BLASTX nr result

ID: Coptis21_contig00021072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021072
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156571.1| PREDICTED: histone H2B.4-like [Cucumis sativus]   121   1e-25
ref|XP_004137790.1| PREDICTED: histone H2B.4-like [Cucumis sativus]   121   1e-25
ref|NP_180440.1| histone H2B [Arabidopsis thaliana] gi|75206064|...   121   1e-25
ref|NP_200799.1| histone H2B [Arabidopsis thaliana] gi|27735192|...   121   1e-25
ref|XP_002879182.1| hypothetical protein ARALYDRAFT_901825 [Arab...   121   1e-25

>ref|XP_004156571.1| PREDICTED: histone H2B.4-like [Cucumis sativus]
          Length = 138

 Score =  121 bits (304), Expect = 1e-25
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +3

Query: 381 PDIGISSKAMLIMNNFVNDFFEKLAQEASKLARFDKKHTITSREIQTAVRLLLPGELAQH 560
           PDIGISSKAM IMN+F+ND FEKLAQEASKLAR++KK TITSREIQTAVRL+LPGELA+H
Sbjct: 64  PDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKH 123

Query: 561 AVSEGMKAVAKFNSA 605
           AVSEG KAV KF S+
Sbjct: 124 AVSEGTKAVTKFTSS 138


>ref|XP_004137790.1| PREDICTED: histone H2B.4-like [Cucumis sativus]
          Length = 138

 Score =  121 bits (304), Expect = 1e-25
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +3

Query: 381 PDIGISSKAMLIMNNFVNDFFEKLAQEASKLARFDKKHTITSREIQTAVRLLLPGELAQH 560
           PDIGISSKAM IMN+F+ND FEKLAQEASKLAR++KK TITSREIQTAVRL+LPGELA+H
Sbjct: 64  PDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKH 123

Query: 561 AVSEGMKAVAKFNSA 605
           AVSEG KAV KF S+
Sbjct: 124 AVSEGTKAVTKFTSS 138


>ref|NP_180440.1| histone H2B [Arabidopsis thaliana]
           gi|75206064|sp|Q9SI96.3|H2B3_ARATH RecName: Full=Histone
           H2B.3; Short=HTB3 gi|13272409|gb|AAK17143.1|AF325075_1
           putative histone H2B [Arabidopsis thaliana]
           gi|4580384|gb|AAD24363.1| putative histone H2B
           [Arabidopsis thaliana] gi|16209685|gb|AAL14400.1|
           At2g28720/T11P11.3 [Arabidopsis thaliana]
           gi|21553526|gb|AAM62619.1| putative histone H2B
           [Arabidopsis thaliana] gi|21700841|gb|AAM70544.1|
           At2g28720/T11P11.3 [Arabidopsis thaliana]
           gi|330253069|gb|AEC08163.1| histone H2B [Arabidopsis
           thaliana]
          Length = 151

 Score =  121 bits (304), Expect = 1e-25
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +3

Query: 381 PDIGISSKAMLIMNNFVNDFFEKLAQEASKLARFDKKHTITSREIQTAVRLLLPGELAQH 560
           PDIGISSKAM IMN+F+ND FEKLAQEASKLAR++KK TITSREIQTAVRL+LPGELA+H
Sbjct: 77  PDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKH 136

Query: 561 AVSEGMKAVAKFNSA 605
           AVSEG KAV KF S+
Sbjct: 137 AVSEGTKAVTKFTSS 151


>ref|NP_200799.1| histone H2B [Arabidopsis thaliana]
           gi|27735192|sp|P40283.5|H2B11_ARATH RecName:
           Full=Histone H2B.11; AltName: Full=HTB4
           gi|9757912|dbj|BAB08359.1| unnamed protein product
           [Arabidopsis thaliana] gi|16323079|gb|AAL15274.1|
           AT5g59910/mmn10_130 [Arabidopsis thaliana]
           gi|56236124|gb|AAV84518.1| At5g59910 [Arabidopsis
           thaliana] gi|98960893|gb|ABF58930.1| At5g59910
           [Arabidopsis thaliana] gi|332009867|gb|AED97250.1|
           histone H2B [Arabidopsis thaliana]
          Length = 150

 Score =  121 bits (304), Expect = 1e-25
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +3

Query: 381 PDIGISSKAMLIMNNFVNDFFEKLAQEASKLARFDKKHTITSREIQTAVRLLLPGELAQH 560
           PDIGISSKAM IMN+F+ND FEKLAQEASKLAR++KK TITSREIQTAVRL+LPGELA+H
Sbjct: 76  PDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKH 135

Query: 561 AVSEGMKAVAKFNSA 605
           AVSEG KAV KF S+
Sbjct: 136 AVSEGTKAVTKFTSS 150


>ref|XP_002879182.1| hypothetical protein ARALYDRAFT_901825 [Arabidopsis lyrata subsp.
           lyrata] gi|297325021|gb|EFH55441.1| hypothetical protein
           ARALYDRAFT_901825 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score =  121 bits (304), Expect = 1e-25
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +3

Query: 381 PDIGISSKAMLIMNNFVNDFFEKLAQEASKLARFDKKHTITSREIQTAVRLLLPGELAQH 560
           PDIGISSKAM IMN+F+ND FEKLAQEASKLAR++KK TITSREIQTAVRL+LPGELA+H
Sbjct: 80  PDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKH 139

Query: 561 AVSEGMKAVAKFNSA 605
           AVSEG KAV KF S+
Sbjct: 140 AVSEGTKAVTKFTSS 154


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