BLASTX nr result

ID: Coptis21_contig00020943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020943
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312125.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_003522189.1| PREDICTED: LOW QUALITY PROTEIN: putative pep...   125   5e-27
ref|XP_002277582.1| PREDICTED: putative peptide/nitrate transpor...   124   1e-26
emb|CAN73118.1| hypothetical protein VITISV_002486 [Vitis vinifera]   124   1e-26
ref|XP_003516904.1| PREDICTED: probable peptide/nitrate transpor...   123   1e-26

>ref|XP_002312125.1| predicted protein [Populus trichocarpa] gi|222851945|gb|EEE89492.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/103 (58%), Positives = 83/103 (80%)
 Frame = +3

Query: 3   GITILQRIGIGMVLSMLSMFIASGIERKRLRVAKRHVTVSGGLKGNVVVPMSIFWLAPQF 182
           GI++L+RIG G++ S+++M +A+ +ERKR ++A+  + V  G K NV +PMS+FWLAPQF
Sbjct: 418 GISVLKRIGSGLIFSVVAMSVAALVERKRQKIAEEDIDVLDGEK-NVELPMSVFWLAPQF 476

Query: 183 LINGIGDGFALVGMQEFFYDQVPDTMRSLGIALYFSALGIADF 311
           LI G+GDGF LVG+QEFFYDQVPD+MRSLG+A + S LG  +F
Sbjct: 477 LILGLGDGFTLVGLQEFFYDQVPDSMRSLGMAFFLSVLGAGNF 519


>ref|XP_003522189.1| PREDICTED: LOW QUALITY PROTEIN: putative peptide/nitrate
           transporter At2g37900-like [Glycine max]
          Length = 1019

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/103 (62%), Positives = 81/103 (78%)
 Frame = +3

Query: 3   GITILQRIGIGMVLSMLSMFIASGIERKRLRVAKRHVTVSGGLKGNVVVPMSIFWLAPQF 182
           GI+ILQRIGIGMV S+++M +A+ +E+KRL      V ++G LKG++   MS  WLAPQF
Sbjct: 417 GISILQRIGIGMVFSVITMIVAALVEKKRLEA----VEMNGPLKGSL--SMSALWLAPQF 470

Query: 183 LINGIGDGFALVGMQEFFYDQVPDTMRSLGIALYFSALGIADF 311
           +I G GDGFALVG+QE+FYDQVPD+MRSLGIALY S +G A F
Sbjct: 471 MIIGFGDGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAASF 513



 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/96 (59%), Positives = 75/96 (78%)
 Frame = +3

Query: 3    GITILQRIGIGMVLSMLSMFIASGIERKRLRVAKRHVTVSGGLKGNVVVPMSIFWLAPQF 182
            GI+ILQRIGIGM  S+++M +A+ +E+KRL      V ++G LKG++    S+FWLAP F
Sbjct: 848  GISILQRIGIGMFFSIITMIVAALVEKKRLEA----VEINGPLKGSLST--SVFWLAPXF 901

Query: 183  LINGIGDGFALVGMQEFFYDQVPDTMRSLGIALYFS 290
            LI   GDGF+LVG+QE+FYDQVPD+MRSLGIA Y+S
Sbjct: 902  LIIEFGDGFSLVGLQEYFYDQVPDSMRSLGIAFYYS 937


>ref|XP_002277582.1| PREDICTED: putative peptide/nitrate transporter At2g37900 [Vitis
           vinifera]
          Length = 593

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/103 (62%), Positives = 78/103 (75%)
 Frame = +3

Query: 3   GITILQRIGIGMVLSMLSMFIASGIERKRLRVAKRHVTVSGGLKGNVVVPMSIFWLAPQF 182
           GI ILQRIG GM+ S+LSM  A+ +ERKRLRVA+  +T  GG  G V   MS+ WLAPQ+
Sbjct: 419 GIKILQRIGFGMIFSVLSMSTAALVERKRLRVAEEELT--GGKTGPV--SMSVLWLAPQY 474

Query: 183 LINGIGDGFALVGMQEFFYDQVPDTMRSLGIALYFSALGIADF 311
           LI G GDGF LVG+QE+FY QVPD+MRSLGIA Y S +G+ +F
Sbjct: 475 LILGFGDGFTLVGLQEYFYGQVPDSMRSLGIAFYLSVIGVGNF 517


>emb|CAN73118.1| hypothetical protein VITISV_002486 [Vitis vinifera]
          Length = 1164

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/103 (62%), Positives = 78/103 (75%)
 Frame = +3

Query: 3   GITILQRIGIGMVLSMLSMFIASGIERKRLRVAKRHVTVSGGLKGNVVVPMSIFWLAPQF 182
           GI ILQRIG GM+ S+LSM  A+ +ERKRLRVA+  +T  GG  G V   MS+ WLAPQ+
Sbjct: 435 GIKILQRIGFGMIFSVLSMSTAALVERKRLRVAEEELT--GGKTGPV--SMSVLWLAPQY 490

Query: 183 LINGIGDGFALVGMQEFFYDQVPDTMRSLGIALYFSALGIADF 311
           LI G GDGF LVG+QE+FY QVPD+MRSLGIA Y S +G+ +F
Sbjct: 491 LILGFGDGFTLVGLQEYFYGQVPDSMRSLGIAFYLSVIGVGNF 533


>ref|XP_003516904.1| PREDICTED: probable peptide/nitrate transporter At3g53960-like
           [Glycine max]
          Length = 594

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/103 (62%), Positives = 79/103 (76%)
 Frame = +3

Query: 3   GITILQRIGIGMVLSMLSMFIASGIERKRLRVAKRHVTVSGGLKGNVVVPMSIFWLAPQF 182
           GI ILQRIGIGM+ S+++M  A+ +E+KRL      V ++G LKG++   MS  WLAPQF
Sbjct: 416 GINILQRIGIGMIFSVITMIAAALVEKKRLEA----VEMNGPLKGSL--SMSALWLAPQF 469

Query: 183 LINGIGDGFALVGMQEFFYDQVPDTMRSLGIALYFSALGIADF 311
           LI G GDGFALVG+QE+FYDQVPD+MRSLGIALY S +G A F
Sbjct: 470 LIIGFGDGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAASF 512