BLASTX nr result

ID: Coptis21_contig00020846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020846
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002972178.1| ATP-binding cassette transporter [Selaginell...   154   9e-36
ref|XP_002977486.1| ATP-binding cassette transporter [Selaginell...   154   9e-36
ref|XP_002977484.1| ATP-binding cassette transporter [Selaginell...   154   9e-36
ref|XP_002972164.1| ATP-binding cassette transporter [Selaginell...   153   1e-35
ref|XP_002972170.1| ATP-binding cassette transporter [Selaginell...   153   2e-35

>ref|XP_002972178.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300160477|gb|EFJ27095.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1700

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/119 (60%), Positives = 92/119 (77%)
 Frame = -2

Query: 359 VTSRKDQEQYWRDKKQPYQYIPVDEFSQAFLSFYAGRNLYSALFTPYNKSKCHPAALVKR 180
           VTSRKDQEQYW DK+ PY++IPV EF+ AF  F+ G+N+   L  P++KSK HPAALV +
Sbjct: 398 VTSRKDQEQYWADKRMPYRFIPVQEFADAFQKFHVGQNIAEELARPFDKSKSHPAALVTQ 457

Query: 179 KYGLPKKELFKACLDREILLMKRSAFIYIFKAIQIAMVATITATVFLRTEMNHNSPQDG 3
           KY L   ELFKA L REILLMKR++F+Y+FK+ Q+ ++A IT TVFLRTEM+H +  DG
Sbjct: 458 KYALSNWELFKALLAREILLMKRNSFVYVFKSCQLIVIAVITMTVFLRTEMHHRTVGDG 516


>ref|XP_002977486.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300154856|gb|EFJ21490.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1389

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/119 (60%), Positives = 92/119 (77%)
 Frame = -2

Query: 359 VTSRKDQEQYWRDKKQPYQYIPVDEFSQAFLSFYAGRNLYSALFTPYNKSKCHPAALVKR 180
           VTSRKDQEQYW DK+ PY++IPV EF+ AF  F+ G+N+   L  P++KSK HPAALV +
Sbjct: 378 VTSRKDQEQYWADKRMPYRFIPVQEFADAFQKFHVGQNIAEELARPFDKSKSHPAALVTQ 437

Query: 179 KYGLPKKELFKACLDREILLMKRSAFIYIFKAIQIAMVATITATVFLRTEMNHNSPQDG 3
           KY L   ELFKA L REILLMKR++F+Y+FK+ Q+ ++A IT TVFLRTEM+H +  DG
Sbjct: 438 KYALSNWELFKALLAREILLMKRNSFVYVFKSCQLIVIAVITMTVFLRTEMHHRTVGDG 496


>ref|XP_002977484.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300154854|gb|EFJ21488.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1725

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/119 (60%), Positives = 92/119 (77%)
 Frame = -2

Query: 359 VTSRKDQEQYWRDKKQPYQYIPVDEFSQAFLSFYAGRNLYSALFTPYNKSKCHPAALVKR 180
           VTSRKDQEQYW DK+ PY++IPV EF+ AF  F+ G+N+   L  P++KSK HPAALV +
Sbjct: 435 VTSRKDQEQYWADKRMPYRFIPVQEFADAFQKFHVGQNIAEELARPFDKSKSHPAALVTQ 494

Query: 179 KYGLPKKELFKACLDREILLMKRSAFIYIFKAIQIAMVATITATVFLRTEMNHNSPQDG 3
           KY L   ELFKA L REILLMKR++F+Y+FK+ Q+ ++A IT TVFLRTEM+H +  DG
Sbjct: 495 KYALSNWELFKALLAREILLMKRNSFVYVFKSCQLIVIAVITMTVFLRTEMHHRTVGDG 553


>ref|XP_002972164.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300160463|gb|EFJ27081.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1446

 Score =  153 bits (387), Expect = 1e-35
 Identities = 72/119 (60%), Positives = 92/119 (77%)
 Frame = -2

Query: 359 VTSRKDQEQYWRDKKQPYQYIPVDEFSQAFLSFYAGRNLYSALFTPYNKSKCHPAALVKR 180
           VTSRKDQEQYW DK+ PY++IPV EF+ AF  F+ G+N+   L  P++KSK HPAALV +
Sbjct: 435 VTSRKDQEQYWADKRMPYRFIPVQEFADAFQKFHVGQNIAEELARPFDKSKSHPAALVTQ 494

Query: 179 KYGLPKKELFKACLDREILLMKRSAFIYIFKAIQIAMVATITATVFLRTEMNHNSPQDG 3
           KY L   ELFKA L REILLMKR++F+Y+FK+ Q+ ++A IT TVFLRTEM+H +  DG
Sbjct: 495 KYALSNWELFKALLAREILLMKRNSFVYVFKSSQLIVIAVITMTVFLRTEMHHRTVGDG 553


>ref|XP_002972170.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300160469|gb|EFJ27087.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1781

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/119 (60%), Positives = 91/119 (76%)
 Frame = -2

Query: 359 VTSRKDQEQYWRDKKQPYQYIPVDEFSQAFLSFYAGRNLYSALFTPYNKSKCHPAALVKR 180
           VTSRKDQEQYW DK+ PY++IPV EF+ AF  F+ G+N+   L  P++KSK HPAALV +
Sbjct: 435 VTSRKDQEQYWADKRMPYRFIPVQEFADAFQKFHVGQNIAEELARPFDKSKSHPAALVTQ 494

Query: 179 KYGLPKKELFKACLDREILLMKRSAFIYIFKAIQIAMVATITATVFLRTEMNHNSPQDG 3
           KY L   ELFKA L REILLMKR++F+Y+FK  Q+ ++A IT TVFLRTEM+H +  DG
Sbjct: 495 KYALSNWELFKALLAREILLMKRNSFVYVFKGSQLIVIAVITMTVFLRTEMHHRTVGDG 553


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