BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020768
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   195   4e-48
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              195   4e-48
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   192   3e-47
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-...   189   3e-46
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45

>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  195 bits (495), Expect = 4e-48
 Identities = 96/120 (80%), Positives = 104/120 (86%)
 Frame = -3

Query: 361 KTYYHTTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSK 182
           KTYYHTTTALRQL            SKNMFETIAR+LLLERTDHTLELYEGSGSNWRL K
Sbjct: 19  KTYYHTTTALRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTLELYEGSGSNWRLVK 78

Query: 181 SGTPGNLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDD 2
           SGTPGNLGSFED+LFANNEMQDSPV+VAL P FREN CT+G+GF+DLT+RV+GLAEFLDD
Sbjct: 79  SGTPGNLGSFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVDLTRRVLGLAEFLDD 138


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  195 bits (495), Expect = 4e-48
 Identities = 96/120 (80%), Positives = 104/120 (86%)
 Frame = -3

Query: 361 KTYYHTTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSK 182
           KTYYHTTTALRQL            SKNMFETIAR+LLLERTDHTLELYEGSGSNWRL K
Sbjct: 59  KTYYHTTTALRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTLELYEGSGSNWRLVK 118

Query: 181 SGTPGNLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDD 2
           SGTPGNLGSFED+LFANNEMQDSPV+VAL P FREN CT+G+GF+DLT+RV+GLAEFLDD
Sbjct: 119 SGTPGNLGSFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVDLTRRVLGLAEFLDD 178


>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
           gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
           MSH2, putative [Ricinus communis]
          Length = 936

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/120 (78%), Positives = 102/120 (85%)
 Frame = -3

Query: 361 KTYYHTTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSK 182
           KTYYHTTTALRQL            SKNMFETIARDLLLERTDHTLELYEGSGSNWRL K
Sbjct: 55  KTYYHTTTALRQLGSGPDGLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVK 114

Query: 181 SGTPGNLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDD 2
           SGTPGNLGSFED+LFANNEMQDSP V A+ P FREN C+IG+G++DLTKR++GLAEFLDD
Sbjct: 115 SGTPGNLGSFEDVLFANNEMQDSPAVAAVIPNFRENGCSIGLGYVDLTKRILGLAEFLDD 174


>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
          Length = 942

 Score =  189 bits (479), Expect = 3e-46
 Identities = 93/120 (77%), Positives = 103/120 (85%)
 Frame = -3

Query: 361 KTYYHTTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSK 182
           KTYYHTTTA+RQL            S+NMFETIARDLLLERTDHTLELYEGSGSNWRL K
Sbjct: 60  KTYYHTTTAMRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLELYEGSGSNWRLVK 119

Query: 181 SGTPGNLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDD 2
           SGTPGN+GSFED+LFAN+EMQDSPVVVAL   +REN CTIG+GF+DLTKRV+G+AEFLDD
Sbjct: 120 SGTPGNIGSFEDVLFANSEMQDSPVVVALSLNYRENGCTIGLGFVDLTKRVLGMAEFLDD 179


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
           predicted protein [Populus trichocarpa]
          Length = 944

 Score =  187 bits (474), Expect = 1e-45
 Identities = 93/120 (77%), Positives = 101/120 (84%)
 Frame = -3

Query: 361 KTYYHTTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSK 182
           KTYYHTTTALRQL            SKNMFETIARDLLLERTDHTLELYEGSGSNW+L K
Sbjct: 61  KTYYHTTTALRQLGSGSNGLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWKLVK 120

Query: 181 SGTPGNLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDD 2
           SGTPGNLGSFED+LFANN+MQDSPVVVAL   FRE  CT+G+ ++DLTKRV+GLAEFLDD
Sbjct: 121 SGTPGNLGSFEDVLFANNDMQDSPVVVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDD 180