BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021104
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15850.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   123   1e-26
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   123   1e-26
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ...   122   2e-26
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops...   119   3e-25

>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/77 (74%), Positives = 69/77 (89%)
 Frame = +3

Query: 3   ESNCGNLHKIGWAKSSRTDEGVHSLSTTIALKMEIPENAWKEDPCGIVLASCINSNLPSD 182
           +SN GNLHKIGW +SSRTD+GVHSL+T I+LKMEIP NAWKEDP GI LA+ +N +LP++
Sbjct: 107 DSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNN 166

Query: 183 VKVFSVLPSQRSFDARR 233
           +KVFS+LPSQRSFDARR
Sbjct: 167 IKVFSILPSQRSFDARR 183


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/77 (74%), Positives = 69/77 (89%)
 Frame = +3

Query: 3   ESNCGNLHKIGWAKSSRTDEGVHSLSTTIALKMEIPENAWKEDPCGIVLASCINSNLPSD 182
           +SN GNLHKIGW +SSRTD+GVHSL+T I+LKMEIP NAWKEDP GI LA+ +N +LP++
Sbjct: 107 DSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNN 166

Query: 183 VKVFSVLPSQRSFDARR 233
           +KVFS+LPSQRSFDARR
Sbjct: 167 IKVFSILPSQRSFDARR 183


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/77 (74%), Positives = 69/77 (89%)
 Frame = +3

Query: 3   ESNCGNLHKIGWAKSSRTDEGVHSLSTTIALKMEIPENAWKEDPCGIVLASCINSNLPSD 182
           +SN GNLHKIGW +SSRTD+GVHSL+T I+LKMEIP NAWKEDP GI LA+ +N +LP++
Sbjct: 107 DSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNN 166

Query: 183 VKVFSVLPSQRSFDARR 233
           +KVFS+LPSQRSFDARR
Sbjct: 167 IKVFSILPSQRSFDARR 183


>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 377

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/77 (70%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   ESNCGNLHKIGWAKSSRTDEGVHSLSTTIALKMEIPENAWKEDPCGIVLASCINSNLPSD 182
           +SN GNLHKI WA+SSRTD+GVHSL+T I++KMEIPENAWKEDP GI LA C+N  LP +
Sbjct: 98  DSNYGNLHKIAWARSSRTDKGVHSLATMISMKMEIPENAWKEDPNGIALAECVNYYLPDN 157

Query: 183 VKVFSVLPSQRSFDARR 233
           +++FS+LPSQ+SFD RR
Sbjct: 158 IRIFSILPSQKSFDPRR 174


>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
           gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
           tRNA pseudouridine synthase; AltName: Full=tRNA
           pseudouridylate synthase; AltName: Full=tRNA-uridine
           isomerase gi|2347206|gb|AAC16945.1| putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
           synthase [Arabidopsis thaliana]
          Length = 510

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/77 (70%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   ESNCGNLHKIGWAKSSRTDEGVHSLSTTIALKMEIPENAWKEDPCGIVLASCINSNLPSD 182
           +SN G+LHKIGWA+SSRTD+GVHSL+T+I+LKMEIPE AWK+DP G VLA CI+ +LP +
Sbjct: 107 DSNYGDLHKIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDPQGTVLAKCISKHLPEN 166

Query: 183 VKVFSVLPSQRSFDARR 233
           ++VFSVLPS R FD RR
Sbjct: 167 IRVFSVLPSNRRFDPRR 183