BLASTX nr result

ID: Coptis21_contig00020967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020967
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058451.1| Os06g0695600 [Oryza sativa Japonica Group] g...    59   2e-06
ref|XP_002525571.1| zinc finger protein, putative [Ricinus commu...    59   2e-06
gb|EEC81243.1| hypothetical protein OsI_24310 [Oryza sativa Indi...    58   3e-06

>ref|NP_001058451.1| Os06g0695600 [Oryza sativa Japonica Group]
           gi|53791836|dbj|BAD53902.1| putative DNA binding zinc
           finger protein [Oryza sativa Japonica Group]
           gi|113596491|dbj|BAF20365.1| Os06g0695600 [Oryza sativa
           Japonica Group] gi|215694615|dbj|BAG89806.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222636148|gb|EEE66280.1| hypothetical protein
           OsJ_22486 [Oryza sativa Japonica Group]
          Length = 579

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/94 (29%), Positives = 53/94 (56%)
 Frame = -1

Query: 377 ILELEVRTESHVTCGDEEEFIQQIEKDLYGGIDSSKVSSGELRFEKKELEEAECRICFKE 198
           +L LE R  S  T   +E+ ++ +++++Y      K+ + +L   +  L++A+C IC +E
Sbjct: 478 LLALEERIGSVSTALSDEQLVKCLKRNVY------KLPNSDLEANRAVLDDAKCSICQEE 531

Query: 197 LSGKLDITRMPCEHTFHRRCLYTRLPKNNTCPLC 96
                ++ RM CEH +H  C++  L + N CP+C
Sbjct: 532 YIEGEEVGRMQCEHQYHVSCIHEWLRQKNWCPIC 565


>ref|XP_002525571.1| zinc finger protein, putative [Ricinus communis]
           gi|223535150|gb|EEF36830.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 252

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
 Frame = -1

Query: 395 PDKITLILELEVRTESHVTCGDEEEFIQQIEKDLYGGIDSSKVSSGE-------LRFEKK 237
           PD++  ++ ++V+ E+HV C + +  +  I  D+       K            +R  + 
Sbjct: 136 PDRVVPVV-VQVKVETHVACWESD--VPSILSDVLSSRKQPKQIETSVLQLYTMIRRSEV 192

Query: 236 ELEEAECRICFKELSGKLDITRMPCEHTFHRRCLYTRLPKNNTCPLC 96
              + +C ICF+EL      T +PC H FH +C+ T L  N +CPLC
Sbjct: 193 STPDRQCVICFEELGAGSRATALPCSHIFHTQCILTWLDNNLSCPLC 239


>gb|EEC81243.1| hypothetical protein OsI_24310 [Oryza sativa Indica Group]
          Length = 540

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 28/94 (29%), Positives = 53/94 (56%)
 Frame = -1

Query: 377 ILELEVRTESHVTCGDEEEFIQQIEKDLYGGIDSSKVSSGELRFEKKELEEAECRICFKE 198
           +L LE R  S  T   +E+ ++ +++++Y      K+ + +L   +  L++A+C IC +E
Sbjct: 439 LLALEERIGSVSTALSDEQLVKCLKRNVY------KLPNSDLEANRAVLDDAKCSICQEE 492

Query: 197 LSGKLDITRMPCEHTFHRRCLYTRLPKNNTCPLC 96
                ++ RM CEH +H  C++  L + N CP+C
Sbjct: 493 YIEGEEVGRMQCEHQYHVPCIHEWLRQKNWCPIC 526


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