BLASTX nr result

ID: Coptis21_contig00020803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020803
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515468.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]    105   4e-21
emb|CBI21102.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_004145520.1| PREDICTED: neurochondrin-like [Cucumis sativ...    98   8e-19
gb|ADN34121.1| hypothetical protein [Cucumis melo subsp. melo]         96   4e-18

>ref|XP_002515468.1| conserved hypothetical protein [Ricinus communis]
           gi|223545412|gb|EEF46917.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 631

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/88 (62%), Positives = 68/88 (77%)
 Frame = +3

Query: 33  DPSFIMMASSICTLIFDSTSEEALLSHPDFKPSTLNSLARLIAKSLRTSGQDQMSDDAKT 212
           DPS +MMASSIC LIFD TSE+ALL HP F  S+L SL+R+IAKSL    QD MSD  K 
Sbjct: 544 DPSVLMMASSICALIFDYTSEQALLCHPKFNSSSLESLSRIIAKSLALLKQD-MSDVVKA 602

Query: 213 EGDLHQIITAGYTRWADRFPRIKEAVKR 296
           E DL +I+++G++RW+ RFPRI EAV+R
Sbjct: 603 EMDLLEIVSSGFSRWSHRFPRISEAVQR 630


>ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]
          Length = 629

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/98 (56%), Positives = 71/98 (72%)
 Frame = +3

Query: 3   AFASCTDFITDPSFIMMASSICTLIFDSTSEEALLSHPDFKPSTLNSLARLIAKSLRTSG 182
           A A  T+   +PS +MMASSIC LIFD TSE+ALL+HP+   ST+ SL++LI +SL T  
Sbjct: 531 ALAYWTEETDEPSIVMMASSICALIFDHTSEQALLNHPNIDHSTIASLSQLIVRSLATCA 590

Query: 183 QDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEAVKR 296
           Q+ M DD K++ DL  I+TAGY+RW+ RFP IK AV R
Sbjct: 591 QN-MGDDMKSDLDLLDIVTAGYSRWSHRFPHIKAAVGR 627


>emb|CBI21102.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/98 (56%), Positives = 71/98 (72%)
 Frame = +3

Query: 3   AFASCTDFITDPSFIMMASSICTLIFDSTSEEALLSHPDFKPSTLNSLARLIAKSLRTSG 182
           A A  T+   +PS +MMASSIC LIFD TSE+ALL+HP+   ST+ SL++LI +SL T  
Sbjct: 615 ALAYWTEETDEPSIVMMASSICALIFDHTSEQALLNHPNIDHSTIASLSQLIVRSLATCA 674

Query: 183 QDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEAVKR 296
           Q+ M DD K++ DL  I+TAGY+RW+ RFP IK AV R
Sbjct: 675 QN-MGDDMKSDLDLLDIVTAGYSRWSHRFPHIKAAVGR 711


>ref|XP_004145520.1| PREDICTED: neurochondrin-like [Cucumis sativus]
           gi|449485155|ref|XP_004157084.1| PREDICTED:
           neurochondrin-like [Cucumis sativus]
          Length = 634

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/98 (50%), Positives = 66/98 (67%)
 Frame = +3

Query: 3   AFASCTDFITDPSFIMMASSICTLIFDSTSEEALLSHPDFKPSTLNSLARLIAKSLRTSG 182
           A A+ T+   + S IMM  SIC LIFD TSE ALLS+P+F   +L+ L RL ++    S 
Sbjct: 535 AIANSTEDSRELSVIMMGGSICALIFDFTSENALLSNPNFADKSLDKLCRLFSRIFILSQ 594

Query: 183 QDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEAVKR 296
           Q  M+DD   + DL +IITAGY+RW DRFPR+++A+ R
Sbjct: 595 QKSMNDDEMAQMDLLEIITAGYSRWGDRFPRVQKAISR 632


>gb|ADN34121.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 136

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/96 (48%), Positives = 64/96 (66%)
 Frame = +3

Query: 3   AFASCTDFITDPSFIMMASSICTLIFDSTSEEALLSHPDFKPSTLNSLARLIAKSLRTSG 182
           A  + T+   + S IMMA SIC LIFD TSE ALL HP+F   +L+ L +L ++    S 
Sbjct: 35  AIVNSTEDSKELSVIMMAGSICALIFDFTSEAALLIHPNFADKSLDKLCKLFSRIFILSQ 94

Query: 183 QDQMSDDAKTEGDLHQIITAGYTRWADRFPRIKEAV 290
           Q  M+DD   + DL +IITAGY+RW DRFPR+++A+
Sbjct: 95  QQSMNDDVMAQMDLLEIITAGYSRWGDRFPRVQKAI 130


Top