BLASTX nr result

ID: Coptis21_contig00020850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020850
         (1436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   501   e-139
ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   494   e-137
ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820...   491   e-136
emb|CBI39443.3| unnamed protein product [Vitis vinifera]              491   e-136
ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycin...   487   e-135

>ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
            [Cucumis sativus] gi|449521697|ref|XP_004167866.1|
            PREDICTED: 15-cis-zeta-carotene isomerase,
            chloroplastic-like [Cucumis sativus]
          Length = 372

 Score =  501 bits (1290), Expect = e-139
 Identities = 241/316 (76%), Positives = 281/316 (88%), Gaps = 2/316 (0%)
 Frame = +3

Query: 336  RILARTSLEETE--GKSSVVVDEFQLGEDSAFFDIFQQKVSSWLYFTGILGVVLFALDAL 509
            R++A  S+ + E  G +SV  DE  +GED+A FD+ +QK++SW+YFT ILGVVLF L+ +
Sbjct: 58   RLVAEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVV 117

Query: 510  WIDSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYR 689
            WID+S G G GKAF+D++SGISDSHE+VML+L+FIFA VHSG+ASLRD GEKL+G RA+R
Sbjct: 118  WIDNSAG-GVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFR 176

Query: 690  VLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEFFWISNFISFLFLYPSTFNLL 869
            VLFAG+SLPLAVSTVVYFINHRYDGVQLWQLQSVP LH+  W+S+F+SF+FLYPSTFNLL
Sbjct: 177  VLFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLL 236

Query: 870  EVAAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGV 1049
            EVAAVD+PKMHLWETGI+RITRHPQMVGQVIWCLAH +WIGNSVAVAAS GLIGHHLFGV
Sbjct: 237  EVAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGV 296

Query: 1050 WNGDRRLGLRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGA 1229
            WNGDRRL  RYG  FE VKSRTS++PFAAI+DGRQKLP DYYKEFLRLPYL+ITA+T+GA
Sbjct: 297  WNGDRRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGA 356

Query: 1230 YWAHPLMQAASYGLHW 1277
            Y AHPLMQAAS+ LHW
Sbjct: 357  YLAHPLMQAASFRLHW 372


>ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Vitis
            vinifera]
          Length = 365

 Score =  494 bits (1271), Expect = e-137
 Identities = 240/318 (75%), Positives = 274/318 (86%)
 Frame = +3

Query: 324  RVLSRILARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWLYFTGILGVVLFALD 503
            R   +I+A TS+ ETE +    V+   +GEDSA FD+ QQK+SSW+YF GILGVVLF LD
Sbjct: 53   RFCHKIMAGTSIGETEEEG---VEPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLD 109

Query: 504  ALWIDSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARA 683
             +WID+S GFG  K FI +++G+S+SHE+VMLIL  IFA  HSG+ASLRD GEKLIG RA
Sbjct: 110  VVWIDNSTGFG--KDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERA 167

Query: 684  YRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEFFWISNFISFLFLYPSTFN 863
            +RVLFAG SLPLAVSTVVYFINHRYDG+QLWQLQSVP +H+  W S+F+SF FLYPSTFN
Sbjct: 168  FRVLFAGTSLPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFN 227

Query: 864  LLEVAAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLF 1043
            LLEVAAVD+PKMHLWETGIMRITRHPQMVGQVIWC+AH +WIGNSVAVAAS GLIGHHLF
Sbjct: 228  LLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLF 287

Query: 1044 GVWNGDRRLGLRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTL 1223
            GVWNGDRRL  RYGEAF+ V+ RTS++PFAAILDGRQKLPKDYYKEFLRLPYL+IT +TL
Sbjct: 288  GVWNGDRRLASRYGEAFDTVQRRTSIIPFAAILDGRQKLPKDYYKEFLRLPYLSITMLTL 347

Query: 1224 GAYWAHPLMQAASYGLHW 1277
            GAY AHPLMQAAS+ LHW
Sbjct: 348  GAYLAHPLMQAASFRLHW 365


>ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820507 [Glycine max]
          Length = 374

 Score =  491 bits (1264), Expect = e-136
 Identities = 235/314 (74%), Positives = 272/314 (86%)
 Frame = +3

Query: 336  RILARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWLYFTGILGVVLFALDALWI 515
            + +ARTS+ E E +S    D   +GEDSA F++ +QK+SSW+YFT ILGVVL  L+  WI
Sbjct: 63   KFVARTSIGENESESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWI 122

Query: 516  DSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVL 695
            D+S G+G  KAFID++S +SDSHE+VMLIL+ IFA VHSG+AS R+ GEKLIG R +RV+
Sbjct: 123  DNSTGYG--KAFIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVI 180

Query: 696  FAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEFFWISNFISFLFLYPSTFNLLEV 875
            FAGISLPLAVSTVVYFINHRYDG+QLW LQ  P LH+  W+SNFISF FLYPSTFNLLEV
Sbjct: 181  FAGISLPLAVSTVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEV 240

Query: 876  AAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWN 1055
            AAVD+PK+HLWETGI+RITRHPQMVGQVIWCLAH +WIGNSVAVAAS GLI HHLFGVWN
Sbjct: 241  AAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWN 300

Query: 1056 GDRRLGLRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYW 1235
            GDRRL +RYGE FE+VKSRTSVVPFAAILDGRQKLPKD+YKEF+RLPYLT+TA+TLGAY+
Sbjct: 301  GDRRLAIRYGEDFELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYF 360

Query: 1236 AHPLMQAASYGLHW 1277
            AHPLMQ AS+ LHW
Sbjct: 361  AHPLMQTASFNLHW 374


>emb|CBI39443.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  491 bits (1263), Expect = e-136
 Identities = 238/312 (76%), Positives = 271/312 (86%)
 Frame = +3

Query: 342  LARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWLYFTGILGVVLFALDALWIDS 521
            +A TS+ ETE +    V+   +GEDSA FD+ QQK+SSW+YF GILGVVLF LD +WID+
Sbjct: 1    MAGTSIGETEEEG---VEPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLDVVWIDN 57

Query: 522  SFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVLFA 701
            S GFG  K FI +++G+S+SHE+VMLIL  IFA  HSG+ASLRD GEKLIG RA+RVLFA
Sbjct: 58   STGFG--KDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERAFRVLFA 115

Query: 702  GISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEFFWISNFISFLFLYPSTFNLLEVAA 881
            G SLPLAVSTVVYFINHRYDG+QLWQLQSVP +H+  W S+F+SF FLYPSTFNLLEVAA
Sbjct: 116  GTSLPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFNLLEVAA 175

Query: 882  VDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWNGD 1061
            VD+PKMHLWETGIMRITRHPQMVGQVIWC+AH +WIGNSVAVAAS GLIGHHLFGVWNGD
Sbjct: 176  VDKPKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLFGVWNGD 235

Query: 1062 RRLGLRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYWAH 1241
            RRL  RYGEAF+ V+ RTS++PFAAILDGRQKLPKDYYKEFLRLPYL+IT +TLGAY AH
Sbjct: 236  RRLASRYGEAFDTVQRRTSIIPFAAILDGRQKLPKDYYKEFLRLPYLSITMLTLGAYLAH 295

Query: 1242 PLMQAASYGLHW 1277
            PLMQAAS+ LHW
Sbjct: 296  PLMQAASFRLHW 307


>ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycine max]
            gi|255639319|gb|ACU19957.1| unknown [Glycine max]
          Length = 369

 Score =  487 bits (1254), Expect = e-135
 Identities = 234/314 (74%), Positives = 273/314 (86%)
 Frame = +3

Query: 336  RILARTSLEETEGKSSVVVDEFQLGEDSAFFDIFQQKVSSWLYFTGILGVVLFALDALWI 515
            + +ARTS+ E E +S   +    +GEDSA F++ +QKVSSW+YFT ILGVVL+ L+  WI
Sbjct: 60   KFVARTSIGENESESEKELGF--VGEDSAVFELGKQKVSSWIYFTAILGVVLYVLNVAWI 117

Query: 516  DSSFGFGWGKAFIDSLSGISDSHEIVMLILVFIFAAVHSGMASLRDPGEKLIGARAYRVL 695
            D+S G+G  KAFID++S +SDS E+VMLIL+ IFA VHSG+AS R+ GEKLIG R +RVL
Sbjct: 118  DNSTGYG--KAFIDAVSTLSDSSEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVL 175

Query: 696  FAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPWLHEFFWISNFISFLFLYPSTFNLLEV 875
            FAGISLPLAVSTVVYFINHRYDG+QLWQLQ  P LH+  W+SNFISF FLYPSTFNLLEV
Sbjct: 176  FAGISLPLAVSTVVYFINHRYDGLQLWQLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEV 235

Query: 876  AAVDEPKMHLWETGIMRITRHPQMVGQVIWCLAHAMWIGNSVAVAASFGLIGHHLFGVWN 1055
            AAVD+PK+HLWETGI+RITRHPQMVGQVIWCLAH +WIGNSVAVAAS GLI HHLFGVWN
Sbjct: 236  AAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWN 295

Query: 1056 GDRRLGLRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYW 1235
            GDRRL +RYGE FE+V+SRTSVVPFAAILDGRQ+LPKD+YKEF+RLPYLT+T +TLGAY+
Sbjct: 296  GDRRLAIRYGEDFELVRSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTVITLGAYF 355

Query: 1236 AHPLMQAASYGLHW 1277
            AHPLMQAAS+ LHW
Sbjct: 356  AHPLMQAASFNLHW 369


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