BLASTX nr result

ID: Coptis21_contig00020913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020913
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19022.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_002285854.1| PREDICTED: uncharacterized protein LOC100260...   138   4e-31
ref|XP_002306636.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002302235.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
gb|ACD56615.1| predicted protein [Gossypioides kirkii]                120   1e-25

>emb|CBI19022.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  138 bits (348), Expect = 4e-31
 Identities = 76/139 (54%), Positives = 94/139 (67%), Gaps = 8/139 (5%)
 Frame = -3

Query: 414 MNQYGEENPFC-YFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKST 238
           MN Y E+NP C YFHPKE +VGVC  CL ERLLILA+KQGH  L K    T++++++K  
Sbjct: 1   MNLYREDNPCCCYFHPKEVIVGVCPLCLNERLLILAAKQGHHSLAKGHHRTHSLMHKKPP 60

Query: 237 LHIPKIFALGSFLHRP--APSKSKDFDQDTSTSQEDSFISIKFEDNGMVSWDKGANTKVS 64
           +++PKIFALGSFL R      KS   D D STSQEDSFISIKFEDNG+ SW+K   TKV 
Sbjct: 61  INLPKIFALGSFLTRLEFRHWKSDHSDHDASTSQEDSFISIKFEDNGVASWEKTTATKVP 120

Query: 63  IG-----PLNKSITHKSSI 22
           +      PL+K +    S+
Sbjct: 121 LQHCTNMPLSKEVKGTKSV 139


>ref|XP_002285854.1| PREDICTED: uncharacterized protein LOC100260772 [Vitis vinifera]
          Length = 200

 Score =  138 bits (348), Expect = 4e-31
 Identities = 76/139 (54%), Positives = 94/139 (67%), Gaps = 8/139 (5%)
 Frame = -3

Query: 414 MNQYGEENPFC-YFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKST 238
           MN Y E+NP C YFHPKE +VGVC  CL ERLLILA+KQGH  L K    T++++++K  
Sbjct: 1   MNLYREDNPCCCYFHPKEVIVGVCPLCLNERLLILAAKQGHHSLAKGHHRTHSLMHKKPP 60

Query: 237 LHIPKIFALGSFLHRP--APSKSKDFDQDTSTSQEDSFISIKFEDNGMVSWDKGANTKVS 64
           +++PKIFALGSFL R      KS   D D STSQEDSFISIKFEDNG+ SW+K   TKV 
Sbjct: 61  INLPKIFALGSFLTRLEFRHWKSDHSDHDASTSQEDSFISIKFEDNGVASWEKTTATKVP 120

Query: 63  IG-----PLNKSITHKSSI 22
           +      PL+K +    S+
Sbjct: 121 LQHCTNMPLSKEVKGTKSV 139


>ref|XP_002306636.1| predicted protein [Populus trichocarpa] gi|222856085|gb|EEE93632.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  127 bits (319), Expect = 9e-28
 Identities = 69/127 (54%), Positives = 86/127 (67%), Gaps = 4/127 (3%)
 Frame = -3

Query: 414 MNQY-GEENPFCYFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKST 238
           MN Y  E+N +CYFHPKE +VGVC  CL ERLLILA+KQG+L   +         ++K  
Sbjct: 1   MNAYRSEDNSYCYFHPKEVVVGVCPLCLSERLLILAAKQGNLSSARAAHRNEGTTHKKPP 60

Query: 237 LHIPKIFALGSFLHRP--APSKSKDFDQDTS-TSQEDSFISIKFEDNGMVSWDKGANTKV 67
           +++PKIFALGSFL+R      KS + D D   TSQEDSFISIKFEDNG  SW+KG  +KV
Sbjct: 61  INLPKIFALGSFLNRLEFRNWKSNNSDHDAEPTSQEDSFISIKFEDNGAASWEKGTVSKV 120

Query: 66  SIGPLNK 46
            I P ++
Sbjct: 121 FIDPCSQ 127


>ref|XP_002302235.1| predicted protein [Populus trichocarpa] gi|222843961|gb|EEE81508.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  125 bits (313), Expect = 5e-27
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 3/122 (2%)
 Frame = -3

Query: 399 EENPFCYFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKSTLHIPKI 220
           E+N +CYFHPKE  VG+C  CL ERLLILA+KQG L   ++T       +RK  +++ KI
Sbjct: 7   EDNSYCYFHPKEVFVGICPLCLNERLLILATKQGSLSAARETHRNEGTAHRKPPINLTKI 66

Query: 219 FALGSFLHR--PAPSKSKDFDQDTS-TSQEDSFISIKFEDNGMVSWDKGANTKVSIGPLN 49
           FA G  L+R      KS + DQD + TSQEDSFISIKFEDNG   W+KG  +KVSI P +
Sbjct: 67  FAFGYLLNRFEFRHGKSDNSDQDAAYTSQEDSFISIKFEDNGAAFWEKGTVSKVSIEPCS 126

Query: 48  KS 43
           KS
Sbjct: 127 KS 128


>gb|ACD56615.1| predicted protein [Gossypioides kirkii]
          Length = 196

 Score =  120 bits (301), Expect = 1e-25
 Identities = 70/145 (48%), Positives = 95/145 (65%), Gaps = 7/145 (4%)
 Frame = -3

Query: 414 MNQYGEENPFCYFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLY----R 247
           M  Y E+N  CYFHPKE ++GVC  CL ERLL LASKQ         +S++ +++    +
Sbjct: 2   MKGYREDNSCCYFHPKEVVIGVCPLCLNERLLFLASKQAQRSSSSTCKSSHRLIHGVAVK 61

Query: 246 KSTLHIPKIFALGSFLHRP--APSKSKDFD-QDTSTSQEDSFISIKFEDNGMVSWDKGAN 76
           K  +++PKIFALGS L+R      KS++ D  D STSQEDSFISIKFE+NG+ SWDKG  
Sbjct: 62  KPPINLPKIFALGSLLNRLEFKHCKSENSDAHDASTSQEDSFISIKFEENGVGSWDKGTV 121

Query: 75  TKVSIGPLNKSITHKSSIGTTKTVV 1
           +KVS+   + S++   S  T K+V+
Sbjct: 122 SKVSLE--HCSMSWNPSKDTKKSVI 144


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