BLASTX nr result

ID: Coptis21_contig00021091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021091
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280593.1| PREDICTED: mitochondrial protein import prot...    68   9e-10
ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [S...    66   3e-09
tpg|DAA58878.1| TPA: etched1 [Zea mays]                                65   4e-09
ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038....    65   6e-09
ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG...    65   6e-09

>ref|XP_002280593.1| PREDICTED: mitochondrial protein import protein ZIM17 [Vitis
           vinifera] gi|297737905|emb|CBI27106.3| unnamed protein
           product [Vitis vinifera]
          Length = 173

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 8/59 (13%)
 Frame = -3

Query: 153 LASESHPNKPLE----ETNIDIKLPRRSLLVKFT----GERTERLINRLAYERGTVFVQ 1
           ++S SH N   +    E +IDIKLPRRSL+V+FT    GERTERLINRLA+ERGTVFVQ
Sbjct: 80  VSSSSHSNSVSDDSCSEASIDIKLPRRSLIVQFTCDACGERTERLINRLAFERGTVFVQ 138


>ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor]
           gi|241930096|gb|EES03241.1| hypothetical protein
           SORBIDRAFT_03g027210 [Sorghum bicolor]
          Length = 163

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
 Frame = -3

Query: 174 SDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERGTVF 7
           S S+  E  S++ P+ P E T IDIKLPRRSLLV+FT    GERT+RLINR+AYERGTVF
Sbjct: 64  SASSSGEANSDAVPS-PTEAT-IDIKLPRRSLLVQFTCNACGERTKRLINRVAYERGTVF 121

Query: 6   VQ 1
           +Q
Sbjct: 122 LQ 123


>tpg|DAA58878.1| TPA: etched1 [Zea mays]
          Length = 166

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
 Frame = -3

Query: 183 IATSDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERG 16
           +  S S+  E  S++ P+    E  IDIKLPRRSLLV+FT    GERT+RLINR+AYERG
Sbjct: 64  LIVSASSSGEANSDAAPSPT--EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYERG 121

Query: 15  TVFVQ 1
           TVF+Q
Sbjct: 122 TVFLQ 126


>ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.1| ETCHED1 protein [Zea
           mays] gi|48596293|emb|CAD45039.1| ETCHED1 protein [Zea
           mays]
          Length = 163

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
 Frame = -3

Query: 183 IATSDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERG 16
           +  S S+  E  S++ P+    E  IDIKLPRRSLLV+FT    GERT+RLINR+AYERG
Sbjct: 61  LIVSASSSGEANSDAVPSPT--EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYERG 118

Query: 15  TVFVQ 1
           TVF+Q
Sbjct: 119 TVFLQ 123


>ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG39419.1| zinc ribbon 1
           [Zea mays]
          Length = 161

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
 Frame = -3

Query: 183 IATSDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERG 16
           +  S S+  E  S++ P+    E  IDIKLPRRSLLV+FT    GERT+RLINR+AYERG
Sbjct: 59  LIVSASSSGEANSDAVPSPA--EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYERG 116

Query: 15  TVFVQ 1
           TVF+Q
Sbjct: 117 TVFLQ 121


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