BLASTX nr result
ID: Coptis21_contig00021091
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021091 (236 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280593.1| PREDICTED: mitochondrial protein import prot... 68 9e-10 ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [S... 66 3e-09 tpg|DAA58878.1| TPA: etched1 [Zea mays] 65 4e-09 ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.... 65 6e-09 ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG... 65 6e-09 >ref|XP_002280593.1| PREDICTED: mitochondrial protein import protein ZIM17 [Vitis vinifera] gi|297737905|emb|CBI27106.3| unnamed protein product [Vitis vinifera] Length = 173 Score = 67.8 bits (164), Expect = 9e-10 Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 8/59 (13%) Frame = -3 Query: 153 LASESHPNKPLE----ETNIDIKLPRRSLLVKFT----GERTERLINRLAYERGTVFVQ 1 ++S SH N + E +IDIKLPRRSL+V+FT GERTERLINRLA+ERGTVFVQ Sbjct: 80 VSSSSHSNSVSDDSCSEASIDIKLPRRSLIVQFTCDACGERTERLINRLAFERGTVFVQ 138 >ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor] gi|241930096|gb|EES03241.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor] Length = 163 Score = 65.9 bits (159), Expect = 3e-09 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 4/62 (6%) Frame = -3 Query: 174 SDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERGTVF 7 S S+ E S++ P+ P E T IDIKLPRRSLLV+FT GERT+RLINR+AYERGTVF Sbjct: 64 SASSSGEANSDAVPS-PTEAT-IDIKLPRRSLLVQFTCNACGERTKRLINRVAYERGTVF 121 Query: 6 VQ 1 +Q Sbjct: 122 LQ 123 >tpg|DAA58878.1| TPA: etched1 [Zea mays] Length = 166 Score = 65.5 bits (158), Expect = 4e-09 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%) Frame = -3 Query: 183 IATSDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERG 16 + S S+ E S++ P+ E IDIKLPRRSLLV+FT GERT+RLINR+AYERG Sbjct: 64 LIVSASSSGEANSDAAPSPT--EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYERG 121 Query: 15 TVFVQ 1 TVF+Q Sbjct: 122 TVFLQ 126 >ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.1| ETCHED1 protein [Zea mays] gi|48596293|emb|CAD45039.1| ETCHED1 protein [Zea mays] Length = 163 Score = 65.1 bits (157), Expect = 6e-09 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%) Frame = -3 Query: 183 IATSDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERG 16 + S S+ E S++ P+ E IDIKLPRRSLLV+FT GERT+RLINR+AYERG Sbjct: 61 LIVSASSSGEANSDAVPSPT--EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYERG 118 Query: 15 TVFVQ 1 TVF+Q Sbjct: 119 TVFLQ 123 >ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG39419.1| zinc ribbon 1 [Zea mays] Length = 161 Score = 65.1 bits (157), Expect = 6e-09 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%) Frame = -3 Query: 183 IATSDSNEDELASESHPNKPLEETNIDIKLPRRSLLVKFT----GERTERLINRLAYERG 16 + S S+ E S++ P+ E IDIKLPRRSLLV+FT GERT+RLINR+AYERG Sbjct: 59 LIVSASSSGEANSDAVPSPA--EAAIDIKLPRRSLLVQFTCNACGERTKRLINRVAYERG 116 Query: 15 TVFVQ 1 TVF+Q Sbjct: 117 TVFLQ 121