BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021081
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_002520592.1| pentatricopeptide repeat-containing protein,...   125   3e-27
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ...   125   5e-27

>ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|222867186|gb|EEF04317.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/92 (67%), Positives = 76/92 (82%)
 Frame = -3

Query: 276 MSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLF 97
           M+ +NTV++NS+IS  AKN +IN AR LFD+MP RNLVSWNTM++GYLHN +  EA KLF
Sbjct: 1   MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60

Query: 96  GVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
            +M RRD F+WTLMITCYTRNGE+ KARE F+
Sbjct: 61  VIMPRRDLFSWTLMITCYTRNGEVEKARELFD 92



 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/94 (45%), Positives = 61/94 (64%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           K F+     N VSW +++S  A+N  I  +R LFD+MP+RN+VSWN MI+ Y+   +I E
Sbjct: 185 KFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDE 244

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARE 10
           A +LF  M  RD+ +WT MI  Y R G++ +ARE
Sbjct: 245 ASRLFEEMPERDSVSWTTMINGYVRIGKLDEARE 278



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 33/89 (37%), Positives = 55/89 (61%)
 Frame = -3

Query: 267 RNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLFGVM 88
           +    WN++IS   K  ++N A+ LFDEMP +NL+SWN+M+AGY  N ++   ++ F  M
Sbjct: 100 KGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEM 159

Query: 87  QRRDNFTWTLMITCYTRNGEMGKARECFE 1
             RD  +W LM+  + + G++  A + F+
Sbjct: 160 DERDVVSWNLMVDGFIQVGDLDSAWKFFQ 188



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/97 (39%), Positives = 60/97 (61%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++   M  RN  +  ++IS   + N+++ AR  FDE+ T ++V WN MIAGY H+ +I+E
Sbjct: 278 ELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINE 337

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A+ L   M  +D  TW  MI+CY + G+M +A + FE
Sbjct: 338 ALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFE 374



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/97 (40%), Positives = 61/97 (62%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F+ M +RN VSWN++ISA  +  +I+ A  LF+EMP R+ VSW TMI GY+   ++ E
Sbjct: 216 RLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDE 275

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A +L   M  R+    T MI+ Y +  ++ +AR  F+
Sbjct: 276 ARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFD 312



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/97 (29%), Positives = 57/97 (58%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F+ M  +N +SWNS+++   +N ++      F+EM  R++VSWN M+ G++    +  
Sbjct: 123 RLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDS 182

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A K F   Q+ +  +W  M++ + RNG + ++R  F+
Sbjct: 183 AWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFD 219



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 IFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEA 109
           +F+ M  RN VSWN+++S    N + + A  LF  MP R+L SW  MI  Y  N ++ +A
Sbjct: 28  LFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLFSWTLMITCYTRNGEVEKA 87

Query: 108 VKLFGVM---QRRDNFTWTLMITCYTRNGEMGKARECFE 1
            +LF  +    R+    W  MI+ Y + G + +A+  F+
Sbjct: 88  RELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFD 126



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMP---TRNLVSWNTMIAGYLHNDQ 121
           K+F  M  R+  SW  +I+   +N ++  AR LFD +P    + +  WN MI+GY+   +
Sbjct: 58  KLFVIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGR 117

Query: 120 ISEAVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           ++EA +LF  M  ++  +W  M+  YT+N +M    E F
Sbjct: 118 VNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFF 156



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/96 (34%), Positives = 54/96 (56%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           + F+ + T + V WN++I+  A + +IN A  L   M  +++V+WNTMI+ Y    Q+  
Sbjct: 309 RFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDR 368

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           AVK+F  M  RD  +W  +I  +  NG+   A + F
Sbjct: 369 AVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSF 404



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/97 (32%), Positives = 51/97 (52%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           + F  M  R+ VSWN ++    +   ++ A   F E    N+VSW TM++G+  N  I E
Sbjct: 154 EFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILE 213

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           + +LF  M  R+  +W  MI+ Y +  E+ +A   FE
Sbjct: 214 SRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFE 250



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/65 (41%), Positives = 46/65 (70%)
 Frame = -3

Query: 282 ENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVK 103
           + M  ++ V+WN++IS  A+  Q++ A  +F+EM  R+LVSWN++IAG++ N Q  +A+K
Sbjct: 343 KRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALK 402

Query: 102 LFGVM 88
            F +M
Sbjct: 403 SFALM 407


>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/96 (62%), Positives = 77/96 (80%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           K+F++M+ +NTV+ NS+ISA AKN +I+ AR LFD MP RN+VSWN+MIA YLHND++ E
Sbjct: 36  KVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEE 95

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A +LF  M  RD ++WTLMITCYTRNGE+ KAR  F
Sbjct: 96  ARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLF 131



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/129 (37%), Positives = 65/129 (50%), Gaps = 32/129 (24%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSW--------------- 157
           ++F+ M  RN VSWNS+I+A   N+++  AR LFD+MPTR+L SW               
Sbjct: 67  QLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAK 126

Query: 156 -----------------NTMIAGYLHNDQISEAVKLFGVMQRRDNFTWTLMITCYTRNGE 28
                            N M+AGY  N Q  EA +LF  M  +D  +W  M+T YTRNGE
Sbjct: 127 ARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGE 186

Query: 27  MGKARECFE 1
           M    + FE
Sbjct: 187 MRLGLQFFE 195



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/94 (41%), Positives = 61/94 (64%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           + FE +   NTVSW +++   A+  +I  AR LFD+MP RN+V+WN MIA Y+ N  + E
Sbjct: 223 EFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDE 282

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARE 10
           A+ LF  M  +++ +WT +I  Y R G++ +AR+
Sbjct: 283 AISLFMEMPEKNSISWTTVINGYVRMGKLDEARQ 316



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/96 (38%), Positives = 59/96 (61%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F+ M  RN V+WN++I+A  +N  ++ A +LF EMP +N +SW T+I GY+   ++ E
Sbjct: 254 RLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDE 313

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A +L   M  R+    T MI+ Y +N  M  AR+ F
Sbjct: 314 ARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIF 349



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/88 (38%), Positives = 53/88 (60%)
 Frame = -3

Query: 264 NTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLFGVMQ 85
           N V  N++++  AKN Q + AR LFD MP ++LVSWN+M+ GY  N ++   ++ F  M 
Sbjct: 139 NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA 198

Query: 84  RRDNFTWTLMITCYTRNGEMGKARECFE 1
            RD  +W LM+  +   G++  + E FE
Sbjct: 199 ERDVVSWNLMVDGFVEVGDLNSSWEFFE 226



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/97 (34%), Positives = 58/97 (59%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++   M  RN  +  ++IS   +N +++ AR +F+++  R++V WNTMIAGY    ++ E
Sbjct: 316 QLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDE 375

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A+ LF  M ++D  +W  M+  Y + G+M  A + FE
Sbjct: 376 ALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFE 412



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/96 (31%), Positives = 57/96 (59%)
 Frame = -3

Query: 288 IFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEA 109
           +F  M  +N++SW ++I+   +  +++ AR L ++MP RN+ +   MI+GY+ N ++ +A
Sbjct: 286 LFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDA 345

Query: 108 VKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
            ++F  +  RD   W  MI  Y++ G M +A   F+
Sbjct: 346 RQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFK 381



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/96 (33%), Positives = 59/96 (61%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           +IF  +S R+ V WN++I+  ++  +++ A  LF +M  +++VSWNTM+A Y    Q+  
Sbjct: 347 QIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDA 406

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A+K+F  M+ ++  +W  +I+  T+NG    A + F
Sbjct: 407 AIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSF 442



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/96 (33%), Positives = 52/96 (54%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           + FE M+ R+ VSWN ++    +   +N +   F+++P  N VSW TM+ G+    +I+E
Sbjct: 192 QFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAE 251

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A +LF  M  R+   W  MI  Y +N  + +A   F
Sbjct: 252 ARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLF 287



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 26/97 (26%), Positives = 56/97 (57%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F+ M  ++ VSWNS+++   +N ++      F+EM  R++VSWN M+ G++    ++ 
Sbjct: 161 RLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNS 220

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           + + F  +   +  +W  M+  + R G++ +AR  F+
Sbjct: 221 SWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFD 257



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/83 (34%), Positives = 48/83 (57%)
 Frame = -3

Query: 249 NSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLFGVMQRRDNF 70
           N  I+   K+ QI+ A  +F  M  +N V+ N+MI+ +  N +IS+A +LF  M +R+  
Sbjct: 19  NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIV 78

Query: 69  TWTLMITCYTRNGEMGKARECFE 1
           +W  MI  Y  N  + +AR+ F+
Sbjct: 79  SWNSMIAAYLHNDRVEEARQLFD 101



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/67 (35%), Positives = 46/67 (68%)
 Frame = -3

Query: 288 IFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEA 109
           +F+ M  ++ VSWN+++++ A+  Q++ A  +F+EM  +N+VSWN++I+G   N    +A
Sbjct: 379 LFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDA 438

Query: 108 VKLFGVM 88
           +K F +M
Sbjct: 439 LKSFMLM 445


>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/97 (62%), Positives = 75/97 (77%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           +IF NM+ +N V++NS+IS  AKN +I  AR LFD+M  RNLVSWNTMIAGYLHN+ + E
Sbjct: 38  RIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEE 97

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A +LF VM  RDNF+W LMITCYTR G++ KARE  E
Sbjct: 98  ASELFDVMPERDNFSWALMITCYTRKGKLEKARELLE 134



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/96 (42%), Positives = 64/96 (66%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++FE +   N VSW +++   AK  ++  AR LFD MP++N+VSWN MIA Y+ + Q+ E
Sbjct: 225 QLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDE 284

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           AVKLF  M  +D+ +WT +I  Y R G++ +AR+ +
Sbjct: 285 AVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVY 320



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/88 (37%), Positives = 58/88 (65%)
 Frame = -3

Query: 264 NTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLFGVMQ 85
           +T  WN++I+  AK  Q N A+ +F++MP ++LVS+N+M+AGY  N ++  A++ F  M 
Sbjct: 141 DTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMT 200

Query: 84  RRDNFTWTLMITCYTRNGEMGKARECFE 1
            R+  +W LM+  Y ++G++  A + FE
Sbjct: 201 ERNVVSWNLMVAGYVKSGDLSSAWQLFE 228



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/97 (35%), Positives = 60/97 (61%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           K+FE M  ++ VS+NS+++   +N +++ A   F+ M  RN+VSWN M+AGY+ +  +S 
Sbjct: 163 KVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSS 222

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A +LF  +   +  +W  M+    + G+M +ARE F+
Sbjct: 223 AWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFD 259



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/86 (32%), Positives = 53/86 (61%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F  +   + V WNS+I+  +++ +++ A  LF +MP +N VSWNTMI+GY    Q+  
Sbjct: 349 QMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDR 408

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRN 34
           A ++F  M+ ++  +W  +I  + +N
Sbjct: 409 ATEIFQAMREKNIVSWNSLIAGFLQN 434



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/96 (31%), Positives = 60/96 (62%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F+ M ++N VSWN++I+   ++ Q++ A  LF +MP ++ VSW T+I GY+   ++ E
Sbjct: 256 ELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDE 315

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A +++  M  +D    T +++   +NG + +A + F
Sbjct: 316 ARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMF 351



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/97 (28%), Positives = 58/97 (59%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           +++  M  ++  +  +++S   +N +I+ A  +F  +   ++V WN+MIAGY  + ++ E
Sbjct: 318 QVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDE 377

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A+ LF  M  +++ +W  MI+ Y + G+M +A E F+
Sbjct: 378 ALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQ 414



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/96 (29%), Positives = 58/96 (60%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           K+F+ M  +++VSW +II+   +  +++ AR ++++MP +++ +   +++G + N +I E
Sbjct: 287 KLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDE 346

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A ++F  +   D   W  MI  Y+R+G M +A   F
Sbjct: 347 ADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLF 382



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/67 (40%), Positives = 45/67 (67%)
 Frame = -3

Query: 288 IFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEA 109
           +F  M  +N+VSWN++IS  A+  Q++ A  +F  M  +N+VSWN++IAG+L N+   +A
Sbjct: 381 LFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDA 440

Query: 108 VKLFGVM 88
           +K   +M
Sbjct: 441 LKSLVMM 447


>ref|XP_002520592.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540252|gb|EEF41825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 525

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/89 (66%), Positives = 74/89 (83%)
 Frame = -3

Query: 276 MSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLF 97
           MS RNTV++NS+ISA AKN ++  AR LFD+MP RNLVSWNTMIAGYLHN+++ EA +LF
Sbjct: 1   MSQRNTVTYNSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELF 60

Query: 96  GVMQRRDNFTWTLMITCYTRNGEMGKARE 10
             M RRD F+WTLMITCYT+NG + KA++
Sbjct: 61  VKMPRRDLFSWTLMITCYTQNGMLEKAKQ 89



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/94 (42%), Positives = 63/94 (67%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           + F+ +   N VSW +++   A+  ++  AR LFD+MP++N+VSWN MI+ Y+ + QI E
Sbjct: 185 EFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMPSKNVVSWNAMISAYVQSRQIDE 244

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARE 10
           A KLF  M +RD+ +WT MI  Y R G++ +AR+
Sbjct: 245 AEKLFEEMPKRDSVSWTTMINGYVRAGKLDEARK 278



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/89 (39%), Positives = 58/89 (65%)
 Frame = -3

Query: 267 RNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLFGVM 88
           ++   WN++IS  ++  + + A+ LF+EMP +N+VSWN+M+AGY  N Q+S A++LF  M
Sbjct: 100 KDAACWNAMISGYSREGRYDDAKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEM 159

Query: 87  QRRDNFTWTLMITCYTRNGEMGKARECFE 1
             RD  +W LM+  +   G++  A E F+
Sbjct: 160 LERDVVSWNLMVDGFVELGDLDSAWEFFK 188



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/96 (38%), Positives = 61/96 (63%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F+ M ++N VSWN++ISA  ++ QI+ A  LF+EMP R+ VSW TMI GY+   ++ E
Sbjct: 216 RLFDQMPSKNVVSWNAMISAYVQSRQIDEAEKLFEEMPKRDSVSWTTMINGYVRAGKLDE 275

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A K    +  ++    T MI+ Y +  ++ +AR+ F
Sbjct: 276 ARKTLSKLPYKNIAAQTAMISGYIKYNKIDEARQIF 311



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = -3

Query: 288 IFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEA 109
           +F+ M  RN VSWN++I+    NN+++ A  LF +MP R+L SW  MI  Y  N  + +A
Sbjct: 28  LFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVKMPRRDLFSWTLMITCYTQNGMLEKA 87

Query: 108 VKLFGVM---QRRDNFTWTLMITCYTRNGEMGKARECF 4
            +L   +    ++D   W  MI+ Y+R G    A+  F
Sbjct: 88  KQLLNSLPCNYKKDAACWNAMISGYSREGRYDDAKRLF 125



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/97 (32%), Positives = 58/97 (59%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           K    +  +N  +  ++IS   K N+I+ AR +F+E+ T ++V +NTM+AGY    ++ E
Sbjct: 278 KTLSKLPYKNIAAQTAMISGYIKYNKIDEARQIFNEIGTPDMVCFNTMLAGYTQCGRVDE 337

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A+ LF  M ++D  +W  M+  Y + G+M +A + F+
Sbjct: 338 AIHLFEQMVKKDIVSWNTMVAAYAQVGQMERALKVFK 374



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/97 (31%), Positives = 56/97 (57%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F  M  +N VSWNS+++   +N Q++ A  LF EM  R++VSWN M+ G++    +  
Sbjct: 123 RLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEMLERDVVSWNLMVDGFVELGDLDS 182

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A + F  +   +  +W  M+  + R G++ +AR  F+
Sbjct: 183 AWEFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFD 219



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/97 (29%), Positives = 55/97 (56%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F  M  R+ VSWN ++    +   ++ A   F ++P  N+VSW TM+ G+    ++ E
Sbjct: 154 QLFHEMLERDVVSWNLMVDGFVELGDLDSAWEFFKKVPEPNIVSWVTMLYGFARKGKLLE 213

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A +LF  M  ++  +W  MI+ Y ++ ++ +A + FE
Sbjct: 214 ARRLFDQMPSKNVVSWNAMISAYVQSRQIDEAEKLFE 250



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/96 (30%), Positives = 56/96 (58%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           +IF  + T + V +N++++   +  +++ A  LF++M  +++VSWNTM+A Y    Q+  
Sbjct: 309 QIFNEIGTPDMVCFNTMLAGYTQCGRVDEAIHLFEQMVKKDIVSWNTMVAAYAQVGQMER 368

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A+K+F  M  R+  +W  +I+ +  +G    A  CF
Sbjct: 369 ALKVFKEMGERNLVSWNSLISGFMLHGMYLDALWCF 404



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/68 (39%), Positives = 46/68 (67%)
 Frame = -3

Query: 288 IFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEA 109
           +FE M  ++ VSWN++++A A+  Q+  A  +F EM  RNLVSWN++I+G++ +    +A
Sbjct: 341 LFEQMVKKDIVSWNTMVAAYAQVGQMERALKVFKEMGERNLVSWNSLISGFMLHGMYLDA 400

Query: 108 VKLFGVMQ 85
           +  F +MQ
Sbjct: 401 LWCFVLMQ 408


>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513593|gb|AES95216.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/97 (57%), Positives = 74/97 (76%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F N+  +N  ++NS+++  AKN +++ AR LFD+M  RNLVSWNTMIAGYLHN+ + E
Sbjct: 38  RVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEE 97

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A KLF +M  RDNF+W LMITCYTR G + KARE FE
Sbjct: 98  AHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFE 134



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/96 (44%), Positives = 62/96 (64%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++FE +   N VSW +++   A++ +I  AR LFD MP +N+VSWN MIA Y+ + QI E
Sbjct: 225 ELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDE 284

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           AVKLF     +D  +WT MI  Y R G++ +ARE +
Sbjct: 285 AVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVY 320



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/88 (37%), Positives = 56/88 (63%)
 Frame = -3

Query: 264 NTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEAVKLFGVMQ 85
           +T  WN++I+  AK  + + A  +F++MP ++LVS+N+M+AGY  N ++  A+K F  M 
Sbjct: 141 DTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMA 200

Query: 84  RRDNFTWTLMITCYTRNGEMGKARECFE 1
            R+  +W LM+  +  N ++G A E FE
Sbjct: 201 ERNVVSWNLMVAGFVNNCDLGSAWELFE 228



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 30/87 (34%), Positives = 55/87 (63%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           ++F  ++ R+ + WNS+I+   ++ +++ A  LF +MP +N VSWNTMI+GY    ++  
Sbjct: 349 QVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDR 408

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNG 31
           A ++F  M  R+  +W  +IT + +NG
Sbjct: 409 ATEIFEAMGVRNVISWNSLITGFLQNG 435



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/97 (32%), Positives = 61/97 (62%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           K+FE M  ++ VS+NS+++   +N ++  A   F+ M  RN+VSWN M+AG+++N  +  
Sbjct: 163 KVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGS 222

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A +LF  +   +  +W  M+  + R+G++ +AR+ F+
Sbjct: 223 AWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFD 259



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/96 (35%), Positives = 59/96 (61%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           K+F+ M  +N VSWN++I+A  ++ QI+ A  LF E P ++ VSW TMI GY+   ++ E
Sbjct: 256 KLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDE 315

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECF 4
           A +++  M  +D    T +++   +NG + +A + F
Sbjct: 316 AREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVF 351



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/97 (31%), Positives = 59/97 (60%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISE 112
           +++  M  ++  +  +++S   +N +I+ A  +F ++  R+ + WN+MIAGY  + ++SE
Sbjct: 318 EVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSE 377

Query: 111 AVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           A+ LF  M  ++  +W  MI+ Y + GEM +A E FE
Sbjct: 378 ALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFE 414



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = -3

Query: 291 KIFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTR-NLVSWNTMIAGYLHNDQIS 115
           K+F+ M+ R+  SW  +I+   +   +  AR LF+ +P + +   WN MIAGY    +  
Sbjct: 100 KLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFD 159

Query: 114 EAVKLFGVMQRRDNFTWTLMITCYTRNGEMGKARECFE 1
           +A K+F  M  +D  ++  M+  YT+NG+MG A + FE
Sbjct: 160 DAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFE 197



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/67 (37%), Positives = 43/67 (64%)
 Frame = -3

Query: 288 IFENMSTRNTVSWNSIISACAKNNQINHARTLFDEMPTRNLVSWNTMIAGYLHNDQISEA 109
           +F  M  +N VSWN++IS  A+  +++ A  +F+ M  RN++SWN++I G+L N    +A
Sbjct: 381 LFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDA 440

Query: 108 VKLFGVM 88
           +K   +M
Sbjct: 441 LKSLVLM 447