BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020809
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CBI20513.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   128   4e-28
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/123 (56%), Positives = 89/123 (72%)
 Frame = -2

Query: 427  DEMLTYAILDQVFCRIYEIEPVDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDP 248
            +E+   AILD+VF  I EIEPV+L+IGLDLL  +KEEL L PSR SLDFLL+ACV+ +D 
Sbjct: 705  NELAMEAILDEVFSLIAEIEPVNLKIGLDLLTAIKEELGLRPSRKSLDFLLAACVNGKDL 764

Query: 247  RCGRLVCEEYLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACE 68
               RL+  EY  AG   NVL++LR+YQ  LACG++K A  +L K+P  DPHV  ++KAC+
Sbjct: 765  DNSRLIWREYQTAGFTHNVLSFLRMYQACLACGDHKSAANILHKIPKDDPHVCCVIKACQ 824

Query: 67   LTY 59
             TY
Sbjct: 825  TTY 827


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/123 (56%), Positives = 89/123 (72%)
 Frame = -2

Query: 427 DEMLTYAILDQVFCRIYEIEPVDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDP 248
           +E+   AILD+VF  I EIEPV+L+IGLDLL  +KEEL L PSR SLDFLL+ACV+ +D 
Sbjct: 475 NELAMEAILDEVFSLIAEIEPVNLKIGLDLLTAIKEELGLRPSRKSLDFLLAACVNGKDL 534

Query: 247 RCGRLVCEEYLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACE 68
              RL+  EY  AG   NVL++LR+YQ  LACG++K A  +L K+P  DPHV  ++KAC+
Sbjct: 535 DNSRLIWREYQTAGFTHNVLSFLRMYQACLACGDHKSAANILHKIPKDDPHVCCVIKACQ 594

Query: 67  LTY 59
            TY
Sbjct: 595 TTY 597


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/123 (50%), Positives = 86/123 (69%)
 Frame = -2

Query: 427  DEMLTYAILDQVFCRIYEIEPVDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDP 248
            DE+    I D+VF  I E+EP DL IGLDLLQV+K+EL + PSR SLDFLLSAC  A+D 
Sbjct: 734  DELTMQVIFDEVFSLIAEMEPTDLLIGLDLLQVIKDELCVCPSRKSLDFLLSACAKAKDL 793

Query: 247  RCGRLVCEEYLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACE 68
                 + +EY  AG  +NV++YLR+YQ  L+ G+Y+ A+ +L ++   DPHVR +++AC+
Sbjct: 794  TNSLFIWKEYHAAGYPYNVISYLRMYQALLSSGDYRSAKVILAEIQKDDPHVRRMIQACQ 853

Query: 67   LTY 59
             TY
Sbjct: 854  KTY 856


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/123 (47%), Positives = 85/123 (69%)
 Frame = -2

Query: 427  DEMLTYAILDQVFCRIYEIEPVDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDP 248
            DE+    + D+VF ++ E EP +++IG+DLLQ +K+EL   PSR  LDFLL+ACV+A+D 
Sbjct: 640  DELAMEVLFDEVFSQVAETEPANVRIGMDLLQAIKDELGASPSRKCLDFLLTACVNAKDL 699

Query: 247  RCGRLVCEEYLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACE 68
                LV +EY  AGL +NV +YLR+YQ  LA G +  A+ +L K+P  DPHVR +++ C+
Sbjct: 700  GNSLLVWKEYQAAGLPYNVTSYLRMYQALLASGGHVSAKVMLNKIPKDDPHVRIVIQECQ 759

Query: 67   LTY 59
             TY
Sbjct: 760  RTY 762


>ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Brachypodium distachyon]
          Length = 859

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/123 (50%), Positives = 84/123 (68%)
 Frame = -2

Query: 427  DEMLTYAILDQVFCRIYEIEPVDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDP 248
            +E  TY ++DQVFC+I+E+EPV+L +G+ LL  VKE L L  SRTSLDFLLS CV A+D 
Sbjct: 715  NETSTYMVVDQVFCQIWEMEPVNLDVGMTLLHAVKE-LGLNLSRTSLDFLLSTCVKAKDS 773

Query: 247  RCGRLVCEEYLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACE 68
            R    +  EY  +GL  NVLT LR+ Q   + G+   A K+L K+P+ D HVR I+ +C+
Sbjct: 774  RRAHQIWTEYESSGLPHNVLTSLRMCQALFSSGQRTAAGKLLRKIPIEDHHVRYIINSCK 833

Query: 67   LTY 59
            +TY
Sbjct: 834  MTY 836