BLASTX nr result

ID: Coptis21_contig00021110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021110
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228...    83   2e-14
ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220...    83   2e-14
gb|AFW83667.1| putative regulator of chromosome condensation (RC...    82   6e-14
ref|NP_001141600.1| uncharacterized protein LOC100273718 [Zea ma...    82   6e-14

>ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|222851492|gb|EEE89039.1|
            predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
 Frame = -3

Query: 314  SANIQVQKMNDTANTAVAA-----DLSLSAESNGLSGSHSEEAGSHQSVENSSSTPRVPT 150
            S+N+  ++M    +T  A      D S+  ES+  S SH  EA   +S EN S TP    
Sbjct: 944  SSNLLEKRMEGQTDTVRATAMSRTDGSVPEESSRSSVSHLTEAVPRESSENESRTPTASI 1003

Query: 149  ASNEGQRPLIEQFEPGVYITLVQLANGTKLFKRVRFSKRRFNEQQA 12
               E Q+ +IEQFEPGVY+T++   NG K+FKRV+FSKRRF EQQA
Sbjct: 1004 KRTESQKEIIEQFEPGVYVTVILRPNGVKIFKRVKFSKRRFQEQQA 1049


>ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
            sativus]
          Length = 958

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/62 (64%), Positives = 50/62 (80%)
 Frame = -3

Query: 191  QSVENSSSTPRVPTASNEGQRPLIEQFEPGVYITLVQLANGTKLFKRVRFSKRRFNEQQA 12
            +S + S +  R P +S EG++ +IEQFEPGVY TLV L+NGTK+FKRVRFSKRRF+EQQA
Sbjct: 829  ESKKTSENGSRSPLSSTEGEKQVIEQFEPGVYATLVVLSNGTKIFKRVRFSKRRFDEQQA 888

Query: 11   GD 6
             D
Sbjct: 889  ED 890


>ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/62 (64%), Positives = 50/62 (80%)
 Frame = -3

Query: 191  QSVENSSSTPRVPTASNEGQRPLIEQFEPGVYITLVQLANGTKLFKRVRFSKRRFNEQQA 12
            +S + S +  R P +S EG++ +IEQFEPGVY TLV L+NGTK+FKRVRFSKRRF+EQQA
Sbjct: 967  ESKKTSENGSRSPLSSTEGEKQVIEQFEPGVYATLVVLSNGTKIFKRVRFSKRRFDEQQA 1026

Query: 11   GD 6
             D
Sbjct: 1027 ED 1028


>gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 1054

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
 Frame = -3

Query: 254  LSLSAESNGLSGSH---SEEAGSHQSVENSSSTPR--VPTASNEGQRPLIEQFEPGVYIT 90
            L++S + +  SGS    + E+ SH+ +ENSS       P     G+  LIEQFEPGVY+T
Sbjct: 934  LTMSQDGSSASGSAMSITSESPSHRFMENSSKAHGDFAPKQGTHGEVQLIEQFEPGVYVT 993

Query: 89   LVQLANGTKLFKRVRFSKRRFNEQQA 12
            L+QL +GTK+FKRVRFSKRRF E QA
Sbjct: 994  LIQLKDGTKVFKRVRFSKRRFAENQA 1019


>ref|NP_001141600.1| uncharacterized protein LOC100273718 [Zea mays]
           gi|224034887|gb|ACN36519.1| unknown [Zea mays]
          Length = 344

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
 Frame = -3

Query: 254 LSLSAESNGLSGSH---SEEAGSHQSVENSSSTPR--VPTASNEGQRPLIEQFEPGVYIT 90
           L++S + +  SGS    + E+ SH+ +ENSS       P     G+  LIEQFEPGVY+T
Sbjct: 224 LTMSQDGSSASGSAMSITSESPSHRFMENSSKAHGDFAPKQGTHGEVQLIEQFEPGVYVT 283

Query: 89  LVQLANGTKLFKRVRFSKRRFNEQQA 12
           L+QL +GTK+FKRVRFSKRRF E QA
Sbjct: 284 LIQLKDGTKVFKRVRFSKRRFAENQA 309


Top