BLASTX nr result

ID: Coptis21_contig00020782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020782
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209...   216   4e-54
ref|XP_002523852.1| conserved hypothetical protein [Ricinus comm...   216   4e-54
gb|AEL99169.1| photosystem I subunit O, partial [Silene latifoli...   213   2e-53
emb|CAN83522.1| hypothetical protein VITISV_019056 [Vitis vinifera]   213   2e-53
emb|CAB75430.1| putative 16kDa membrane protein [Nicotiana tabacum]   213   2e-53

>ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209111 [Cucumis sativus]
          Length = 146

 Score =  216 bits (549), Expect = 4e-54
 Identities = 101/135 (74%), Positives = 116/135 (85%), Gaps = 2/135 (1%)
 Frame = -2

Query: 579 VAGLGTSSLFSPQRTN--LTSGFIKSRVAARNPLKQSNASGGRFTCFQRDWLRKDLSVIG 406
           VAGLGT+SL SP   +  L SGFIK  VAARNPL  + ASGG+FTCF+RDWLR+DL+VIG
Sbjct: 10  VAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERDWLRRDLNVIG 69

Query: 405 FGLIGWLAPSSIPLINGNSLTGLFFGSIGEELSHFPTPPAIDSQFWLWLVTWHFGLFVCL 226
           FGLIGW+APSSIP+I+G SLTGLFF SIG EL+HFP+PPA+ SQFWLWL+TWH GLF+ L
Sbjct: 70  FGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFITL 129

Query: 225 TFGQIGFKGRTESYF 181
           TFGQIGFKGRTE YF
Sbjct: 130 TFGQIGFKGRTEDYF 144


>ref|XP_002523852.1| conserved hypothetical protein [Ricinus communis]
           gi|223536940|gb|EEF38578.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score =  216 bits (549), Expect = 4e-54
 Identities = 98/133 (73%), Positives = 116/133 (87%)
 Frame = -2

Query: 579 VAGLGTSSLFSPQRTNLTSGFIKSRVAARNPLKQSNASGGRFTCFQRDWLRKDLSVIGFG 400
           V GL +SSL SP++  L SGF+KS V ARNPL+Q+ A+GG+F CF+R+WLRKDL+VIGFG
Sbjct: 11  VIGLCSSSLSSPKKICLGSGFVKSPVPARNPLRQTGANGGKFVCFERNWLRKDLNVIGFG 70

Query: 399 LIGWLAPSSIPLINGNSLTGLFFGSIGEELSHFPTPPAIDSQFWLWLVTWHFGLFVCLTF 220
           LIGWLAPS+IP I+G SLTGLFF SIG EL+HFP+PPA+ SQFWLWL+TWH GLF+CLTF
Sbjct: 71  LIGWLAPSTIPAIDGKSLTGLFFESIGSELAHFPSPPALTSQFWLWLITWHLGLFLCLTF 130

Query: 219 GQIGFKGRTESYF 181
           GQIGFKGRTE YF
Sbjct: 131 GQIGFKGRTEDYF 143


>gb|AEL99169.1| photosystem I subunit O, partial [Silene latifolia]
           gi|343172934|gb|AEL99170.1| photosystem I subunit O,
           partial [Silene latifolia]
          Length = 146

 Score =  213 bits (543), Expect = 2e-53
 Identities = 104/137 (75%), Positives = 118/137 (86%), Gaps = 4/137 (2%)
 Frame = -2

Query: 579 VAGLGTSSLFSP--QRTNLTSGFIKSRVAARNPLKQS-NASGGRFTC-FQRDWLRKDLSV 412
           V GLGTS+L     + T L+SGF+KS+VAA NPL+Q+   SGGRFTC FQRDWLR+DL+V
Sbjct: 10  VVGLGTSTLSRSYAKSTTLSSGFLKSKVAAVNPLRQACGTSGGRFTCSFQRDWLRRDLNV 69

Query: 411 IGFGLIGWLAPSSIPLINGNSLTGLFFGSIGEELSHFPTPPAIDSQFWLWLVTWHFGLFV 232
           IGFGLIGWLAPSSIP I+GNSL+GLFF SIGEEL+HFPTPPA+ SQFWLWLV WH GLF+
Sbjct: 70  IGFGLIGWLAPSSIPAIDGNSLSGLFFSSIGEELAHFPTPPAVTSQFWLWLVLWHLGLFL 129

Query: 231 CLTFGQIGFKGRTESYF 181
           CLTFGQIGFKGRTE YF
Sbjct: 130 CLTFGQIGFKGRTEEYF 146


>emb|CAN83522.1| hypothetical protein VITISV_019056 [Vitis vinifera]
          Length = 144

 Score =  213 bits (543), Expect = 2e-53
 Identities = 101/138 (73%), Positives = 115/138 (83%), Gaps = 5/138 (3%)
 Frame = -2

Query: 579 VAGLGTSSLF-----SPQRTNLTSGFIKSRVAARNPLKQSNASGGRFTCFQRDWLRKDLS 415
           V GLG+SSL      S +RT+L SGF+K+ VA RNPL+Q+ A GG+FTCF+RDWLR DL+
Sbjct: 7   VIGLGSSSLSPARSSSSKRTHLASGFVKAPVAPRNPLRQAKACGGKFTCFERDWLRTDLN 66

Query: 414 VIGFGLIGWLAPSSIPLINGNSLTGLFFGSIGEELSHFPTPPAIDSQFWLWLVTWHFGLF 235
           VIGFGLI WLAPSSIP I+GNSLTGLFF SIG ELSHFPT PA+ S FWLW+VTWH GLF
Sbjct: 67  VIGFGLIAWLAPSSIPAIDGNSLTGLFFSSIGTELSHFPTGPALTSPFWLWMVTWHLGLF 126

Query: 234 VCLTFGQIGFKGRTESYF 181
           +CLTFGQIGFKGRTE YF
Sbjct: 127 LCLTFGQIGFKGRTEDYF 144


>emb|CAB75430.1| putative 16kDa membrane protein [Nicotiana tabacum]
          Length = 143

 Score =  213 bits (543), Expect = 2e-53
 Identities = 101/134 (75%), Positives = 115/134 (85%), Gaps = 1/134 (0%)
 Frame = -2

Query: 579 VAGLGTSSLFSPQRTNLTSGFIKSRVAARNPLKQSNASGGRFTC-FQRDWLRKDLSVIGF 403
           V GL +SSL SP++  L+SG +KS V ARNPL+ + ASGG+FTC FQRDWLR+DL+VIGF
Sbjct: 8   VVGLVSSSLSSPKKACLSSGLLKSPVTARNPLRVAQASGGKFTCNFQRDWLRRDLNVIGF 67

Query: 402 GLIGWLAPSSIPLINGNSLTGLFFGSIGEELSHFPTPPAIDSQFWLWLVTWHFGLFVCLT 223
           GLIGWLAPSSIP+ING SL+GLFF SIG ELSHFPT PA+ SQFWLWLV WH GLF+CLT
Sbjct: 68  GLIGWLAPSSIPVINGKSLSGLFFDSIGTELSHFPTGPALTSQFWLWLVCWHLGLFICLT 127

Query: 222 FGQIGFKGRTESYF 181
           FGQIGFKGRTE YF
Sbjct: 128 FGQIGFKGRTEDYF 141


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