BLASTX nr result

ID: Coptis21_contig00020951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020951
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCA...   285   1e-74
ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|22354891...   279   7e-73
ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...   273   5e-71
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...   271   2e-70

>ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
           gi|147867329|emb|CAN81187.1| hypothetical protein
           VITISV_029906 [Vitis vinifera]
           gi|296089162|emb|CBI38865.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  285 bits (728), Expect = 1e-74
 Identities = 142/180 (78%), Positives = 153/180 (85%)
 Frame = -1

Query: 565 SGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRAHVMEIANGCDVVDSVSAFARRR 386
           S GDGEITRRPRGRPAGSKNKPKPPIIITRDSANALR+HVMEIA GCD++DS++ FARRR
Sbjct: 74  SSGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIATGCDIMDSLNTFARRR 133

Query: 385 QRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPPPAPPSATGLTIYXX 206
           QRGICILSGSGTVTNVTLRQPA+PGA+VTLHGRFEILSLSGSFLPPPAPP+A+GLTIY  
Sbjct: 134 QRGICILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLA 193

Query: 205 XXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAYERLPLEDEEPQLPMQSGGPLDSPGMVG 26
                             GPVVIMAASFGNAAYERLPLEDEEPQ+P+   GPL SPGMVG
Sbjct: 194 GGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEEPQVPIPGSGPLGSPGMVG 253


>ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|223548914|gb|EEF50403.1| ESC,
           putative [Ricinus communis]
          Length = 299

 Score =  279 bits (713), Expect = 7e-73
 Identities = 142/215 (66%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
 Frame = -1

Query: 667 NSEDDEGNSGLXXXXXXXXXXXXXXXDSQDMVALSGG-DGEITRRPRGRPAGSKNKPKPP 491
           NSED++  +G                + +++V  +GG DGE+TRRPRGRPAGSKNKPKPP
Sbjct: 40  NSEDEQTGNGSINRGQKREHDEITTPEGKELVPTTGGGDGEMTRRPRGRPAGSKNKPKPP 99

Query: 490 IIITRDSANALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPG 311
           IIITRDSANALR+HVMEIANG D+++SVS FARRRQRG+CILSG+GTVTNVTLRQPA+PG
Sbjct: 100 IIITRDSANALRSHVMEIANGSDIMESVSTFARRRQRGVCILSGTGTVTNVTLRQPASPG 159

Query: 310 AIVTLHGRFEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMA 131
           A+VTLHGRFEILSLSGSFLPPPAPP+A+GLTIY                    GPVVIMA
Sbjct: 160 AVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMA 219

Query: 130 ASFGNAAYERLPLEDEEPQLPMQSGGPLDSPGMVG 26
           ASFGNAAYERLPLE+++ Q+P+   GPLDSPG+VG
Sbjct: 220 ASFGNAAYERLPLEEDDGQVPVPGSGPLDSPGVVG 254


>ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  275 bits (702), Expect = 1e-71
 Identities = 136/186 (73%), Positives = 155/186 (83%)
 Frame = -1

Query: 583 QDMVALSGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRAHVMEIANGCDVVDSVS 404
           Q+++    GDGEITRRPRGRPAGSKNKPKPPIIITRDSANALR H+ME+A+GCD+V+SV+
Sbjct: 72  QELITSGDGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHLMEVADGCDIVESVA 131

Query: 403 AFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPPPAPPSATG 224
            FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGRFEILSL+GSFLPPPAPP+ATG
Sbjct: 132 TFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGRFEILSLAGSFLPPPAPPAATG 191

Query: 223 LTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAYERLPLEDEEPQLPMQSGGPLD 44
           LTIY                    GPVVIMAASF NAAYERLPLE+E+PQ+PMQ GG + 
Sbjct: 192 LTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAYERLPLEEEDPQMPMQGGG-MG 250

Query: 43  SPGMVG 26
           SPG VG
Sbjct: 251 SPGGVG 256


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score =  273 bits (697), Expect = 5e-71
 Identities = 149/219 (68%), Positives = 166/219 (75%), Gaps = 5/219 (2%)
 Frame = -1

Query: 667 NSEDDE-GNSGLXXXXXXXXXXXXXXXDS----QDMVALSGGDGEITRRPRGRPAGSKNK 503
           NSED++ G+SGL               +      +MV LSG DGEI+RRPRGRPAGSKNK
Sbjct: 36  NSEDEQSGSSGLNRGQKRDRDDNNENTNGGSEGNEMVGLSG-DGEISRRPRGRPAGSKNK 94

Query: 502 PKPPIIITRDSANALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQP 323
           PKPPIIITRDSANALR HVMEIA+GCD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQP
Sbjct: 95  PKPPIIITRDSANALRTHVMEIADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQP 154

Query: 322 AAPGAIVTLHGRFEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPV 143
           A+PGAIVTLHGRFEILSLSGSFLPPPAPP+ATGLTIY                    GPV
Sbjct: 155 ASPGAIVTLHGRFEILSLSGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGQLLASGPV 214

Query: 142 VIMAASFGNAAYERLPLEDEEPQLPMQSGGPLDSPGMVG 26
           VIMAASF NAAYERLPLE+E+P LPM  GG L SPG VG
Sbjct: 215 VIMAASFSNAAYERLPLEEEDPALPM-PGGSLGSPGGVG 252


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  271 bits (693), Expect = 2e-70
 Identities = 133/186 (71%), Positives = 155/186 (83%)
 Frame = -1

Query: 583 QDMVALSGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRAHVMEIANGCDVVDSVS 404
           ++++    G+GEITRRPRGRP+GSKNKPKPPIIITRDSANALR H+ME+A+GCD+V+SV+
Sbjct: 73  KELITSGSGEGEITRRPRGRPSGSKNKPKPPIIITRDSANALRTHLMEVADGCDIVESVA 132

Query: 403 AFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPPPAPPSATG 224
            FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGRFEILSL+GSFLPPPAPP+ATG
Sbjct: 133 TFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGRFEILSLAGSFLPPPAPPAATG 192

Query: 223 LTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAYERLPLEDEEPQLPMQSGGPLD 44
           LTIY                    GPVVIMAASF NAAYERLPLE+E+PQ+PMQ GG + 
Sbjct: 193 LTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAYERLPLEEEDPQMPMQ-GGEMG 251

Query: 43  SPGMVG 26
           SPG VG
Sbjct: 252 SPGAVG 257


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