BLASTX nr result

ID: Coptis21_contig00020793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020793
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...   129   2e-28
ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...   115   5e-24
ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865...   107   1e-21
ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865...   105   5e-21

>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score =  129 bits (325), Expect = 2e-28
 Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 11/134 (8%)
 Frame = -3

Query: 370 ERSERLKKVSISPKP--------RXXXXXXXXXEKRCPPGGGNSVILYTTT-GGNREPFK 218
           E  E++KK+ +SP P        R         EK+CPPGG N+V++YTTT  G R+ F+
Sbjct: 213 EEKEQIKKI-VSPIPKVQKLRNSRDCESILDLFEKKCPPGGANAVVIYTTTLRGIRKTFE 271

Query: 217 DSNKVRSMLQSHYIQMFERDIFKDALSREQLKELMGY--IKVPLLFVKGRLVGGADEVME 44
           D N VRS+L+SH+I MFERDI  D+  +E+L+ LMG   +KVPL+FVKGRL+GGADEV++
Sbjct: 272 DCNHVRSILESHHIHMFERDISMDSGLKEELRGLMGTKEVKVPLVFVKGRLIGGADEVVK 331

Query: 43  MEENGGLDILFDGI 2
           +EE G LDILFDGI
Sbjct: 332 LEEEGKLDILFDGI 345


>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/134 (50%), Positives = 94/134 (70%), Gaps = 11/134 (8%)
 Frame = -3

Query: 370 ERSERLKKV-SISPKPRXXXXXXXXXE-------KRCPPGGGNSVILYTTT-GGNREPFK 218
           E  E++K++ SI+PKP          E       ++CPPGG N+V+LYTTT  G R+ F+
Sbjct: 240 EEEEKVKRIISITPKPHQKFKNSLQLESILQSFEQKCPPGGENAVVLYTTTLRGIRKTFE 299

Query: 217 DSNKVRSMLQSHYIQMFERDIFKDALSREQLKELMG--YIKVPLLFVKGRLVGGADEVME 44
           D N VRS+++SH+I M ERDI  D+  +E+L+ LMG   +KVPL+FVKGRL+GGAD+V++
Sbjct: 300 DCNTVRSIIESHHIHMLERDISMDSGLKEELRRLMGTKVVKVPLVFVKGRLIGGADQVVK 359

Query: 43  MEENGGLDILFDGI 2
           +EE G L ILFDGI
Sbjct: 360 LEEEGKLGILFDGI 373


>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/100 (55%), Positives = 79/100 (79%), Gaps = 3/100 (3%)
 Frame = -3

Query: 292 KRCPPGGGNSVILYTTT-GGNREPFKDSNKVRSMLQSHYIQMFERDIFKDALSREQLKEL 116
           ++CPPGG N V++YTTT  G R+ F+D N  RS+++SH+I + ERD+  D+  +E+L+ L
Sbjct: 254 QKCPPGGENKVVIYTTTLRGIRKTFEDCNTARSIIESHHIHIVERDVSMDSGFKEELRRL 313

Query: 115 MGY--IKVPLLFVKGRLVGGADEVMEMEENGGLDILFDGI 2
           MG   +KVPL+FVKGRL+GGAD+V+++EE G L+ILFDGI
Sbjct: 314 MGTKEVKVPLVFVKGRLIGGADQVVKLEEEGKLEILFDGI 353


>ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449522666|ref|XP_004168347.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 397

 Score =  107 bits (267), Expect = 1e-21
 Identities = 62/133 (46%), Positives = 88/133 (66%), Gaps = 10/133 (7%)
 Frame = -3

Query: 370 ERSERLKK-VSISPKPRXXXXXXXXXE------KRCPPGGGNSVILYTTT-GGNREPFKD 215
           E  E++K+ VS +PK R                + CPPGG  SV++YTTT  G R+ F+D
Sbjct: 211 EEGEQIKRIVSETPKSRAARHFQESETALKKFEELCPPGGETSVVIYTTTLRGIRKTFED 270

Query: 214 SNKVRSMLQSHYIQMFERDIFKDALSREQLKELMGY--IKVPLLFVKGRLVGGADEVMEM 41
            NKVRS+++S+ I + ERD+  D+  +E+L+ LMG   +KVP +FVKGRL+GGA EV++M
Sbjct: 271 CNKVRSIVESYGIHVVERDVSMDSGFKEELRALMGSKEVKVPAVFVKGRLIGGAAEVLKM 330

Query: 40  EENGGLDILFDGI 2
           EE G L +LF+GI
Sbjct: 331 EEEGKLGVLFEGI 343


>ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 398

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/100 (50%), Positives = 78/100 (78%), Gaps = 3/100 (3%)
 Frame = -3

Query: 292 KRCPPGGGNSVILYTTT-GGNREPFKDSNKVRSMLQSHYIQMFERDIFKDALSREQLKEL 116
           ++ PPGG N V++YTTT  G R+ F++ NKVRS+++S+ + + ERD+  D+  +E+L++L
Sbjct: 245 EKLPPGGENCVVIYTTTLRGIRKTFEECNKVRSIIESYCVHVLERDVSMDSRFKEELRKL 304

Query: 115 MG--YIKVPLLFVKGRLVGGADEVMEMEENGGLDILFDGI 2
           MG   +KVP++FVKGR VGGA+EV+++EE G L +LF+GI
Sbjct: 305 MGTEQVKVPVVFVKGRFVGGAEEVVKLEEEGKLGVLFEGI 344


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