BLASTX nr result
ID: Coptis21_contig00020829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00020829
(750 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus] 111 3e-45
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 122 5e-45
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 117 8e-45
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 117 2e-44
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 115 6e-44
>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
Length = 962
Score = 111 bits (277), Expect(2) = 3e-45
Identities = 56/130 (43%), Positives = 78/130 (60%)
Frame = -2
Query: 524 FMFVYGYLPRAPIDLAPIPDQTRIHGKAEDYVKQLQKVHHNTYQHLLDTTKKYKQAADQK 345
F VY PR DLA +P +AE V+++Q +H + HL ++T+ YK+AAD+K
Sbjct: 277 FEVVYTKQPRLTFDLASLPTTIDTSSEAEKMVEKIQNLHEEVHNHLKESTQSYKKAADRK 336
Query: 344 RRFVEFEVGDLVYAILTKDRFPSREYNKLASKKIGPIEVLEKINSNAYKLKLPSHMCTSD 165
RR F GDLV L K RFP+ YNKL +++GP VLEKI NAY+++LP +
Sbjct: 337 RRQATFTEGDLVMIHLRKIRFPTGTYNKLKDRQLGPFRVLEKIGDNAYRIELPLDLNVHP 396
Query: 164 VFNVKHLVRY 135
+FNV L +Y
Sbjct: 397 IFNVADLKQY 406
Score = 97.1 bits (240), Expect(2) = 3e-45
Identities = 44/78 (56%), Positives = 55/78 (70%)
Frame = -1
Query: 750 LGHFWRSLWRLVNSKLNFSSAYHPQTDGQTEIVNRSLGDLLRSLVGSHIKTWDQKLCQAE 571
L HFW++LW ++ L +S+ HPQTDGQTE+ NR+LG+L+R L GS K WD L QAE
Sbjct: 202 LSHFWKTLWSKFDTTLKYSTTAHPQTDGQTEVTNRTLGNLIRCLSGSKPKQWDLALAQAE 261
Query: 570 FAFNRTVNRSSGLAPFYV 517
FAFN NRS+G PF V
Sbjct: 262 FAFNNMKNRSTGKCPFEV 279
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 122 bits (306), Expect(2) = 5e-45
Identities = 65/151 (43%), Positives = 92/151 (60%)
Frame = -2
Query: 524 FMFVYGYLPRAPIDLAPIPDQTRIHGKAEDYVKQLQKVHHNTYQHLLDTTKKYKQAADQK 345
F VYG+LPRAPIDL P+P +++ A++ + + K+H T +++ KYK A D+
Sbjct: 1456 FEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKG 1515
Query: 344 RRFVEFEVGDLVYAILTKDRFPSREYNKLASKKIGPIEVLEKINSNAYKLKLPSHMCTSD 165
R+ V F GDLV+ L KDRFP+ +KL + GP +VLEKIN NAYKL+LP+ S
Sbjct: 1516 RKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSP 1575
Query: 164 VFNVKHLVRYHEDNQCDLTSRANSFEHGGND 72
FN+ L Y + +L SR SF+ G +D
Sbjct: 1576 TFNIADLKPYLGEED-ELPSRTTSFQEGEDD 1605
Score = 85.5 bits (210), Expect(2) = 5e-45
Identities = 36/78 (46%), Positives = 57/78 (73%)
Frame = -1
Query: 750 LGHFWRSLWRLVNSKLNFSSAYHPQTDGQTEIVNRSLGDLLRSLVGSHIKTWDQKLCQAE 571
L HFWR LW + +KL FS+ HPQTDGQTE+VNR+L +LR+++ ++ K W++ L E
Sbjct: 1381 LSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIE 1440
Query: 570 FAFNRTVNRSSGLAPFYV 517
FA+NR+++ ++ + PF +
Sbjct: 1441 FAYNRSLHSTTKMCPFEI 1458
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 117 bits (294), Expect(2) = 8e-45
Identities = 63/151 (41%), Positives = 90/151 (59%)
Frame = -2
Query: 524 FMFVYGYLPRAPIDLAPIPDQTRIHGKAEDYVKQLQKVHHNTYQHLLDTTKKYKQAADQK 345
F VYG+LPRAPIDL PIP +++ A++ + + K+H T +++ +YK A D+
Sbjct: 1471 FEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKG 1530
Query: 344 RRFVEFEVGDLVYAILTKDRFPSREYNKLASKKIGPIEVLEKINSNAYKLKLPSHMCTSD 165
R+ V F GDLV+ L KDRFP +KL + GP +VLEKIN NAY+L+LP+ S
Sbjct: 1531 RKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFGVSP 1590
Query: 164 VFNVKHLVRYHEDNQCDLTSRANSFEHGGND 72
FN+ L Y + +L SR S + G +D
Sbjct: 1591 TFNIADLKPYLGEED-ELPSRTTSVQEGEDD 1620
Score = 89.4 bits (220), Expect(2) = 8e-45
Identities = 38/78 (48%), Positives = 58/78 (74%)
Frame = -1
Query: 750 LGHFWRSLWRLVNSKLNFSSAYHPQTDGQTEIVNRSLGDLLRSLVGSHIKTWDQKLCQAE 571
L HFWR LW + +KL FS+ HPQTDGQTE+VNRSL +LR+++ ++IK W++ L E
Sbjct: 1396 LSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIE 1455
Query: 570 FAFNRTVNRSSGLAPFYV 517
FA+NR+++ ++ + PF +
Sbjct: 1456 FAYNRSLHSTTKMCPFEI 1473
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 117 bits (292), Expect(2) = 2e-44
Identities = 63/151 (41%), Positives = 89/151 (58%)
Frame = -2
Query: 524 FMFVYGYLPRAPIDLAPIPDQTRIHGKAEDYVKQLQKVHHNTYQHLLDTTKKYKQAADQK 345
F VYG+LPRAPIDL PIP +++ A++ + + K+H T +++ +YK A D+
Sbjct: 1468 FEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKG 1527
Query: 344 RRFVEFEVGDLVYAILTKDRFPSREYNKLASKKIGPIEVLEKINSNAYKLKLPSHMCTSD 165
R+ V F GDLV+ L KDRFP +KL + GP +VLEKIN NAY+L+LP S
Sbjct: 1528 RKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPXDFGVSP 1587
Query: 164 VFNVKHLVRYHEDNQCDLTSRANSFEHGGND 72
FN+ L Y + +L SR S + G +D
Sbjct: 1588 TFNIADLKPYLGEED-ELPSRTTSVQEGEDD 1617
Score = 88.6 bits (218), Expect(2) = 2e-44
Identities = 37/78 (47%), Positives = 58/78 (74%)
Frame = -1
Query: 750 LGHFWRSLWRLVNSKLNFSSAYHPQTDGQTEIVNRSLGDLLRSLVGSHIKTWDQKLCQAE 571
L HFWR LW + +KL FS+ HPQTDGQTE+VNRSL +LR+++ +++K W++ L E
Sbjct: 1393 LSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIE 1452
Query: 570 FAFNRTVNRSSGLAPFYV 517
FA+NR+++ ++ + PF +
Sbjct: 1453 FAYNRSLHSTTKMCPFEI 1470
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 115 bits (289), Expect(2) = 6e-44
Identities = 61/151 (40%), Positives = 88/151 (58%)
Frame = -2
Query: 524 FMFVYGYLPRAPIDLAPIPDQTRIHGKAEDYVKQLQKVHHNTYQHLLDTTKKYKQAADQK 345
F VYG LPRAPIDL P+P +++ A + + K+H T +++ +YK A+D+
Sbjct: 1415 FQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASDKG 1474
Query: 344 RRFVEFEVGDLVYAILTKDRFPSREYNKLASKKIGPIEVLEKINSNAYKLKLPSHMCTSD 165
R+ + FE GDLV+ L K+RFP +KL + GP +VLEKIN NAY+L LP+ S
Sbjct: 1475 RKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLDLPADFGVSP 1534
Query: 164 VFNVKHLVRYHEDNQCDLTSRANSFEHGGND 72
FN+ L Y + + +L SR + G ND
Sbjct: 1535 TFNIADLKPYLGE-EVELESRTTQMQEGEND 1564
Score = 88.2 bits (217), Expect(2) = 6e-44
Identities = 37/78 (47%), Positives = 57/78 (73%)
Frame = -1
Query: 750 LGHFWRSLWRLVNSKLNFSSAYHPQTDGQTEIVNRSLGDLLRSLVGSHIKTWDQKLCQAE 571
L HFWR+LW + +KL FS+ HPQTDGQTE+VNR+L +LR+++ +IK W+ L E
Sbjct: 1340 LSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIE 1399
Query: 570 FAFNRTVNRSSGLAPFYV 517
FA+NR+++ ++ + PF +
Sbjct: 1400 FAYNRSLHSTTKMCPFQI 1417