BLASTX nr result

ID: Coptis21_contig00020884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020884
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168994.1| PREDICTED: DUF246 domain-containing protein ...    83   3e-14
emb|CBI16922.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002281879.1| PREDICTED: DUF246 domain-containing protein ...    82   6e-14
ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12

>ref|XP_004168994.1| PREDICTED: DUF246 domain-containing protein At1g04910-like, partial
           [Cucumis sativus]
          Length = 638

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 57/132 (43%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
 Frame = +1

Query: 163 MSSKSMMKWVAIVGLTLYAVFLFAHFLLFN-TGESIALHQTSIT---------------- 291
           M  KS MKWV +VG+ L A  LF HF L   T +SI+  Q+SIT                
Sbjct: 7   MVFKSRMKWVGLVGIVLSAFSLFTHFFLARFTQDSISEFQSSITIFSWRPVFEHADFSPT 66

Query: 292 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDA 456
             L+RR   P R      P A     Y    LQ+N +IFVRIQ   HE+ N ICD  V A
Sbjct: 67  SPLFRRLWGPVRRLETLHPDANPRQHYPDPSLQSNGFIFVRIQGGFHEIRNSICDVVVIA 126

Query: 457 GLLNAILVIPEI 492
            LLNA LV+PEI
Sbjct: 127 RLLNATLVVPEI 138


>emb|CBI16922.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 57/132 (43%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
 Frame = +1

Query: 163 MSSKSMMKWVAIVGLTLYAVFLFAHFLLFN-TGESIALHQTSIT---------------- 291
           M  KS MKWV +VGL L A  +F H LL   T + I+ +Q+S+T                
Sbjct: 7   MVFKSKMKWVGLVGLVLSAFSIFIHLLLARYTEDGISDYQSSVTIFSWRPIFENADLPRT 66

Query: 292 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDA 456
             L+R+F  P R      P A   G Y A  LQ N YIFVRIQ   HE+ N I D  V +
Sbjct: 67  SPLHRKFWGPVRRFEPLNPDANPRGYYAAPPLQTNGYIFVRIQGGFHEIRNSISDVVVVS 126

Query: 457 GLLNAILVIPEI 492
            LLNA LVIPEI
Sbjct: 127 RLLNATLVIPEI 138


>ref|XP_002281879.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera]
          Length = 681

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 57/132 (43%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
 Frame = +1

Query: 163 MSSKSMMKWVAIVGLTLYAVFLFAHFLLFN-TGESIALHQTSIT---------------- 291
           M  KS MKWV +VGL L A  +F H LL   T + I+ +Q+S+T                
Sbjct: 7   MVFKSKMKWVGLVGLVLSAFSIFIHLLLARYTEDGISDYQSSVTIFSWRPIFENADLPRT 66

Query: 292 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDA 456
             L+R+F  P R      P A   G Y A  LQ N YIFVRIQ   HE+ N I D  V +
Sbjct: 67  SPLHRKFWGPVRRFEPLNPDANPRGYYAAPPLQTNGYIFVRIQGGFHEIRNSISDVVVVS 126

Query: 457 GLLNAILVIPEI 492
            LLNA LVIPEI
Sbjct: 127 RLLNATLVIPEI 138


>ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|222873687|gb|EEF10818.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 56/132 (42%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
 Frame = +1

Query: 163 MSSKSMMKWVAIVGLTLYAVFLFAHFLLFN-TGESIALHQTSIT---------------- 291
           M  KS MKWV +VGL L A  LF HFLL   T E I  +Q+S+T                
Sbjct: 7   MMIKSKMKWVGLVGLVLSAFSLFVHFLLARFTEEGITDYQSSVTIFSWRPVFENPDFAKN 66

Query: 292 GSLYRRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDA 456
              YRR   P R      P A   G Y     +++ Y+FVRIQ   HE+ N ICD  V +
Sbjct: 67  SPSYRRLWGPVRRLESLHPDANPRGYYTDPRSESSGYVFVRIQGGFHEIRNSICDVVVIS 126

Query: 457 GLLNAILVIPEI 492
            LLNA LVIPEI
Sbjct: 127 RLLNATLVIPEI 138


>ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|222873128|gb|EEF10259.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 53/128 (41%), Positives = 64/128 (50%), Gaps = 22/128 (17%)
 Frame = +1

Query: 175 SMMKWVAIVGLTLYAVFLFAHFLLFN-TGESIALHQTSIT----------------GSLY 303
           S MKWV +VGL L A  LF HFLL   T E I+ +Q+S+T                  LY
Sbjct: 11  SKMKWVGLVGLVLSAFSLFVHFLLARYTEEGISDYQSSVTIFSWRPIFENSDFAKNSPLY 70

Query: 304 RRFCSPERL-----PYAEHTGEYEATGLQNNSYIFVRIQERIHEMTNLICDFAVDAGLLN 468
           RR     R      P A   G Y     +++ Y+FVRIQ   HE+ N ICD    + LLN
Sbjct: 71  RRLWGQVRRLESLHPDANPRGYYADPRSESSGYVFVRIQGGFHEIRNSICDVVAISRLLN 130

Query: 469 AILVIPEI 492
           A LVIPEI
Sbjct: 131 ATLVIPEI 138


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