BLASTX nr result

ID: Coptis21_contig00020892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020892
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   219   5e-55
ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   215   9e-54
ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   193   4e-47
ref|XP_004134357.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   193   4e-47
ref|XP_004160699.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   184   2e-44

>ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 413

 Score =  219 bits (558), Expect = 5e-55
 Identities = 103/149 (69%), Positives = 129/149 (86%)
 Frame = -1

Query: 745 KENRLKAIEAGAMCVLIELLVDSTKSKCERMLLIIKLLCECAEGRLAIVDHSLGIVAISK 566
           K +RLK IEAGA+C+LIELL DS +SKCE+MLL++KLLCECAEGRLA+V+H LGI AISK
Sbjct: 264 KTSRLKVIEAGAVCILIELLPDSNRSKCEKMLLLLKLLCECAEGRLALVEHGLGIAAISK 323

Query: 565 KILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGSVKKLLCLLHIDGRSSTKDKAMK 386
           K+L VS  ATK+ +KI+WLI ++HP+E+VLEE+L+ GSVKKLL LLHID RSSTK+K +K
Sbjct: 324 KLLHVSSAATKITVKILWLICSYHPSERVLEELLIFGSVKKLLALLHIDNRSSTKEKVVK 383

Query: 385 IIKLHGDKWRKYPCFPNELRDYLGLMHDS 299
           I KLHG+ WR+ PCFP EL+D+LGLM+ S
Sbjct: 384 IFKLHGNSWRQNPCFPCELKDHLGLMNGS 412


>ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 411

 Score =  215 bits (547), Expect = 9e-54
 Identities = 101/149 (67%), Positives = 128/149 (85%)
 Frame = -1

Query: 745 KENRLKAIEAGAMCVLIELLVDSTKSKCERMLLIIKLLCECAEGRLAIVDHSLGIVAISK 566
           K++RLKAIEAGA+C+LIELL DS +SKCE+MLL++KLLCECAEGRLA+V+H LGI AISK
Sbjct: 262 KKSRLKAIEAGAVCILIELLPDSNRSKCEKMLLLLKLLCECAEGRLALVEHGLGIAAISK 321

Query: 565 KILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGSVKKLLCLLHIDGRSSTKDKAMK 386
           K+L VS  +TK+ +KI+WLI ++HP+E+VLEEML+ GSVKKLL LLHI  RSSTK+K +K
Sbjct: 322 KLLHVSSASTKITVKILWLICSYHPSERVLEEMLILGSVKKLLVLLHIGNRSSTKEKVVK 381

Query: 385 IIKLHGDKWRKYPCFPNELRDYLGLMHDS 299
           I +LH + WR+YPCFP EL+DY GL + S
Sbjct: 382 IFRLHRNSWRQYPCFPWELKDYSGLTNQS 410


>ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 365

 Score =  193 bits (490), Expect = 4e-47
 Identities = 91/155 (58%), Positives = 128/155 (82%), Gaps = 7/155 (4%)
 Frame = -1

Query: 745 KENRLKAIEAGAMCVLIELLVDSTKSKCERMLLIIKLLCECAEGRLAIVDHSLGIVAISK 566
           K +R+KAIEAGA+ +LIELL +S +SKCERML I++ LCECAEGRLA+V+H +GI A++K
Sbjct: 210 KRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCECAEGRLALVEHGMGIAAVTK 269

Query: 565 KILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGSVKKLLCLLHID-------GRSS 407
           KIL VS +ATK+G+KI+  I++FHP E+V++EM+  G+VKKLL +LH+D       GRSS
Sbjct: 270 KILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKKLLMILHMDSAGVGDGGRSS 329

Query: 406 TKDKAMKIIKLHGDKWRKYPCFPNELRDYLGLMHD 302
           TK+K +KI+K+HG+KWR+ PCFP+EL++YL  ++D
Sbjct: 330 TKEKVIKILKMHGNKWRRSPCFPSELKNYLKFVND 364


>ref|XP_004134357.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 415

 Score =  193 bits (490), Expect = 4e-47
 Identities = 91/155 (58%), Positives = 128/155 (82%), Gaps = 7/155 (4%)
 Frame = -1

Query: 745 KENRLKAIEAGAMCVLIELLVDSTKSKCERMLLIIKLLCECAEGRLAIVDHSLGIVAISK 566
           K +R+KAIEAGA+ +LIELL +S +SKCERML I++ LCECAEGRLA+V+H +GI A++K
Sbjct: 260 KRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCECAEGRLALVEHGMGIAAVTK 319

Query: 565 KILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGSVKKLLCLLHID-------GRSS 407
           KIL VS +ATK+G+KI+  I++FHP E+V++EM+  G+VKKLL +LH+D       GRSS
Sbjct: 320 KILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKKLLMILHMDSTGVGDGGRSS 379

Query: 406 TKDKAMKIIKLHGDKWRKYPCFPNELRDYLGLMHD 302
           TK+K +KI+K+HG+KWR+ PCFP+EL++YL  ++D
Sbjct: 380 TKEKVIKILKMHGNKWRRSPCFPSELKNYLKFVND 414


>ref|XP_004160699.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 152

 Score =  184 bits (467), Expect = 2e-44
 Identities = 89/148 (60%), Positives = 123/148 (83%), Gaps = 1/148 (0%)
 Frame = -1

Query: 745 KENRLKAIEAGAMCVLIELLVDSTKSKCERMLLIIKLLCECAEGRLAIVDHSLGIVAISK 566
           K++RL +IEAGA+CV+I+LL DS +SKCE++L I+KLL ECAEGR A+ +H +GI  ++K
Sbjct: 5   KKSRLLSIEAGAVCVMIDLLPDSNRSKCEKILHILKLLSECAEGRSAMGEHIMGIATVTK 64

Query: 565 KILRVSELATKLGIKIIWLITNFHPTEKVLEEMLMSGSVKKLLCLLHI-DGRSSTKDKAM 389
           K + +S  ATK+G+KI+WLI N+HP+E+VLEEM+  G+VKKLL +L+  DGRSSTK+KAM
Sbjct: 65  K-MSISNTATKIGMKILWLICNYHPSERVLEEMMGCGTVKKLLGILNNGDGRSSTKEKAM 123

Query: 388 KIIKLHGDKWRKYPCFPNELRDYLGLMH 305
           K++KLHG  WR++PCFP E RDYL L++
Sbjct: 124 KVMKLHGSFWRRFPCFPYEYRDYLKLIN 151


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