BLASTX nr result

ID: Coptis21_contig00020765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020765
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42863.1| unknown [Lotus japonicus]                               59   4e-07
ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycin...    58   7e-07
ref|XP_004161191.1| PREDICTED: SEC12-like protein 2-like [Cucumi...    55   6e-06
ref|XP_004140431.1| PREDICTED: SEC12-like protein 2-like [Cucumi...    55   6e-06

>gb|AFK42863.1| unknown [Lotus japonicus]
          Length = 209

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   KKAHLGLVTVLMFSDDSRHVASASLDSSARVTLIESKKKQNG 128
           KKAHLG+VT L FS DSR +AS S+DSSARVT+IE KK   G
Sbjct: 142 KKAHLGIVTALAFSPDSRALASVSMDSSARVTIIEGKKTSGG 183


>ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycine max]
          Length = 400

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   KKAHLGLVTVLMFSDDSRHVASASLDSSARVTLIESKK 116
           KKAHLG+VT L FS DSR VAS S+DSSARVT+IE KK
Sbjct: 335 KKAHLGIVTALAFSPDSRAVASVSMDSSARVTIIEEKK 372


>ref|XP_004161191.1| PREDICTED: SEC12-like protein 2-like [Cucumis sativus]
          Length = 135

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +3

Query: 3   KKAHLGLVTVLMFSDDSRHVASASLDSSARVTLIESKKKQ 122
           KKAHLG VT L FS DSR + SAS+DSSARVT+IE ++K+
Sbjct: 72  KKAHLGFVTALSFSPDSRALVSASMDSSARVTVIEEEQKK 111


>ref|XP_004140431.1| PREDICTED: SEC12-like protein 2-like [Cucumis sativus]
          Length = 393

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +3

Query: 3   KKAHLGLVTVLMFSDDSRHVASASLDSSARVTLIESKKKQ 122
           KKAHLG VT L FS DSR + SAS+DSSARVT+IE ++K+
Sbjct: 330 KKAHLGFVTALSFSPDSRALVSASMDSSARVTVIEEEQKK 369


Top