BLASTX nr result

ID: Coptis21_contig00021114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021114
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627895.1| Nudix hydrolase [Medicago truncatula] gi|355...   187   8e-46
ref|XP_003546710.1| PREDICTED: nudix hydrolase 16, mitochondrial...   186   2e-45
ref|XP_003557388.1| PREDICTED: nudix hydrolase 16, mitochondrial...   186   2e-45
ref|XP_003542815.1| PREDICTED: nudix hydrolase 16, mitochondrial...   186   3e-45
ref|XP_002882782.1| hypothetical protein ARALYDRAFT_478618 [Arab...   185   4e-45

>ref|XP_003627895.1| Nudix hydrolase [Medicago truncatula] gi|355521917|gb|AET02371.1|
           Nudix hydrolase [Medicago truncatula]
           gi|388494930|gb|AFK35531.1| unknown [Medicago
           truncatula]
          Length = 175

 Score =  187 bits (476), Expect = 8e-46
 Identities = 91/142 (64%), Positives = 104/142 (73%)
 Frame = +1

Query: 154 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 333
           MSDLVARTGR  QRYEDGYRLVAGC+PF+Y+   +     +++ ++VLMINS SGPGLLF
Sbjct: 1   MSDLVARTGRHQQRYEDGYRLVAGCVPFRYKSCDDE--SSSEKIVEVLMINSPSGPGLLF 58

Query: 334 PKGGWENDETXXXXXXXXXXXXXXXXXXXMDCLGRYRFKSKTHQDEFSPEGLCEAAMFPL 513
           PKGGWENDET                   M+CLG Y F+SKTHQDEFSPEGLC+AAMF L
Sbjct: 59  PKGGWENDETVEEAAVREAIEEAGVRGDLMECLGYYEFRSKTHQDEFSPEGLCKAAMFAL 118

Query: 514 FVKEELNSWPEQNTRQRRWLTV 579
           FVKEEL+ WPEQNTR R WL V
Sbjct: 119 FVKEELDLWPEQNTRNRSWLDV 140


>ref|XP_003546710.1| PREDICTED: nudix hydrolase 16, mitochondrial-like [Glycine max]
          Length = 175

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/143 (63%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
 Frame = +1

Query: 154 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNL-QVLMINSTSGPGLL 330
           MS+LVARTGR  QRYE+GYRLV+GC+PF+Y+ S + CG  + + + +VLMINS SGPGLL
Sbjct: 1   MSELVARTGRHQQRYENGYRLVSGCVPFRYKSSND-CGDSSSEKIVEVLMINSPSGPGLL 59

Query: 331 FPKGGWENDETXXXXXXXXXXXXXXXXXXXMDCLGRYRFKSKTHQDEFSPEGLCEAAMFP 510
           FPKGGWENDET                   MD LG Y F+SKTHQDEFSPEGLC+AAMF 
Sbjct: 60  FPKGGWENDETVEQAAVREAVEEAGVRGDIMDFLGHYEFRSKTHQDEFSPEGLCKAAMFA 119

Query: 511 LFVKEELNSWPEQNTRQRRWLTV 579
           LFVKEEL  WPEQ+TR RRWL V
Sbjct: 120 LFVKEELELWPEQSTRNRRWLAV 142


>ref|XP_003557388.1| PREDICTED: nudix hydrolase 16, mitochondrial-like [Brachypodium
           distachyon]
          Length = 182

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/144 (64%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +1

Query: 154 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSG-ENCGGKTKQNLQVLMINSTSGPGLL 330
           M DLVARTGRL QRYEDG RLVAGCIPF+YRD+  E  GG+ K+ ++VLMINS SGPGLL
Sbjct: 1   MCDLVARTGRLQQRYEDGRRLVAGCIPFRYRDNNDETSGGEQKRLVEVLMINSQSGPGLL 60

Query: 331 FPKGGWENDETXXXXXXXXXXXXXXXXXXXMDCLGRYRFKSKTHQDEFSPEGLCEAAMFP 510
           FPKGGWENDET                   +  LG Y FKSK+HQDEF PEG+C AA+F 
Sbjct: 61  FPKGGWENDETVEEAAAREAIEEAGVRGDLVQFLGFYNFKSKSHQDEFCPEGMCRAAIFA 120

Query: 511 LFVKEELNSWPEQNTRQRRWLTVP 582
           L VKEEL SWPEQ+ RQR WLTVP
Sbjct: 121 LHVKEELASWPEQSIRQRSWLTVP 144


>ref|XP_003542815.1| PREDICTED: nudix hydrolase 16, mitochondrial-like [Glycine max]
          Length = 175

 Score =  186 bits (471), Expect = 3e-45
 Identities = 91/143 (63%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
 Frame = +1

Query: 154 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNL-QVLMINSTSGPGLL 330
           MS+LVARTGR  QRYE+GYRLV+GC+PF+Y+ S + CG  + + + +VLMINS SGPGLL
Sbjct: 1   MSELVARTGRHQQRYENGYRLVSGCVPFRYKSSND-CGDSSSEKIVEVLMINSPSGPGLL 59

Query: 331 FPKGGWENDETXXXXXXXXXXXXXXXXXXXMDCLGRYRFKSKTHQDEFSPEGLCEAAMFP 510
           FPKGGWENDET                   MD LG Y F+SKTHQDEFSPEGLC+AAMF 
Sbjct: 60  FPKGGWENDETVEQAAVREAVEEAGVRGDIMDFLGYYEFRSKTHQDEFSPEGLCKAAMFA 119

Query: 511 LFVKEELNSWPEQNTRQRRWLTV 579
           LFVKEEL  WPEQ+TR RRWL V
Sbjct: 120 LFVKEELELWPEQSTRNRRWLAV 142


>ref|XP_002882782.1| hypothetical protein ARALYDRAFT_478618 [Arabidopsis lyrata subsp.
           lyrata] gi|297328622|gb|EFH59041.1| hypothetical protein
           ARALYDRAFT_478618 [Arabidopsis lyrata subsp. lyrata]
          Length = 180

 Score =  185 bits (470), Expect = 4e-45
 Identities = 89/142 (62%), Positives = 105/142 (73%)
 Frame = +1

Query: 154 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 333
           M DLVARTGRL QRYEDG RLVAGCIPF+Y +S ++   ++ + +QVLMI+S+SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYINSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 334 PKGGWENDETXXXXXXXXXXXXXXXXXXXMDCLGRYRFKSKTHQDEFSPEGLCEAAMFPL 513
           PKGGWENDET                   MD LG Y FKSKTHQDEFSPEGLC+AAM+ L
Sbjct: 61  PKGGWENDETVREAAVREAVEEAGVRGILMDFLGNYEFKSKTHQDEFSPEGLCKAAMYAL 120

Query: 514 FVKEELNSWPEQNTRQRRWLTV 579
           +VKEEL +WPE  TR R+WLT+
Sbjct: 121 YVKEELETWPEHETRTRKWLTI 142


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