BLASTX nr result

ID: Coptis21_contig00021038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021038
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16330.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ...   193   1e-47
emb|CAN61379.1| hypothetical protein VITISV_037545 [Vitis vinifera]   193   1e-47
ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_003606366.1| CNGC5-like protein [Medicago truncatula] gi|...   181   4e-44

>emb|CBI16330.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  193 bits (491), Expect = 1e-47
 Identities = 83/115 (72%), Positives = 99/115 (86%)
 Frame = -1

Query: 347 VLGACWYLLSIERQESCWRQVCRLESNSCQDRFFDCHKINNSSRIAWFKSSNITTVCNPS 168
           VLGACWYLLSIERQE+CWR VC LE +SCQD +FDCHK+ +  R AWFKSSN+T +C+P+
Sbjct: 267 VLGACWYLLSIERQEACWRTVCNLEKSSCQDGYFDCHKVKDPGREAWFKSSNVTKLCDPN 326

Query: 167 SKYFQYGIYVDAVTFDVTSSTFFSKYFYCLWWGLRNLSSLGQNLSTSTFVGEISF 3
           + ++Q+GIY D+V  +VTSS FF KYFYCLWWGLRNLSSLGQNLSTST+VGEI F
Sbjct: 327 NTFYQFGIYADSVISEVTSSAFFEKYFYCLWWGLRNLSSLGQNLSTSTYVGEIIF 381


>ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Vitis vinifera]
          Length = 713

 Score =  193 bits (491), Expect = 1e-47
 Identities = 83/115 (72%), Positives = 99/115 (86%)
 Frame = -1

Query: 347 VLGACWYLLSIERQESCWRQVCRLESNSCQDRFFDCHKINNSSRIAWFKSSNITTVCNPS 168
           VLGACWYLLSIERQE+CWR VC LE +SCQD +FDCHK+ +  R AWFKSSN+T +C+P+
Sbjct: 267 VLGACWYLLSIERQEACWRTVCNLEKSSCQDGYFDCHKVKDPGREAWFKSSNVTKLCDPN 326

Query: 167 SKYFQYGIYVDAVTFDVTSSTFFSKYFYCLWWGLRNLSSLGQNLSTSTFVGEISF 3
           + ++Q+GIY D+V  +VTSS FF KYFYCLWWGLRNLSSLGQNLSTST+VGEI F
Sbjct: 327 NTFYQFGIYADSVISEVTSSAFFEKYFYCLWWGLRNLSSLGQNLSTSTYVGEIIF 381


>emb|CAN61379.1| hypothetical protein VITISV_037545 [Vitis vinifera]
          Length = 650

 Score =  193 bits (491), Expect = 1e-47
 Identities = 83/115 (72%), Positives = 99/115 (86%)
 Frame = -1

Query: 347 VLGACWYLLSIERQESCWRQVCRLESNSCQDRFFDCHKINNSSRIAWFKSSNITTVCNPS 168
           VLGACWYLLSIERQE+CWR VC LE +SCQD +FDCHK+ +  R AWFKSSN+T +C+P+
Sbjct: 204 VLGACWYLLSIERQEACWRTVCNLEKSSCQDGYFDCHKVKDPGREAWFKSSNVTKLCDPN 263

Query: 167 SKYFQYGIYVDAVTFDVTSSTFFSKYFYCLWWGLRNLSSLGQNLSTSTFVGEISF 3
           + ++Q+GIY D+V  +VTSS FF KYFYCLWWGLRNLSSLGQNLSTST+VGEI F
Sbjct: 264 NTFYQFGIYADSVISEVTSSAFFEKYFYCLWWGLRNLSSLGQNLSTSTYVGEIIF 318


>ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|222850691|gb|EEE88238.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  186 bits (472), Expect = 2e-45
 Identities = 82/117 (70%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 350 KVLGACWYLLSIERQESCWRQVCRLESNSCQDRFFDCHKINNSS-RIAWFKSSNITTVCN 174
           +VLGACWYLLSIERQE+CWR VC LE  SC+  FFDC ++++S  R +WFKSSNIT  CN
Sbjct: 306 QVLGACWYLLSIERQEACWRSVCNLEKLSCEYGFFDCRRVHDSPHRESWFKSSNITNFCN 365

Query: 173 PSSKYFQYGIYVDAVTFDVTSSTFFSKYFYCLWWGLRNLSSLGQNLSTSTFVGEISF 3
           P + Y+Q+GIY DA+ FDVT+++FF+KYFYC WWGLRNLSSLGQNLSTST+VGEI+F
Sbjct: 366 PDNNYYQFGIYGDALKFDVTTASFFNKYFYCFWWGLRNLSSLGQNLSTSTYVGEIAF 422


>ref|XP_003606366.1| CNGC5-like protein [Medicago truncatula]
           gi|355507421|gb|AES88563.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 685

 Score =  181 bits (460), Expect = 4e-44
 Identities = 78/115 (67%), Positives = 98/115 (85%)
 Frame = -1

Query: 347 VLGACWYLLSIERQESCWRQVCRLESNSCQDRFFDCHKINNSSRIAWFKSSNITTVCNPS 168
           VLGACWYLLSIERQE+CW+ VC+LE +SCQ  FFDC+ + +S R++WF +SN+T +C+P+
Sbjct: 246 VLGACWYLLSIERQEACWKSVCKLEESSCQFDFFDCNMVKDSLRVSWFVTSNVTNLCSPN 305

Query: 167 SKYFQYGIYVDAVTFDVTSSTFFSKYFYCLWWGLRNLSSLGQNLSTSTFVGEISF 3
           S ++Q+GIY DAVT  VT+S FF+KYF+CLWWGLRNLSSLGQ L TSTFVGEI F
Sbjct: 306 SLFYQFGIYGDAVTSKVTTSAFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMF 360


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