BLASTX nr result

ID: Coptis21_contig00020835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020835
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278148.1| PREDICTED: uncharacterized protein LOC100261...   191   2e-46
ref|XP_002325083.1| predicted protein [Populus trichocarpa] gi|2...   190   3e-46
emb|CAN66858.1| hypothetical protein VITISV_029168 [Vitis vinifera]   190   3e-46
ref|NP_001242602.1| uncharacterized protein LOC100812211 [Glycin...   190   4e-46
ref|XP_003549503.1| PREDICTED: UPF0066 protein HI_0510-like [Gly...   187   4e-45

>ref|XP_002278148.1| PREDICTED: uncharacterized protein LOC100261628 [Vitis vinifera]
           gi|297735319|emb|CBI17759.3| unnamed protein product
           [Vitis vinifera]
          Length = 384

 Score =  191 bits (485), Expect = 2e-46
 Identities = 97/182 (53%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
 Frame = -3

Query: 884 GVDLVDGTPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWVTT 705
           GVDLVDGTPVLD+KPYLPYC+ ++ A++P WV+DD+LL VASV FS +F S+LA+CWV  
Sbjct: 201 GVDLVDGTPVLDVKPYLPYCDCVQGAALPKWVEDDNLLTVASVNFSDDFPSALAECWVIA 260

Query: 704 EKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDEIL 525
           EK SLYAS +E+QSL KQVLSWDIRSLSQR RPHN +    + +     SDL+D + E +
Sbjct: 261 EKKSLYASPNELQSLIKQVLSWDIRSLSQRDRPHNSLFSMGSSAAVDKTSDLDDWQAEEV 320

Query: 524 PHENAQSLVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSS-TMW 348
             E+    +P SED+ Y+L+LE  D+SY+I+ +GNVLV K  +SS+  +   + S+  +W
Sbjct: 321 KRESEPVALP-SEDIIYHLILEGLDVSYRIDCNGNVLVEKITLSSDIPKNNRNGSNYKIW 379

Query: 347 TE 342
           ++
Sbjct: 380 SD 381


>ref|XP_002325083.1| predicted protein [Populus trichocarpa] gi|222866517|gb|EEF03648.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  190 bits (483), Expect = 3e-46
 Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 2/183 (1%)
 Frame = -3

Query: 884 GVDLVDGTPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWVTT 705
           GVDLVDGTP+LDIKPYLPYC+SI+ A+VP WV  D++LAVASV FS  F SSL+DCW T 
Sbjct: 215 GVDLVDGTPILDIKPYLPYCDSIQGAAVPEWVMVDNMLAVASVNFSEGFSSSLSDCWETA 274

Query: 704 EKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKD-EI 528
           +K SLYAS DE+Q L KQVLSWDIRS+SQR +PH+ +++T N     +  D   ++D E 
Sbjct: 275 KKKSLYASPDELQCLIKQVLSWDIRSISQRNQPHDPLIKTGNGEAPHSALDSNQNQDQEA 334

Query: 527 LPHENAQSLVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLR-RQHSCSSTM 351
             +EN+Q   PS  DVTY+L+LE  D+SY+I+ +GNV+V   ++S + L   Q+  S  M
Sbjct: 335 SDNENSQVCHPSG-DVTYHLILEGMDVSYRIDFNGNVIVENVVVSPDILNGNQNRSSFLM 393

Query: 350 WTE 342
           W +
Sbjct: 394 WRD 396


>emb|CAN66858.1| hypothetical protein VITISV_029168 [Vitis vinifera]
          Length = 551

 Score =  190 bits (483), Expect = 3e-46
 Identities = 97/182 (53%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
 Frame = -3

Query: 884 GVDLVDGTPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWVTT 705
           GVDLVDGTPVLD+KPYLPYC+ ++ A++P WV+DD+LL VASV FS +F S+LA+CWV  
Sbjct: 223 GVDLVDGTPVLDVKPYLPYCDCVQGAALPKWVEDDNLLTVASVNFSDDFPSALAECWVIA 282

Query: 704 EKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDEIL 525
           EK SLYAS +E+QSL KQVLSWDIRSLSQR RPHN +    + +     SDL D + E +
Sbjct: 283 EKKSLYASPNELQSLIKQVLSWDIRSLSQRDRPHNSLFSMGSSAAVDKTSDLNDWQAEEV 342

Query: 524 PHENAQSLVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSS-TMW 348
             E+    +P SED+ Y+L+LE  D+SY+I+ +GNVLV K  +SS+  +   + S+  +W
Sbjct: 343 QRESEPVALP-SEDIIYHLILEGLDVSYRIDCNGNVLVEKITLSSDIPKNNRNGSNYKIW 401

Query: 347 TE 342
           ++
Sbjct: 402 SD 403


>ref|NP_001242602.1| uncharacterized protein LOC100812211 [Glycine max]
           gi|255642295|gb|ACU21412.1| unknown [Glycine max]
          Length = 394

 Score =  190 bits (482), Expect = 4e-46
 Identities = 95/182 (52%), Positives = 129/182 (70%), Gaps = 1/182 (0%)
 Frame = -3

Query: 884 GVDLVDGTPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWVTT 705
           GVDLVDGTPVLDIKPYLPYC+SI++A+VP W+ +D+LL+VAS+ FS  F S+L DCW+  
Sbjct: 211 GVDLVDGTPVLDIKPYLPYCDSIQEAAVPNWLMEDNLLSVASISFSDHFTSALEDCWIMA 270

Query: 704 EKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDE-I 528
           EK SLYAS  E QSL KQVLSWDIRSLSQR RPH+ +L+ +N     N SD+++ ++E  
Sbjct: 271 EKKSLYASTSEFQSLIKQVLSWDIRSLSQRNRPHDTLLKKENDELLGNTSDVDEHQEETT 330

Query: 527 LPHENAQSLVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSSTMW 348
           L  E  Q+ + S+E + Y+L+LE  D+SY+I+ DG V+V K   S     + + C+   W
Sbjct: 331 LVREREQNALNSNE-IIYHLILEGLDVSYRIDHDGYVIVEKISTSDVQDNKPNFCNYLTW 389

Query: 347 TE 342
            +
Sbjct: 390 KD 391


>ref|XP_003549503.1| PREDICTED: UPF0066 protein HI_0510-like [Glycine max]
          Length = 394

 Score =  187 bits (474), Expect = 4e-45
 Identities = 94/182 (51%), Positives = 130/182 (71%), Gaps = 1/182 (0%)
 Frame = -3

Query: 884 GVDLVDGTPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWVTT 705
           GVDLVDGTPVLDIKPYLPYC++I++A+VP W+ +D+LL+VASV FS  F S+L + W+  
Sbjct: 211 GVDLVDGTPVLDIKPYLPYCDNIQEATVPNWLMEDNLLSVASVSFSEHFTSALKNIWIMV 270

Query: 704 EKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDE-I 528
           EK SLYAS  E+QSL KQVLSWDIRSLSQR RPH+ +L+ +N     N +D+++ +DE  
Sbjct: 271 EKKSLYASPGELQSLIKQVLSWDIRSLSQRNRPHDTLLKKENDELLGNTADVDEHQDETT 330

Query: 527 LPHENAQSLVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSSTMW 348
           L HE  Q+ + S+E + Y+L+LE  D+SY+I+ DG V+V K   S     + + C+   W
Sbjct: 331 LAHEREQNALNSNE-IIYHLILEGLDVSYRIDHDGYVIVEKISTSDVQDNKPNFCNYLTW 389

Query: 347 TE 342
            +
Sbjct: 390 KD 391


Top