BLASTX nr result

ID: Coptis21_contig00020936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020936
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283575.1| PREDICTED: myb-related protein 306 isoform 1...   441   e-121
ref|XP_002284926.1| PREDICTED: myb-related protein 306 [Vitis vi...   431   e-118
gb|ABK59040.1| R2R3 Myb30 transcription factor [Vitis vinifera]       430   e-118
emb|CBI22219.3| unnamed protein product [Vitis vinifera]              420   e-115
gb|ADL36762.1| MYB domain class transcription factor [Malus x do...   418   e-114

>ref|XP_002283575.1| PREDICTED: myb-related protein 306 isoform 1 [Vitis vinifera]
          Length = 327

 Score =  441 bits (1133), Expect = e-121
 Identities = 232/326 (71%), Positives = 260/326 (79%), Gaps = 5/326 (1%)
 Frame = -1

Query: 1249 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1070
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 1069 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 890
            LRPGIKRGNFTDHEE+MIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEERMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 889  TG--LDGQNRDGLSSFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKAS 716
            TG   DG +RD   + Q+I++GQWERRLQTDIH AK+AL EALSL+ KP+SS    L  +
Sbjct: 121  TGSSSDGHSRDVSLASQSISRGQWERRLQTDIHMAKQALHEALSLE-KPHSSS-DQLNPT 178

Query: 715  NGYYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDS 536
            NGY + TR   P Q+ +YASSTENI+RLLEGWM N+PKQA  +S TTQ SF N  G TDS
Sbjct: 179  NGYQTCTR---PGQASSYASSTENIARLLEGWMRNSPKQARASSATTQNSFINTAG-TDS 234

Query: 535  SSREGTPSAENNNEIVSQGAFDSLF---ALNSSTPDVSPSMSLDDSTENSFFQDESKPNF 365
            +S EGTPSA NN +I    A++ LF   +L+SS  ++S S     S E SFFQ+ESKP+ 
Sbjct: 235  TSSEGTPSAANNEDIELTEAYEMLFGFDSLDSSNSEISQS----KSPEASFFQEESKPDL 290

Query: 364  ETPVPLCVLEKWLFEENILGQSHEDL 287
               VPL  LEKWLFEE    Q  EDL
Sbjct: 291  SDQVPLSFLEKWLFEEG-GAQGKEDL 315


>ref|XP_002284926.1| PREDICTED: myb-related protein 306 [Vitis vinifera]
          Length = 307

 Score =  431 bits (1109), Expect = e-118
 Identities = 223/324 (68%), Positives = 246/324 (75%), Gaps = 2/324 (0%)
 Frame = -1

Query: 1249 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1070
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPT+TGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTSTGLLRCSKSCRLRWTNY 60

Query: 1069 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 890
            LRPGIKRGNFTD EEK IIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+K  
Sbjct: 61   LRPGIKRGNFTDQEEKTIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFP 120

Query: 889  TGLDGQNRDGLSSFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKASNG 710
            TG+D  N+DG S    I+KGQWERRLQTDIH AK+ALCEALS+D    SS L DLK+SNG
Sbjct: 121  TGVDDHNQDGFS----ISKGQWERRLQTDIHMAKQALCEALSID---TSSSLPDLKSSNG 173

Query: 709  YYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDSSS 530
            Y   TR   PVQ+ TYASS ENI++LLEGWM N+PK   TNSE TQ S N+  G T    
Sbjct: 174  YNPNTR---PVQASTYASSAENIAKLLEGWMRNSPKSTRTNSEATQNSKNSSEGAT---- 226

Query: 529  REGTPSAENNNEIVSQGAFDSLFALNSSTPDVSPS--MSLDDSTENSFFQDESKPNFETP 356
               TP            A DSLF+ NSS  D+S S   + + + E   FQDESKPN ET 
Sbjct: 227  ---TPD-----------ALDSLFSFNSSNSDLSLSNDETANFTPETILFQDESKPNLETQ 272

Query: 355  VPLCVLEKWLFEENILGQSHEDLM 284
            VPL ++EKWLF+E    Q  EDL+
Sbjct: 273  VPLTMIEKWLFDEGAATQEQEDLI 296


>gb|ABK59040.1| R2R3 Myb30 transcription factor [Vitis vinifera]
          Length = 307

 Score =  430 bits (1106), Expect = e-118
 Identities = 222/324 (68%), Positives = 246/324 (75%), Gaps = 2/324 (0%)
 Frame = -1

Query: 1249 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1070
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQ+HGPGNWRAVPT+TGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQDHGPGNWRAVPTSTGLLRCSKSCRLRWTNY 60

Query: 1069 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 890
            LRPGIKRGNFTD EEK IIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+K  
Sbjct: 61   LRPGIKRGNFTDQEEKTIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFP 120

Query: 889  TGLDGQNRDGLSSFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKASNG 710
            TG+D  N+DG S    I+KGQWERRLQTDIH AK+ALCEALS+D    SS L DLK+SNG
Sbjct: 121  TGVDDHNQDGFS----ISKGQWERRLQTDIHMAKQALCEALSID---TSSSLPDLKSSNG 173

Query: 709  YYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDSSS 530
            Y   TR   PVQ+ TYASS ENI++LLEGWM N+PK   TNSE TQ S N+  G T    
Sbjct: 174  YNPNTR---PVQASTYASSAENIAKLLEGWMRNSPKSTRTNSEATQNSKNSSEGAT---- 226

Query: 529  REGTPSAENNNEIVSQGAFDSLFALNSSTPDVSPS--MSLDDSTENSFFQDESKPNFETP 356
               TP            A DSLF+ NSS  D+S S   + + + E   FQDESKPN ET 
Sbjct: 227  ---TPD-----------ALDSLFSFNSSNSDLSLSNDETANFTPETILFQDESKPNLETQ 272

Query: 355  VPLCVLEKWLFEENILGQSHEDLM 284
            VPL ++EKWLF+E    Q  EDL+
Sbjct: 273  VPLTMIEKWLFDEGAATQEQEDLI 296


>emb|CBI22219.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  420 bits (1080), Expect = e-115
 Identities = 223/326 (68%), Positives = 249/326 (76%), Gaps = 5/326 (1%)
 Frame = -1

Query: 1249 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1070
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 1069 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 890
            LRPGIKRGNFTDHEE+MIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEERMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 889  TG--LDGQNRDGLSSFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKAS 716
            TG   DG +RD   + Q+I++GQWERRLQTDIH AK+AL EALSL+ KP++S        
Sbjct: 121  TGSSSDGHSRDVSLASQSISRGQWERRLQTDIHMAKQALHEALSLE-KPHTS-------- 171

Query: 715  NGYYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDS 536
                            +YASSTENI+RLLEGWM N+PKQA  +S TTQ SF N  G TDS
Sbjct: 172  ----------------SYASSTENIARLLEGWMRNSPKQARASSATTQNSFINTAG-TDS 214

Query: 535  SSREGTPSAENNNEIVSQGAFDSLF---ALNSSTPDVSPSMSLDDSTENSFFQDESKPNF 365
            +S EGTPSA NN +I    A++ LF   +L+SS  ++S S     S E SFFQ+ESKP+ 
Sbjct: 215  TSSEGTPSAANNEDIELTEAYEMLFGFDSLDSSNSEISQS----KSPEASFFQEESKPDL 270

Query: 364  ETPVPLCVLEKWLFEENILGQSHEDL 287
               VPL  LEKWLFEE    Q  EDL
Sbjct: 271  SDQVPLSFLEKWLFEEG-GAQGKEDL 295


>gb|ADL36762.1| MYB domain class transcription factor [Malus x domestica]
          Length = 374

 Score =  418 bits (1074), Expect = e-114
 Identities = 232/370 (62%), Positives = 264/370 (71%), Gaps = 47/370 (12%)
 Frame = -1

Query: 1249 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1070
            MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWR+VPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 1069 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 890
            LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 889  TGLDG----QNRDGLSSFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPN-------- 746
            TGLDG     ++DG S  Q I+KGQWERRLQTDIH AK+ALCEALS+D KPN        
Sbjct: 121  TGLDGHDHHNHQDGNSHDQPISKGQWERRLQTDIHMAKQALCEALSID-KPNVISTTTVS 179

Query: 745  -SSCLSDLKAS--NGYYSL----TRPIQPVQSGTYASSTENISRLLEGWMANAPKQA--E 593
                L DLK S   G Y++    +   +P  + TYAS+TENI++LLE WM N+PK +  +
Sbjct: 180  HDLHLQDLKPSINIGNYNINDNPSTSTRPHHTSTYASNTENIAKLLENWMKNSPKVSAHQ 239

Query: 592  TNSETTQ----YSFNNVN---------------GTTDSSSREGTPSAENNNEIVSQGAFD 470
            TNS+ T      SFNN N               G + S+S EG  SA    +     AFD
Sbjct: 240  TNSDQTNADQTNSFNNNNNNDNDNKGGATATTRGRSMSTSSEGAHSATTTPD----QAFD 295

Query: 469  SLFALNSSTPDVSPSMSLDDSTEN-------SFFQDESKPNFETPVPLCVLEKWLFEENI 311
            SLF+ NSS  DVS SMS+D++  N         FQDESKPN E  VPL +LEKWL ++  
Sbjct: 296  SLFSFNSSPSDVSQSMSVDENNANFIADQASCLFQDESKPNLEGQVPLSLLEKWLLDD-A 354

Query: 310  LGQSHEDLMH 281
               +HEDL++
Sbjct: 355  APHAHEDLIN 364


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