSIRLNHGLMEVGYMDHQVAAPSDSGVVDYSHTMSI 721
            +   VLDVP+ PRKGHLLVIENFNS+ +NHGLMEVGY++HQ    +     D+  T S+
Sbjct: 308 REGKTVLDVPIMPRKGHLLVIENFNSLHVNHGLMEVGYVNHQALTLAK----DFEQTSSV 363

Query: 722 SMTATLDGAGNLVLGSSRQFVGFNTDLDESIVDQIWKRAGEFIPSLRDVGLEEL 883
           SMTAT+D  GNL+LGSSR+F GFNT+++E IV +IW+RA EF P+L++V L ++
Sbjct: 364 SMTATMDVQGNLILGSSREFAGFNTEINEFIVARIWERASEFFPTLKEVSLSDI 417


Top