BLASTX nr result

ID: Coptis21_contig00020945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020945
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510978.1| conserved hypothetical protein [Ricinus comm...   179   1e-42
ref|XP_002869687.1| hypothetical protein ARALYDRAFT_914065 [Arab...   167   7e-39
ref|XP_002304403.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38
ref|XP_002326789.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38
emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|72693...   166   1e-38

>ref|XP_002510978.1| conserved hypothetical protein [Ricinus communis]
            gi|223550093|gb|EEF51580.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 342

 Score =  179 bits (455), Expect = 1e-42
 Identities = 108/271 (39%), Positives = 152/271 (56%), Gaps = 7/271 (2%)
 Frame = +1

Query: 427  LPTWHSSSFYDSDVWDDWETVDDGENDDGIVNRVYDINRFVFGPVPSRDEVDDAVSSLQH 606
            + +W S   + SD ++ W +VD  E +          + FV GPVPS DEV  AVS+L  
Sbjct: 88   ITSWPS---FSSDEYE-WVSVDGSEEEKSF-------DDFVLGPVPSLDEVHSAVSALTQ 136

Query: 607  FLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTMMQ 786
                ASYSQFI D  + + +    +  S P G++HR      E +WMEPS  L NS M+Q
Sbjct: 137  VFDAASYSQFITDKFAYNVDRPVADQISSPTGILHRASPVCPEADWMEPSPHLCNSRMLQ 196

Query: 787  SHGGQAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEIN--- 957
             +G    RVYDAF +L+N+PS+QR V+SLS+DKAVW AVLNN+VVRELR++Y  E N   
Sbjct: 197  RYGPD--RVYDAFHLLQNEPSIQRMVISLSSDKAVWNAVLNNDVVRELRETYNTEENNTL 254

Query: 958  -MPQNSDES---PIPGKNVLWWILDNSKAKVMELIEKVTKLLSEVFQPSQMEKDXXXXXX 1125
              P+ SDE+     P  N + WI  N+KAK ME+++K+T L++ +F+   +E +      
Sbjct: 255  PTPEGSDETSHDSNPATNAVKWIFQNTKAKFMEVLDKITMLMNVLFKAPDVENN----AT 310

Query: 1126 XXXDMFQETXXXXXXXXXXXXXXXXMTRSHR 1218
               D F+E                 +TR+HR
Sbjct: 311  GTVDPFEERLRTSFLLSVVVLLVVVVTRAHR 341


>ref|XP_002869687.1| hypothetical protein ARALYDRAFT_914065 [Arabidopsis lyrata subsp.
            lyrata] gi|297315523|gb|EFH45946.1| hypothetical protein
            ARALYDRAFT_914065 [Arabidopsis lyrata subsp. lyrata]
          Length = 345

 Score =  167 bits (423), Expect = 7e-39
 Identities = 92/217 (42%), Positives = 134/217 (61%), Gaps = 5/217 (2%)
 Frame = +1

Query: 448  SFYDSDVWDDWETVDDGENDDGIVNRVYDINRFVFGPVPSRDEVDDAVSSLQHFLAPASY 627
            SF +S  ++D+E V + E+D             +FG VPS DEV DAVS+LQ     +SY
Sbjct: 96   SFVNSGGYEDFEWVSEEEDDS------------LFGSVPSVDEVQDAVSALQQVFDASSY 143

Query: 628  SQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTMMQSHGGQAA 807
            +Q + D      E+   N +    G++H+VPS GS+ +WMEPS+QL +S  +Q H     
Sbjct: 144  TQLVRDKYECYPESGGENQSPIATGMVHQVPSFGSDSDWMEPSMQLCHSRTLQPHAYD-- 201

Query: 808  RVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEINMPQNSDESPI 987
            +VY+AF +L+ +PSVQ+ VVSLS+DKAVWEAV+NN VVRE+RD Y   I+  + S E   
Sbjct: 202  QVYNAFDLLRTEPSVQKMVVSLSSDKAVWEAVMNNNVVREIRDLYNNGISQDEESSED-T 260

Query: 988  PGKN-----VLWWILDNSKAKVMELIEKVTKLLSEVF 1083
            PG+N      + W+ DN+  K  E+  K+TK+++E+F
Sbjct: 261  PGENNAAVDFIKWVFDNTMVKATEVFVKITKVVTELF 297


>ref|XP_002304403.1| predicted protein [Populus trichocarpa] gi|222841835|gb|EEE79382.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  166 bits (420), Expect = 1e-38
 Identities = 104/235 (44%), Positives = 143/235 (60%), Gaps = 8/235 (3%)
 Frame = +1

Query: 424  PLPT-WHSSSFYDSDVWDDWETVDDGENDDGIVNRVYDINRFVFGPVPSRDEVDDAVSSL 600
            P PT W   S    D +D W +VDDG +++  V    D   FVFGPVPS DEV +AV++L
Sbjct: 81   PGPTSWSPFSVSHCDDYD-WVSVDDGSDEERPVGFDDD---FVFGPVPSIDEVHEAVTAL 136

Query: 601  QHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTM 780
             H     S+SQ I D  S + + D     S P  L++RV S GSE++W EPS    +   
Sbjct: 137  THVFDAPSHSQLIRDKFSCTVDKDLAYQISGPT-LLNRVSSVGSELDWKEPSPVPCDPRA 195

Query: 781  MQSHGGQAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEINM 960
            +  +G Q  RV++AFR+L+ + SVQ+ VVSLS+DKAVW+AVLNN  VRELR++Y A+ N 
Sbjct: 196  LLCYGSQ--RVHEAFRLLQTESSVQKMVVSLSSDKAVWDAVLNNAAVRELRETYYADENT 253

Query: 961  -PQNSD------ESPIPGKNVLWWILDNSKAKVMELIEKVTKLLSEVFQPSQMEK 1104
             P  S+      E   P  N + WI DN++A+ ME+ E +TKL++E F+P   EK
Sbjct: 254  DPPTSESLAETGEESNPALNFVKWIFDNTRARAMEIFETITKLVNEFFKPPAGEK 308


>ref|XP_002326789.1| predicted protein [Populus trichocarpa] gi|222834111|gb|EEE72588.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  166 bits (420), Expect = 1e-38
 Identities = 102/236 (43%), Positives = 145/236 (61%), Gaps = 9/236 (3%)
 Frame = +1

Query: 424  PLPTWHSS--SFYDSDVWDDWETVDDGENDDGIVNRVYDINRFVFGPVPSRDEVDDAVSS 597
            P+ TW  S    Y  D   +W +VD+ E D+ +V    D   FV GPVPS DEV DAV++
Sbjct: 83   PISTWWPSFTGSYPDDY--EWVSVDESE-DERLVGFSDD---FVLGPVPSMDEVHDAVTA 136

Query: 598  LQHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNST 777
            L H      YSQ I D  + + + D  +  S  P ++ +V S GS+ +W EPS  L N  
Sbjct: 137  LTHVFDAPLYSQLIRDKFACTVDKDLADQIS-SPAVLSQVSSVGSDFDWKEPSPALCNQR 195

Query: 778  MMQSHGGQAARVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEIN 957
             + S+G     V++AF +L  +PSVQ+ VVSLS+DKAVW+AVLNN VV+ELR++Y A+ N
Sbjct: 196  ALHSYGSHT--VHEAFHLLLTEPSVQKMVVSLSSDKAVWDAVLNNAVVQELRETYYADEN 253

Query: 958  ----MPQNSDES---PIPGKNVLWWILDNSKAKVMELIEKVTKLLSEVFQPSQMEK 1104
                  ++SDE+     P  N + WI DN++A+V+E+IE VTKL++E+F+P   EK
Sbjct: 254  TDPLTSESSDETGEETNPALNFVKWIFDNTRARVVEVIETVTKLVNELFKPPADEK 309


>emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|7269367|emb|CAB79426.1|
            putative protein [Arabidopsis thaliana]
          Length = 336

 Score =  166 bits (420), Expect = 1e-38
 Identities = 91/216 (42%), Positives = 135/216 (62%), Gaps = 4/216 (1%)
 Frame = +1

Query: 448  SFYDSDVWDDWETVDDGENDDGIVNRVYDINRFVFGPVPSRDEVDDAVSSLQHFLAPASY 627
            SF +S  +DD+E V + E+D             +FG VPS DEV DAVS+LQ     +SY
Sbjct: 89   SFVNSGGYDDFEWVSEEEDDS------------LFGSVPSVDEVQDAVSALQQVFDASSY 136

Query: 628  SQFILDGMSSSSENDSVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTMMQSHGGQAA 807
            SQ + D      EN   N +    G++H+VPS GS+ +WMEPS+ L +S  ++ H     
Sbjct: 137  SQLVRDKYECYPENGGGNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSRTLKPHAYD-- 194

Query: 808  RVYDAFRMLKNDPSVQRAVVSLSTDKAVWEAVLNNEVVRELRDSYEAEINM-PQNSDESP 984
            +VY+AF +L+ +PSVQ+ VVSLS+DKAVWEAV+NN+VVRE+RD Y   I+   +NS+++P
Sbjct: 195  QVYNAFDLLRTEPSVQKMVVSLSSDKAVWEAVMNNDVVREIRDLYNNGISQDEENSEDTP 254

Query: 985  IPGK---NVLWWILDNSKAKVMELIEKVTKLLSEVF 1083
                   + + W+ DN+  K  E+  K+TK+++E+F
Sbjct: 255  RENNAATDFIKWVFDNTMVKATEVFVKITKVVTELF 290


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