BLASTX nr result

ID: Coptis21_contig00020869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020869
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314666.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera]    85   7e-15
emb|CBI26300.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis ...    83   3e-14
ref|XP_003638200.1| Vacuolar protein sorting-associated protein-...    82   7e-14

>ref|XP_002314666.1| predicted protein [Populus trichocarpa] gi|222863706|gb|EEF00837.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
 Frame = -3

Query: 352 MGKAGKWIKNFLTGKKEKGKGGSVRNQHCSYSAEFPTVPVA--PTTPKEKRRWSFRRS-- 185
           MGK GKW+++FLTGKK+K K     NQ+ + S E P  P++  PTT KEKRRWSFRRS  
Sbjct: 1   MGKPGKWLRSFLTGKKDKEKEKGTSNQNSTPSIENPVTPISIPPTTAKEKRRWSFRRSSA 60

Query: 184 -ATASRDFSSMDLIATTLQSAVQSMLETENDRRL 86
            A A +D +  +  ATT  +AVQ   ++EN++++
Sbjct: 61  TAAAPKDSNYTEPTATTQPAAVQDTFDSENEQKM 94


>emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera]
          Length = 570

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
 Frame = -3

Query: 352 MGKAGKWIKNFLTGKKEKGKGGSVRNQHC-SYSAEFPTVPVA--PTTPKEKRRWSFRRSA 182
           MGK GKWI+NFLTGKK+K +      +   S + E P+ P+   PTTPKEKRRWSFRRS+
Sbjct: 1   MGKTGKWIRNFLTGKKDKERDREKDKEKLNSIAIENPSTPILIPPTTPKEKRRWSFRRSS 60

Query: 181 TAS---RDFSSMDLIATTLQSAVQSMLETENDRRLXXXXXXXXXXXSCNDAVMAAGQPAP 11
             S   +D  SMD IATT   A Q++L++EN+++            +   AV AA Q A 
Sbjct: 61  ATSAGHKDSISMDTIATT-PPAGQTILDSENEQKKHAMAVAAATAAAAGAAV-AAAQAAA 118

Query: 10  AV 5
           AV
Sbjct: 119 AV 120


>emb|CBI26300.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/122 (45%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
 Frame = -3

Query: 352 MGKAGKWIKNFLTGKKEKGKGGSVRNQHC-SYSAEFPTVPVA--PTTPKEKRRWSFRRSA 182
           MGK GKWI+NFLTGKK+K +      +   S + E P+ P+   PTTPKEKRRWSFRRS+
Sbjct: 1   MGKTGKWIRNFLTGKKDKERDREKDKEKLNSIAIENPSTPILIPPTTPKEKRRWSFRRSS 60

Query: 181 TAS---RDFSSMDLIATTLQSAVQSMLETENDRRLXXXXXXXXXXXSCNDAVMAAGQPAP 11
             S   +D  S+D IATT   A Q +L++EN+++            +   AV AA Q A 
Sbjct: 61  ATSAGHKDSISVDTIATT-PPAGQPILDSENEQKKHAMAVAAATAAAAGAAV-AAAQAAA 118

Query: 10  AV 5
           AV
Sbjct: 119 AV 120


>ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera]
          Length = 464

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/122 (45%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
 Frame = -3

Query: 352 MGKAGKWIKNFLTGKKEKGKGGSVRNQHC-SYSAEFPTVPVA--PTTPKEKRRWSFRRSA 182
           MGK GKWI+NFLTGKK+K +      +   S + E P+ P+   PTTPKEKRRWSFRRS+
Sbjct: 1   MGKTGKWIRNFLTGKKDKERDREKDKEKLNSIAIENPSTPILIPPTTPKEKRRWSFRRSS 60

Query: 181 TAS---RDFSSMDLIATTLQSAVQSMLETENDRRLXXXXXXXXXXXSCNDAVMAAGQPAP 11
             S   +D  S+D IATT   A Q +L++EN+++            +   AV AA Q A 
Sbjct: 61  ATSAGHKDSISVDTIATT-PPAGQPILDSENEQKKHAMAVAAATAAAAGAAV-AAAQAAA 118

Query: 10  AV 5
           AV
Sbjct: 119 AV 120


>ref|XP_003638200.1| Vacuolar protein sorting-associated protein-like protein [Medicago
           truncatula] gi|355504135|gb|AES85338.1| Vacuolar protein
           sorting-associated protein-like protein [Medicago
           truncatula]
          Length = 539

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
 Frame = -3

Query: 352 MGKAGKWIKNFLTGKK--EKGKGGSVRNQHCSYSAEFPTVPVAPTTPKEKRRWSFRRSA- 182
           MGK GKW+KNFLTGKK  EK K     NQ+ S   E PT PV+ T  KEK+RWSFRRS+ 
Sbjct: 1   MGKKGKWLKNFLTGKKDKEKEKEKCNTNQNFSNGTENPTTPVSTTPSKEKKRWSFRRSSA 60

Query: 181 ----TASRDFSSMDLIAT-TLQSAVQSMLETENDRRLXXXXXXXXXXXSCNDAVMAAGQP 17
               TAS++ ++ ++ A+ T+QS V   ++ +N++R            +  DA +AA Q 
Sbjct: 61  TATPTASKELNNSEITASMTVQSTV---IDIQNEQR-NHAIAVAAATAAAADAAVAAAQA 116

Query: 16  APAV 5
           A AV
Sbjct: 117 AAAV 120


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