BLASTX nr result

ID: Coptis21_contig00021028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021028
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518269.1| PREDICTED: uncharacterized protein LOC100777...   218   2e-54
ref|XP_003615407.1| Polynucleotidyl transferase [Medicago trunca...   150   5e-34
ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28
ref|XP_003637168.1| Polynucleotidyl transferase [Medicago trunca...   130   5e-28
gb|EEC84135.1| hypothetical protein OsI_30480 [Oryza sativa Indi...   120   5e-25

>ref|XP_003518269.1| PREDICTED: uncharacterized protein LOC100777373 [Glycine max]
          Length = 3038

 Score =  218 bits (555), Expect = 2e-54
 Identities = 113/216 (52%), Positives = 145/216 (67%)
 Frame = -3

Query: 863 MAESTKFHPALTITNVKSLVPVTLDNEQALYHSWAALFTNLTRVHDLYDHIVPPTEEPAR 684
           MA+  KFH +LTITNVKSL+P+TLD E  +Y+SWA LF  L RVHDL+ HI+ PTE    
Sbjct: 1   MADQPKFHHSLTITNVKSLIPITLDAEHDMYYSWATLFKVLVRVHDLHHHIISPTEAHEV 60

Query: 683 AAYLAAKSAEPAMWKRLDAAILQWIYGTISSDLLLAILRRNDTAEGAWKRLEALFQDNKA 504
           AAY+A+K+  P +WK LDAA                                    DNKA
Sbjct: 61  AAYVASKATYPVLWKSLDAA------------------------------------DNKA 84

Query: 503 SRATHLEEDFTNAVFEDHHTIDNYCNYLQSIADRLADVDAPVSNGRLVLRLTGSLPEAYS 324
           SRAT+LEE+  +  F++  +ID+YCN+++S+AD+LADVDAP++N RLVL+L   LP+AY+
Sbjct: 85  SRATYLEEELADLNFKNFSSIDSYCNHIKSLADQLADVDAPLTNNRLVLKLMAGLPKAYA 144

Query: 323 GTVDFIQNQEPLPSFESCRSRLKMAERTIKARVARE 216
           G VD IQNQEPL SF SCRSRLK+AERTIK R+A+E
Sbjct: 145 GMVDIIQNQEPLSSFASCRSRLKLAERTIKNRLAKE 180


>ref|XP_003615407.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355516742|gb|AES98365.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 218

 Score =  150 bits (380), Expect = 5e-34
 Identities = 83/217 (38%), Positives = 119/217 (54%)
 Frame = -3

Query: 857 ESTKFHPALTITNVKSLVPVTLDNEQALYHSWAALFTNLTRVHDLYDHIVPPTEEPARAA 678
           +  KFH A  ITNVKS++ +TLDN+   Y SW+ALF     V+++  HI+ PT+E  +  
Sbjct: 21  QQPKFHSAFGITNVKSIITITLDNDSRHYLSWSALFQVQACVYNMLAHIIIPTDEKEKRK 80

Query: 677 YLAAKSAEPAMWKRLDAAILQWIYGTISSDLLLAILRRNDTAEGAWKRLEALFQDNKASR 498
             A K  +P +WKRLDA +L                               +FQDNK SR
Sbjct: 81  AEATKKNDPGLWKRLDAVVL----------------------------FATMFQDNKHSR 112

Query: 497 ATHLEEDFTNAVFEDHHTIDNYCNYLQSIADRLADVDAPVSNGRLVLRLTGSLPEAYSGT 318
           A +LE  FTN   ED  +   YCN L+ + D+LA+ D PV+N RLVL++   L E+Y+G 
Sbjct: 113 AVNLEHQFTNTNLEDFSSTKAYCNRLKLLGDQLANDDTPVNNTRLVLKMIYGLTESYAGF 172

Query: 317 VDFIQNQEPLPSFESCRSRLKMAERTIKARVARESGT 207
           + +I   +PLP+FE  +S L++ E T+  RV   + T
Sbjct: 173 ITYIWQHDPLPTFEMEKSWLELEESTMGQRVLHANPT 209


>ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|222838337|gb|EEE76702.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  132 bits (332), Expect = 2e-28
 Identities = 66/151 (43%), Positives = 95/151 (62%)
 Frame = -3

Query: 665 KSAEPAMWKRLDAAILQWIYGTISSDLLLAILRRNDTAEGAWKRLEALFQDNKASRATHL 486
           +  +P +W R+DA +LQWIYGTIS DLL  IL R+ TA  AW RL  +F DNK SRA +L
Sbjct: 8   QDTDPDLWSRVDAIVLQWIYGTISEDLLNIILERDSTAALAWNRLRDIFSDNKNSRALYL 67

Query: 485 EEDFTNAVFEDHHTIDNYCNYLQSIADRLADVDAPVSNGRLVLRLTGSLPEAYSGTVDFI 306
           E++F+    E      +YC +L+S++D+L++V +PV+N RLVL+L   L +AY+     I
Sbjct: 68  EQEFSKVQMEHFADASSYCQHLKSLSDQLSNVGSPVTNERLVLQLASGLTDAYASVGSQI 127

Query: 305 QNQEPLPSFESCRSRLKMAERTIKARVARES 213
            + + LP F   RS L + E T   + A+ S
Sbjct: 128 HHGDSLPPFYKSRSMLVLEETTRTKKAAQTS 158


>ref|XP_003637168.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355503103|gb|AES84306.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 239

 Score =  130 bits (328), Expect = 5e-28
 Identities = 76/193 (39%), Positives = 103/193 (53%)
 Frame = -3

Query: 767 SWAALFTNLTRVHDLYDHIVPPTEEPARAAYLAAKSAEPAMWKRLDAAILQWIYGTISSD 588
           ++A LF    R H +  HIVP  +           SAE   W  LD+ +LQWIY TIS+D
Sbjct: 17  AFAELFRIQARSHRVLHHIVPSKDNTTPTD---TSSAEFEQWTTLDSTVLQWIYSTISTD 73

Query: 587 LLLAILRRNDTAEGAWKRLEALFQDNKASRATHLEEDFTNAVFEDHHTIDNYCNYLQSIA 408
           LL  IL  + T   AW R   +FQDN+ +RA  LE++F+N   ED   + NYC  L+ ++
Sbjct: 74  LLTTILEPDSTTMEAWNRSSDIFQDNQNARAVTLEQEFSNTRMEDFPNVSNYCQRLKMLS 133

Query: 407 DRLADVDAPVSNGRLVLRLTGSLPEAYSGTVDFIQNQEPLPSFESCRSRLKMAERTIKAR 228
           D+L +V +PV+N  LVL+L    P+AY      I    PLP F   RS L + E    A 
Sbjct: 134 DQLRNVGSPVNNHHLVLQLIYGPPKAYRSVATLICQNNPLPKFYQARSMLTLEE----AC 189

Query: 227 VARESGTRVGTAM 189
           +A+ S T    AM
Sbjct: 190 MAKMSNTGSHAAM 202


>gb|EEC84135.1| hypothetical protein OsI_30480 [Oryza sativa Indica Group]
          Length = 486

 Score =  120 bits (302), Expect = 5e-25
 Identities = 64/192 (33%), Positives = 98/192 (51%)
 Frame = -3

Query: 839 PALTITNVKSLVPVTLDNEQALYHSWAALFTNLTRVHDLYDHIVPPTEEPARAAYLAAKS 660
           PA+++ NVK+LVP+ LD   A +  W  LF      +DL DH++     PA  +      
Sbjct: 307 PAVSVLNVKALVPINLDVNAANFTRWRGLFLVTVGKYDLTDHVLSDAHHPANLS------ 360

Query: 659 AEPAMWKRLDAAILQWIYGTISSDLLLAILRRNDTAEGAWKRLEALFQDNKASRATHLEE 480
                W ++D  +L W+YGTIS DLL  ++  + TA   W+ LE  F  N   RA +L  
Sbjct: 361 -----WLQMDCVVLGWLYGTISVDLLQEVMAHDATARSVWRALELQFLGNNEQRALNLNV 415

Query: 479 DFTNAVFEDHHTIDNYCNYLQSIADRLADVDAPVSNGRLVLRLTGSLPEAYSGTVDFIQN 300
           +F     + H ++++YC  ++++AD LAD+  PV++  L+L     L   +      I  
Sbjct: 416 EF-RTFHQGHLSVNDYCRRMKAMADSLADLGDPVTDRGLILATLNGLSAKFQNLKTIITM 474

Query: 299 QEPLPSFESCRS 264
           Q P PSF   RS
Sbjct: 475 QRPFPSFADVRS 486


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