BLASTX nr result

ID: Coptis21_contig00021037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021037
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36665.3| unnamed protein product [Vitis vinifera]              152   1e-34
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   149   2e-33
emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]   149   2e-33
ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   146   1e-32
ref|XP_002273512.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   144   6e-32

>emb|CBI36665.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  152 bits (385), Expect = 1e-34
 Identities = 94/255 (36%), Positives = 136/255 (53%), Gaps = 17/255 (6%)
 Frame = -3

Query: 1213 TSEGENSEEREVTSCMDIN-----------------LEPFVGQEFKSEQEARAFYNGYAR 1085
            T +G  + E E++  +D N                 LEP VG EF+S ++AR FY  Y R
Sbjct: 40   TFDGHETAEDELSDSLDGNDDMVQQSIDNLPVSLEPLEPCVGMEFESAEDAREFYEMYGR 99

Query: 1084 YRGFSIRKGPLYRSWRDRTITSRIFVCFREGFRRETCDVNEKGNVKRRMAVTRVGCKAQL 905
              GF+IR     RS +D +I  R FVC +EGFR E    N +  +     +TR GC A L
Sbjct: 100  RMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRVEKY-ANREHRILPSRPITREGCNAML 158

Query: 904  WVKKQESGSWVVKQFQLVHNHELSPTNVHRLRSHRNMMDNVKEYVEILKGAGVDTCKIQS 725
             +  ++ G W +  F   HNHEL+P+ +   RSHR        + E ++G       I  
Sbjct: 159  RIAAKDEGKWAIYGFVKEHNHELNPSKMPPRRSHRIA------FCEDMRGHHWYGYVISC 212

Query: 724  LFVEEARGLGNVGVESEDKKKIRELQTELHRERRRSAAYREQLRLVLKDMEDHAHHLSQQ 545
              +     L N   + +   KIREL TELHRER++SAAY+EQL+ +LK +E+H H LS +
Sbjct: 213  TSL-----LFNTCPKDQKDLKIRELSTELHRERKKSAAYQEQLQTILKYIEEHTHRLSLK 267

Query: 544  IEDIVGDMKDLESRE 500
            +E +V ++++LES E
Sbjct: 268  VEIVVNNLRELESEE 282


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score =  149 bits (375), Expect = 2e-33
 Identities = 82/166 (49%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
 Frame = -3

Query: 1165 DINLEPFVGQEFKSEQEARAFYNGYARYRGFSIRKGPLYRSWRDRTITSRIFVCFREGFR 986
            D NLEP+ G EF+SE+ A+AFYN YAR  GFS R     RS RD  I  R FVC +EGFR
Sbjct: 61   DTNLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFR 120

Query: 985  RETCDVNEKGNVKRRMAVTRVGCKAQLWVKKQESGSWVVKQFQLVHNHEL-SPTNVHRLR 809
             +       G VKR  A TRVGCKA L VK Q+S  WVV  F   HNHEL  P  VH LR
Sbjct: 121  VDKEKPGRDGRVKRPRAETRVGCKAMLVVKIQDSSRWVVSGFVKEHNHELVPPDKVHCLR 180

Query: 808  SHRNMMDNVKEYVEILKGAGVDTCKIQSLFVEEARGLGNVGVESED 671
            SHR++    K  ++ L+GAG+    I S  ++E  G+ NVG    D
Sbjct: 181  SHRHVSGAAKSLIDTLQGAGIGPSGIMSALIKEYGGISNVGFTERD 226


>emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]
          Length = 737

 Score =  149 bits (375), Expect = 2e-33
 Identities = 82/166 (49%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
 Frame = -3

Query: 1165 DINLEPFVGQEFKSEQEARAFYNGYARYRGFSIRKGPLYRSWRDRTITSRIFVCFREGFR 986
            D NLEP+ G EF+SE+ A+AFYN YAR  GFS R     RS RD  I  R FVC +EGFR
Sbjct: 61   DTNLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFR 120

Query: 985  RETCDVNEKGNVKRRMAVTRVGCKAQLWVKKQESGSWVVKQFQLVHNHEL-SPTNVHRLR 809
             +       G VKR  A TRVGCKA L VK Q+S  WVV  F   HNHEL  P  VH LR
Sbjct: 121  VDKEKPGRDGRVKRPRAETRVGCKAMLVVKIQDSSRWVVSGFVKEHNHELVPPDKVHCLR 180

Query: 808  SHRNMMDNVKEYVEILKGAGVDTCKIQSLFVEEARGLGNVGVESED 671
            SHR++    K  ++ L+GAG+    I S  ++E  G+ NVG    D
Sbjct: 181  SHRHVSGAAKSLIDTLQGAGIGPSGIMSALIKEYGGISNVGFTERD 226


>ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 790

 Score =  146 bits (369), Expect = 1e-32
 Identities = 82/166 (49%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
 Frame = -3

Query: 1165 DINLEPFVGQEFKSEQEARAFYNGYARYRGFSIRKGPLYRSWRDRTITSRIFVCFREGFR 986
            D NLEP  G EF+SE+ A+AFYN YAR  GFS R     RS RD +I  R FVC +EGFR
Sbjct: 64   DTNLEPCQGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFR 123

Query: 985  RETCDVNEKGNVKRRMAVTRVGCKAQLWVKKQESGSWVVKQFQLVHNHEL-SPTNVHRLR 809
             E       G VKR  A TRVGCKA L VK Q+SG WVV  F   HNHEL  P  VH LR
Sbjct: 124  VEREKHLVDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFLKEHNHELVPPDKVHCLR 183

Query: 808  SHRNMMDNVKEYVEILKGAGVDTCKIQSLFVEEARGLGNVGVESED 671
            SHR++    K  ++ L+GAG+    I S  ++E   + N+G    D
Sbjct: 184  SHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGAISNIGFTERD 229


>ref|XP_002273512.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 759

 Score =  144 bits (362), Expect = 6e-32
 Identities = 85/189 (44%), Positives = 105/189 (55%), Gaps = 10/189 (5%)
 Frame = -3

Query: 1207 EGENSEEREVTSCM---------DINLEPFVGQEFKSEQEARAFYNGYARYRGFSIRKGP 1055
            EG N E  E +S           D NLEP  G EF SEQ AR FYN YAR  GFS R   
Sbjct: 35   EGYNGEMMENSSAAGRDSLALNGDPNLEPSEGMEFDSEQAARIFYNSYARRIGFSTRVSV 94

Query: 1054 LYRSWRDRTITSRIFVCFREGFRRETCDVNEKGNVKRRMAVTRVGCKAQLWVKKQESGSW 875
              RS RD +I  R  VC REGFRRE      +   KR+  VTRVGCKAQ+ VKKQ SG W
Sbjct: 95   YQRSRRDGSIICRQIVCSREGFRRE----GGENRSKRQRTVTRVGCKAQMTVKKQNSGKW 150

Query: 874  VVKQFQLVHNHEL-SPTNVHRLRSHRNMMDNVKEYVEILKGAGVDTCKIQSLFVEEARGL 698
             V +    HNH+L  P  VH LRSHR++    +  ++ L+ AG+    + S+ ++E+ G+
Sbjct: 151  AVTKLVKEHNHDLVPPDKVHCLRSHRHVSGPARSLIDTLQAAGMGPSGVMSVLIKESGGI 210

Query: 697  GNVGVESED 671
             NVG    D
Sbjct: 211  NNVGFTKVD 219


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