BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021004
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   156   2e-36
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   153   2e-35
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   147   9e-34
ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi...   147   1e-33

>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/117 (65%), Positives = 87/117 (74%)
 Frame = -3

Query: 353  QGNTLSTEDLRDLFTFHENSRSEIHEKMNCIRCTTCNLEVESADTVRNVGAGSDSGDVCE 174
            QGN LSTEDLRDLF+FHEN RSEIHEKMNC RC   +   ES        + ++     +
Sbjct: 675  QGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNYDERPESVREEDGFKSKNEGCQSYQ 734

Query: 173  VDEDDIGGFAAISGCLHKLKNSEKQIGSPLEEDLGSWGHHISPTSVPDAILQASAGD 3
            +D DDIGGFA I+GCLHKLK SEKQ+G+PLEEDLGSWGHH   TSVPDAI QASAGD
Sbjct: 735  MDCDDIGGFAGITGCLHKLKRSEKQVGTPLEEDLGSWGHHFFSTSVPDAIFQASAGD 791


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/117 (64%), Positives = 86/117 (73%)
 Frame = -3

Query: 353  QGNTLSTEDLRDLFTFHENSRSEIHEKMNCIRCTTCNLEVESADTVRNVGAGSDSGDVCE 174
            QGN LSTEDLRDLF+FHEN RSEIHEKMNC RC   +   ES        + ++     +
Sbjct: 696  QGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNYDERPESVREEDGFESKNEGCQSYQ 755

Query: 173  VDEDDIGGFAAISGCLHKLKNSEKQIGSPLEEDLGSWGHHISPTSVPDAILQASAGD 3
            +D DDIGGFA I+GCLHKLK SEKQ+G+ LEEDLGSWGHH   TSVPDAI QASAGD
Sbjct: 756  MDCDDIGGFAGITGCLHKLKRSEKQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGD 812


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/117 (64%), Positives = 86/117 (73%)
 Frame = -3

Query: 353  QGNTLSTEDLRDLFTFHENSRSEIHEKMNCIRCTTCNLEVESADTVRNVGAGSDSGDVCE 174
            QGN LSTEDLRDLF+FHEN RSEIHEKMNC RC   +   ES        + ++     +
Sbjct: 874  QGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNYDERPESVREEDGFESKNEGCQSYQ 933

Query: 173  VDEDDIGGFAAISGCLHKLKNSEKQIGSPLEEDLGSWGHHISPTSVPDAILQASAGD 3
            +D DDIGGFA I+GCLHKLK SEKQ+G+ LEEDLGSWGHH   TSVPDAI QASAGD
Sbjct: 934  MDCDDIGGFAGITGCLHKLKRSEKQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGD 990


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score =  147 bits (371), Expect = 9e-34
 Identities = 80/119 (67%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353  QGNTLSTEDLRDLFTFHENSRSEIHEKMNCIRCTTCNLEVESADTVRNVGAGSDSGDVCE 174
            QGN LSTE+LRDLFTFHEN +SEIHE M C RC T        D  R+  A S   D  E
Sbjct: 686  QGNLLSTENLRDLFTFHENIKSEIHENMQCSRCQTF-------DGPRSTEAQSTITD-SE 737

Query: 173  VDED--DIGGFAAISGCLHKLKNSEKQIGSPLEEDLGSWGHHISPTSVPDAILQASAGD 3
             DE+  DIGGFA I+GCL  LK SEKQ+GSPLEEDLGSWGHH  PTSVPDAILQASAGD
Sbjct: 738  SDEETSDIGGFAEIAGCLQNLKRSEKQVGSPLEEDLGSWGHHFFPTSVPDAILQASAGD 796


>ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi|332642688|gb|AEE76209.1|
            Rad54-like protein [Arabidopsis thaliana]
          Length = 908

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/120 (59%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
 Frame = -3

Query: 353  QGNTLSTEDLRDLFTFHENSRSEIHEKMNCIRCTTCNLEVESADTVRNVGAGSDSG---D 183
            QGN LSTEDLRDLF+FH + RSEIHEKM+C RC         A    N+  G+++    +
Sbjct: 692  QGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQN------DASGTENIEEGNENNVDDN 745

Query: 182  VCEVDEDDIGGFAAISGCLHKLKNSEKQIGSPLEEDLGSWGHHISPTSVPDAILQASAGD 3
             C++D++DIGGFA  +GC + LKNSE+Q+G+PLEEDLGSWGHH +  SVPDAILQASAGD
Sbjct: 746  ACQIDQEDIGGFAKDAGCFNLLKNSERQVGTPLEEDLGSWGHHFTSKSVPDAILQASAGD 805