BLASTX nr result

ID: Coptis21_contig00020778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020778
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517647.1| AMP-activated protein kinase, gamma regulato...   305   9e-81
ref|XP_002265369.1| PREDICTED: SNF1-related protein kinase regul...   297   1e-78
emb|CAN64662.1| hypothetical protein VITISV_035347 [Vitis vinifera]   296   4e-78
gb|AAO61675.1| SNF4b [Medicago truncatula]                            292   6e-77
ref|XP_003597910.1| SNF4b [Medicago truncatula] gi|355486958|gb|...   285   1e-74

>ref|XP_002517647.1| AMP-activated protein kinase, gamma regulatory subunit, putative
           [Ricinus communis] gi|223543279|gb|EEF44811.1|
           AMP-activated protein kinase, gamma regulatory subunit,
           putative [Ricinus communis]
          Length = 403

 Score =  305 bits (780), Expect = 9e-81
 Identities = 160/259 (61%), Positives = 193/259 (74%), Gaps = 16/259 (6%)
 Frame = -3

Query: 730 LEGSNE-IREKKVGDLMVNNRRL---------AHTMNXXXXXXXXXXXXXXXPGHWIGAG 581
           L   NE +++++V DLMV+ RRL         AHTMN               PGHWIGAG
Sbjct: 37  LPSQNERLKDRRVKDLMVDKRRLVEVPYTASLAHTMNTLVANQVVAVPVAAPPGHWIGAG 96

Query: 580 GSMILESDKQTGAVRKHYIGMVTMFDILAHIADDDHGSG------DLDERMSVPVSSVIG 419
           GSMI+ESDKQTGAVRKHYIGMVTM DILAHIA DD  +G      DLD +MSVPVSS+IG
Sbjct: 97  GSMIMESDKQTGAVRKHYIGMVTMLDILAHIAGDDQMNGGDDDASDLDRKMSVPVSSIIG 156

Query: 418 HSLEGLSLWTLNPNTSVLDCMEVFSKGVHRALIPVDSHMENISGVELADSSSSYRMLTQV 239
           H LEGLSLWTLNPNTS+LDCMEVFSKG+HRAL+P+DSHMENISGVEL +S+SSYRMLTQ+
Sbjct: 157 HCLEGLSLWTLNPNTSILDCMEVFSKGIHRALVPLDSHMENISGVELVESASSYRMLTQM 216

Query: 238 DVLRFLMSYGSKLQNMFCGTVGELGAITEDVWAVNSRTKVIEAIKYMRTASLNAVPIVEA 59
           D+++FL  + S+LQ      V E+GA+ E+V+A+   TKVI+AIK MR + LNAVPIV A
Sbjct: 217 DLVKFLKEHASELQGFISRPVSEIGAVNENVYAITGHTKVIDAIKCMRASLLNAVPIVVA 276

Query: 58  LDVMDEDDMQLINGKGRKL 2
            D +++   +LINGKGRKL
Sbjct: 277 SDSLEDYSKKLINGKGRKL 295


>ref|XP_002265369.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-like PV42a [Vitis vinifera]
           gi|297743469|emb|CBI36336.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  297 bits (761), Expect = 1e-78
 Identities = 159/245 (64%), Positives = 183/245 (74%), Gaps = 9/245 (3%)
 Frame = -3

Query: 709 REKKVGDLMVNNRRL---------AHTMNXXXXXXXXXXXXXXXPGHWIGAGGSMILESD 557
           REKKVGD+ V  RRL         AHT+N               PGHWIGAGGSMI+ESD
Sbjct: 11  REKKVGDVAVEKRRLVEVPYTATLAHTLNALVANRVVAVPVAAPPGHWIGAGGSMIMESD 70

Query: 556 KQTGAVRKHYIGMVTMFDILAHIADDDHGSGDLDERMSVPVSSVIGHSLEGLSLWTLNPN 377
           KQTGAVRKHYIGMVTM DIL HI   D    D +  MSVPVSS+IGH LEGLSLWTLNP+
Sbjct: 71  KQTGAVRKHYIGMVTMLDILGHIGGGDGDGFDFEGIMSVPVSSIIGHCLEGLSLWTLNPH 130

Query: 376 TSVLDCMEVFSKGVHRALIPVDSHMENISGVELADSSSSYRMLTQVDVLRFLMSYGSKLQ 197
           TS+LDCME+FSKG+HRAL+P+DSHMENISGVELA+S+SSYRMLTQ+DVLRFL  + S+L 
Sbjct: 131 TSILDCMEMFSKGIHRALVPLDSHMENISGVELAESASSYRMLTQMDVLRFLKEHASELN 190

Query: 196 NMFCGTVGELGAITEDVWAVNSRTKVIEAIKYMRTASLNAVPIVEALDVMDEDDMQLING 17
           ++   +VGELG I E V+ V   TKV+EAIK M+ ASLNAVPI+EA D   ED  +LING
Sbjct: 191 SVLSCSVGELGVIHETVFGVTDGTKVMEAIKCMKVASLNAVPIIEASD-GTEDCTKLING 249

Query: 16  KGRKL 2
           KGRKL
Sbjct: 250 KGRKL 254


>emb|CAN64662.1| hypothetical protein VITISV_035347 [Vitis vinifera]
          Length = 361

 Score =  296 bits (757), Expect = 4e-78
 Identities = 161/252 (63%), Positives = 186/252 (73%), Gaps = 12/252 (4%)
 Frame = -3

Query: 721 SNE---IREKKVGDLMVNNRRL---------AHTMNXXXXXXXXXXXXXXXPGHWIGAGG 578
           SNE   +REKKVGD+ V  RRL         AHT+N               PGHWIGAGG
Sbjct: 4   SNEKRGLREKKVGDVAVEKRRLVEVPYTATLAHTLNALVANRAVAVPVAAPPGHWIGAGG 63

Query: 577 SMILESDKQTGAVRKHYIGMVTMFDILAHIADDDHGSGDLDERMSVPVSSVIGHSLEGLS 398
           SMI+ESDKQTGAVRKHYIGMVTM DIL HI   D    D +  MSVPVSS+IGH LEGLS
Sbjct: 64  SMIMESDKQTGAVRKHYIGMVTMLDILGHIGGGDGDGFDFEGIMSVPVSSIIGHCLEGLS 123

Query: 397 LWTLNPNTSVLDCMEVFSKGVHRALIPVDSHMENISGVELADSSSSYRMLTQVDVLRFLM 218
           LWTLNP+TS+LDCME+FSKG+HRAL+P+DSHMENISGVELA+S+SSYRMLTQ+DVLRFL 
Sbjct: 124 LWTLNPHTSILDCMEMFSKGIHRALVPLDSHMENISGVELAESASSYRMLTQMDVLRFLK 183

Query: 217 SYGSKLQNMFCGTVGELGAITEDVWAVNSRTKVIEAIKYMRTASLNAVPIVEALDVMDED 38
            + S+L ++   +VGEL  I E V+ V   TKV+EAIK M+ ASLNAVPI+EA D   ED
Sbjct: 184 EHASELNSVLSCSVGELXVIHETVFGVTDGTKVMEAIKCMKVASLNAVPIIEASD-GTED 242

Query: 37  DMQLINGKGRKL 2
             +LINGKGRKL
Sbjct: 243 CTKLINGKGRKL 254


>gb|AAO61675.1| SNF4b [Medicago truncatula]
          Length = 382

 Score =  292 bits (747), Expect = 6e-77
 Identities = 160/257 (62%), Positives = 191/257 (74%), Gaps = 17/257 (6%)
 Frame = -3

Query: 721 SNEIREKKVGDLMVNNRRLAH---------TMNXXXXXXXXXXXXXXXPGHWIGAGGSMI 569
           S  ++EKKV DLMVN +RL           TMN               PG WIGAGGSMI
Sbjct: 16  SMNLKEKKVKDLMVNKKRLVEVPYTASLGQTMNTLVANKVVAVPVAAPPGQWIGAGGSMI 75

Query: 568 LESDKQTGAVRKHYIGMVTMFDILAHIADDDHGSG------DLDERMSVPVSSVIGHSLE 407
           +ESDKQTGAVRKHYIGMVTM DI+AHIA DDH SG      DLD+RMSVPVSS+IGHS E
Sbjct: 76  VESDKQTGAVRKHYIGMVTMLDIVAHIAGDDHLSGGDDVEEDLDQRMSVPVSSIIGHSFE 135

Query: 406 GLSLWTLNPNTSVLDCMEVFSKGVHRALIPVDSHMENIS-GVELADSSSSYRMLTQVDVL 230
           GLSLWTLNPNTS+LDCMEV SKGVHRA+IP DS +EN+S GVEL +SSSSY+MLTQ+DVL
Sbjct: 136 GLSLWTLNPNTSLLDCMEVLSKGVHRAMIPTDSQIENVSAGVELIESSSSYQMLTQMDVL 195

Query: 229 RFLMSYGSKLQN-MFCGTVGELGAITEDVWAVNSRTKVIEAIKYMRTASLNAVPIVEALD 53
           RFL  +G++LQ+ +   +V +LGAITE ++A+  RTK+I+AIK ++ A LNA+PIV A D
Sbjct: 196 RFLKDHGNELQSTLHSHSVQDLGAITERIYAITERTKLIDAIKCLKAAMLNALPIVRASD 255

Query: 52  VMDEDDMQLINGKGRKL 2
           V D+D  Q ING+ RKL
Sbjct: 256 VGDDDHKQHINGRCRKL 272


>ref|XP_003597910.1| SNF4b [Medicago truncatula] gi|355486958|gb|AES68161.1| SNF4b
           [Medicago truncatula]
          Length = 394

 Score =  285 bits (728), Expect = 1e-74
 Identities = 156/251 (62%), Positives = 186/251 (74%), Gaps = 17/251 (6%)
 Frame = -3

Query: 721 SNEIREKKVGDLMVNNRRLAH---------TMNXXXXXXXXXXXXXXXPGHWIGAGGSMI 569
           S  ++EKKV DLMVN +RL           TMN               PG WIGAGGSMI
Sbjct: 16  SMNLKEKKVKDLMVNKKRLVEVPYTASLGQTMNTLVANKVVAVPVAAPPGQWIGAGGSMI 75

Query: 568 LESDKQTGAVRKHYIGMVTMFDILAHIADDDHGSG------DLDERMSVPVSSVIGHSLE 407
           +ESDKQTGAVRKHYIGMVTM DI+AHIA DDH SG      DLD+RMSVPVSS+IGHS E
Sbjct: 76  VESDKQTGAVRKHYIGMVTMLDIVAHIAGDDHLSGGDDVEEDLDQRMSVPVSSIIGHSFE 135

Query: 406 GLSLWTLNPNTSVLDCMEVFSKGVHRALIPVDSHMENIS-GVELADSSSSYRMLTQVDVL 230
           GLSLWTLNPNTS+LDCMEV SKGVHRA+IP DS +EN+S GVEL +SSSSY+MLTQ+DVL
Sbjct: 136 GLSLWTLNPNTSLLDCMEVLSKGVHRAMIPTDSQIENVSAGVELIESSSSYQMLTQMDVL 195

Query: 229 RFLMSYGSKLQN-MFCGTVGELGAITEDVWAVNSRTKVIEAIKYMRTASLNAVPIVEALD 53
           RFL  +G++LQ+ +   +V +LGAITE ++A+  RTK+I+AIK ++ A LNA+PIV A D
Sbjct: 196 RFLKDHGNELQSTLHSHSVQDLGAITERIYAITERTKLIDAIKCLKAAMLNALPIVRASD 255

Query: 52  VMDEDDMQLIN 20
           V D+D  Q IN
Sbjct: 256 VGDDDHKQHIN 266


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