BLASTX nr result

ID: Coptis21_contig00020919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020919
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...    55   8e-06
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...    55   8e-06

>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
 Frame = +2

Query: 53  ECDHSFLLETDEGYVCQACGI----IKALFDYQREEGSKTTWTYMSEPQS 190
           +C+HSFLL+ D GYVC+ CG+    I+ +F++Q  +G K+T TY+SE ++
Sbjct: 286 DCEHSFLLKDDLGYVCRICGVIDRGIETIFEFQYNKGKKSTRTYISESRN 335


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
 Frame = +2

Query: 53  ECDHSFLLETDEGYVCQACGI----IKALFDYQREEGSKTTWTYMSEPQS 190
           +C+HSFLL+ D GYVC+ CG+    I+ +F++Q  +G K+T TY+SE ++
Sbjct: 286 DCEHSFLLKDDLGYVCRICGVIDRGIETIFEFQYNKGKKSTRTYISESRN 335


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