BLASTX nr result

ID: Coptis21_contig00020894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020894
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40185.3| unnamed protein product [Vitis vinifera]              357   9e-97
ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...   355   4e-96
ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-a...   346   2e-93
ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-a...   345   5e-93
ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a...   341   7e-92

>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  357 bits (917), Expect = 9e-97
 Identities = 174/230 (75%), Positives = 201/230 (87%), Gaps = 3/230 (1%)
 Frame = -2

Query: 683 VEKKMGAKNTQV---DDNATNELDLKVKKYLRGDIANFENLKDKKLRGQLASKEELYKKS 513
           VE++ G     V   + + ++ELD+KVKKYLRG+ AN E L+DKKL+GQL  +EELY KS
Sbjct: 3   VEQENGTPTEMVPASEQDISDELDVKVKKYLRGEGANLEALQDKKLKGQLVIREELYGKS 62

Query: 512 ANAAAKTEKWLMPSEPGYLEAEGLEKTWRFRQESIVREVDILSSRKPFDLVLPDLGPYTI 333
           A AAAK EKWLMPSE GYLEAEG+EKTWR +QESI REVDILSS+  +D+VLP+LGPYT+
Sbjct: 63  AKAAAKAEKWLMPSEGGYLEAEGIEKTWRIKQESIAREVDILSSKNQYDIVLPELGPYTL 122

Query: 332 DYASSGRYIAVGGRKGHLALIDMKNLNLIKEFQVRETVRDVVFLHNELFFAVAQKKYPYI 153
           D+ SSGRY+AVGGRKGHLA+IDMKN+ +IK+FQVRETVRDVVFLHNELFFA AQKKYPYI
Sbjct: 123 DFTSSGRYMAVGGRKGHLAIIDMKNMGVIKDFQVRETVRDVVFLHNELFFAAAQKKYPYI 182

Query: 152 YNKDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVG 3
           YN+DGTELHCLKEHG+VLKLQFL+NHFLLASINKFGQLHYQDVT G MVG
Sbjct: 183 YNRDGTELHCLKEHGSVLKLQFLKNHFLLASINKFGQLHYQDVTMGEMVG 232


>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
           [Vitis vinifera]
          Length = 610

 Score =  355 bits (912), Expect = 4e-96
 Identities = 170/211 (80%), Positives = 193/211 (91%)
 Frame = -2

Query: 635 TNELDLKVKKYLRGDIANFENLKDKKLRGQLASKEELYKKSANAAAKTEKWLMPSEPGYL 456
           ++ELD+KVKKYLRG+ AN E L+DKKL+GQL  +EELY KSA AAAK EKWLMPSE GYL
Sbjct: 96  SDELDVKVKKYLRGEGANLEALQDKKLKGQLVIREELYGKSAKAAAKAEKWLMPSEGGYL 155

Query: 455 EAEGLEKTWRFRQESIVREVDILSSRKPFDLVLPDLGPYTIDYASSGRYIAVGGRKGHLA 276
           EAEG+EKTWR +QESI REVDILSS+  +D+VLP+LGPYT+D+ SSGRY+AVGGRKGHLA
Sbjct: 156 EAEGIEKTWRIKQESIAREVDILSSKNQYDIVLPELGPYTLDFTSSGRYMAVGGRKGHLA 215

Query: 275 LIDMKNLNLIKEFQVRETVRDVVFLHNELFFAVAQKKYPYIYNKDGTELHCLKEHGAVLK 96
           +IDMKN+ +IK+FQVRETVRDVVFLHNELFFA AQKKYPYIYN+DGTELHCLKEHG+VLK
Sbjct: 216 IIDMKNMGVIKDFQVRETVRDVVFLHNELFFAAAQKKYPYIYNRDGTELHCLKEHGSVLK 275

Query: 95  LQFLRNHFLLASINKFGQLHYQDVTHGGMVG 3
           LQFL+NHFLLASINKFGQLHYQDVT G MVG
Sbjct: 276 LQFLKNHFLLASINKFGQLHYQDVTMGEMVG 306


>ref|XP_003536295.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  346 bits (888), Expect = 2e-93
 Identities = 164/215 (76%), Positives = 190/215 (88%)
 Frame = -2

Query: 647 DDNATNELDLKVKKYLRGDIANFENLKDKKLRGQLASKEELYKKSANAAAKTEKWLMPSE 468
           + + T+ELDL++KKYLRG+ AN E LKDKKL+GQLA+KE+LY KSA AAAK EKWLMPSE
Sbjct: 18  EQDVTDELDLRMKKYLRGEGANLEGLKDKKLKGQLAAKEDLYGKSAKAAAKAEKWLMPSE 77

Query: 467 PGYLEAEGLEKTWRFRQESIVREVDILSSRKPFDLVLPDLGPYTIDYASSGRYIAVGGRK 288
            GYLEAEGLEKTWR +QE+I  EVDI SSRK +D++LP+LGPYT+D+ SSGRY+AV GRK
Sbjct: 78  GGYLEAEGLEKTWRIKQEAIAHEVDISSSRKQYDIILPELGPYTLDFTSSGRYMAVSGRK 137

Query: 287 GHLALIDMKNLNLIKEFQVRETVRDVVFLHNELFFAVAQKKYPYIYNKDGTELHCLKEHG 108
           GHL ++DM NL++I+EFQVRETVRDV FLHNELFFA AQKKYPYIYN++GTELHCLKEHG
Sbjct: 138 GHLGIVDMINLSIIREFQVRETVRDVAFLHNELFFAAAQKKYPYIYNREGTELHCLKEHG 197

Query: 107 AVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVG 3
            VL+LQFL NHFLLASINKFGQL YQDVT G MVG
Sbjct: 198 PVLRLQFLENHFLLASINKFGQLRYQDVTMGSMVG 232


>ref|XP_003556293.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Glycine max]
          Length = 535

 Score =  345 bits (885), Expect = 5e-93
 Identities = 165/225 (73%), Positives = 190/225 (84%)
 Frame = -2

Query: 677 KKMGAKNTQVDDNATNELDLKVKKYLRGDIANFENLKDKKLRGQLASKEELYKKSANAAA 498
           K +       + + T+ELDL++KKYLRG+ AN E LKDKKL+GQLA KE+LY KSA AAA
Sbjct: 8   KALAKSKPSTEQDVTDELDLRMKKYLRGEGANLEGLKDKKLKGQLAVKEDLYGKSAKAAA 67

Query: 497 KTEKWLMPSEPGYLEAEGLEKTWRFRQESIVREVDILSSRKPFDLVLPDLGPYTIDYASS 318
           K EKWLMPSE GYLEAEGLEKTWR +QE+I REVDI SS K +D++LP+LGPYT+D+ SS
Sbjct: 68  KAEKWLMPSEGGYLEAEGLEKTWRIKQEAIAREVDISSSGKQYDIILPELGPYTLDFTSS 127

Query: 317 GRYIAVGGRKGHLALIDMKNLNLIKEFQVRETVRDVVFLHNELFFAVAQKKYPYIYNKDG 138
           GRY+AV GRKGHL ++DM NL+LI+EFQVRETVRDV FLHNELFF  AQKKYPYIYN++G
Sbjct: 128 GRYMAVSGRKGHLGIVDMINLSLIREFQVRETVRDVAFLHNELFFVAAQKKYPYIYNREG 187

Query: 137 TELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVG 3
           TELHCLKEHG VL+LQFL NHFLLASINKFGQL YQDVT G MVG
Sbjct: 188 TELHCLKEHGPVLRLQFLENHFLLASINKFGQLRYQDVTMGSMVG 232


>ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Cucumis sativus]
           gi|449528879|ref|XP_004171429.1| PREDICTED: probable U3
           small nucleolar RNA-associated protein 7-like [Cucumis
           sativus]
          Length = 536

 Score =  341 bits (875), Expect = 7e-92
 Identities = 165/232 (71%), Positives = 196/232 (84%), Gaps = 5/232 (2%)
 Frame = -2

Query: 683 VEKKMGAKNTQ-----VDDNATNELDLKVKKYLRGDIANFENLKDKKLRGQLASKEELYK 519
           +EK++G   T+      +   +NE+D+KVKKY+RG+ AN E LKDKKL+GQL++ E+LY 
Sbjct: 1   MEKELGNVVTERILPPTEQEVSNEIDVKVKKYMRGEGANLEVLKDKKLKGQLSAIEDLYG 60

Query: 518 KSANAAAKTEKWLMPSEPGYLEAEGLEKTWRFRQESIVREVDILSSRKPFDLVLPDLGPY 339
           KSA AAA+ EKWLMPSE GYLE EGLEKTWR +QE+I  EVDILS R   D++LP LGPY
Sbjct: 61  KSAKAAAEVEKWLMPSEGGYLETEGLEKTWRIKQETISHEVDILSRRNQHDIILPALGPY 120

Query: 338 TIDYASSGRYIAVGGRKGHLALIDMKNLNLIKEFQVRETVRDVVFLHNELFFAVAQKKYP 159
           +IDY S+GRY+A+ GRKGHLAL+DMK+LNLIKEFQV+ETVRDVVFLHNELFFA AQKKYP
Sbjct: 121 SIDYTSNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP 180

Query: 158 YIYNKDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLHYQDVTHGGMVG 3
           YIYN++GTELHCLKEHG+V +LQFL+NHFLL SINKFGQLHYQDVT G MVG
Sbjct: 181 YIYNREGTELHCLKEHGSVRRLQFLKNHFLLVSINKFGQLHYQDVTTGSMVG 232


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