BLASTX nr result

ID: Coptis21_contig00021123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021123
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528746.1| PREDICTED: uncharacterized protein LOC100500...    75   1e-11
ref|XP_003627484.1| hypothetical protein MTR_8g023610 [Medicago ...    74   2e-11
ref|XP_002303339.1| predicted protein [Populus trichocarpa] gi|2...    72   8e-11
ref|NP_001077714.2| ROTUNDIFOLIA like 9 protein [Arabidopsis tha...    70   4e-10
ref|XP_002891768.1| hypothetical protein ARALYDRAFT_892420 [Arab...    70   4e-10

>ref|XP_003528746.1| PREDICTED: uncharacterized protein LOC100500339 [Glycine max]
          Length = 59

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -1

Query: 618 KKKGNKLSRRCASLVKEQRARIYILRRCATMLLCWYIQGDE 496
           K+KG  +S +CASLVKEQRAR+YILRRCATMLLCWYIQGD+
Sbjct: 19  KRKGYGISSKCASLVKEQRARLYILRRCATMLLCWYIQGDD 59


>ref|XP_003627484.1| hypothetical protein MTR_8g023610 [Medicago truncatula]
           gi|355521506|gb|AET01960.1| hypothetical protein
           MTR_8g023610 [Medicago truncatula]
          Length = 58

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = -1

Query: 633 QKHLIKKKGNKLSRRCASLVKEQRARIYILRRCATMLLCWYIQGDE 496
           +K   KKK N +S +CASLVKEQRAR+YI+RRCATMLLCWYIQG++
Sbjct: 13  EKVATKKKRNGISSKCASLVKEQRARLYIVRRCATMLLCWYIQGED 58


>ref|XP_002303339.1| predicted protein [Populus trichocarpa] gi|222840771|gb|EEE78318.1|
           predicted protein [Populus trichocarpa]
          Length = 63

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -1

Query: 618 KKKGNKLSRRCASLVKEQRARIYILRRCATMLLCWYIQGDE 496
           + KG+  + +CA+LVKEQRARIYILRRCATMLLCWYIQGD+
Sbjct: 23  RSKGHGFTNKCAALVKEQRARIYILRRCATMLLCWYIQGDD 63


>ref|NP_001077714.2| ROTUNDIFOLIA like 9 protein [Arabidopsis thaliana]
           gi|332194865|gb|AEE32986.1| ROTUNDIFOLIA like 9 protein
           [Arabidopsis thaliana]
          Length = 109

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -1

Query: 612 KGNKLSRRCASLVKEQRARIYILRRCATMLLCWYIQGDE 496
           KG+  + +CASLVKEQRAR+YILRRCATML CWYIQGD+
Sbjct: 10  KGHAFTSKCASLVKEQRARLYILRRCATMLCCWYIQGDD 48


>ref|XP_002891768.1| hypothetical protein ARALYDRAFT_892420 [Arabidopsis lyrata subsp.
           lyrata] gi|297337610|gb|EFH68027.1| hypothetical protein
           ARALYDRAFT_892420 [Arabidopsis lyrata subsp. lyrata]
          Length = 62

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -1

Query: 612 KGNKLSRRCASLVKEQRARIYILRRCATMLLCWYIQGDE 496
           KG+  + +CASLVKEQRAR+YILRRCATML CWYIQGD+
Sbjct: 10  KGHAFTSKCASLVKEQRARLYILRRCATMLCCWYIQGDD 48


Top