BLASTX nr result

ID: Coptis21_contig00020750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020750
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|2...   354   7e-96
ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...   351   8e-95
ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana] gi|122...   340   1e-91
emb|CAA16796.1| starch synthase-like protein [Arabidopsis thalia...   340   1e-91
ref|XP_002519725.1| starch synthase, putative [Ricinus communis]...   340   1e-91

>ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|222845772|gb|EEE83319.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score =  354 bits (909), Expect = 7e-96
 Identities = 161/180 (89%), Positives = 176/180 (97%)
 Frame = +3

Query: 18  MQALDMVLESYFDGRLFKNKVWVGVVEGLPVYFIEPQHPAKFFWRGQIYGEHDDFKRFSY 197
           ++ALD+V+ESYFDG+L+KNK+WVG VEGLPVYFIEPQHP KFFWRGQ YGEHDDF+RFS+
Sbjct: 444 LRALDVVVESYFDGKLYKNKIWVGTVEGLPVYFIEPQHPEKFFWRGQFYGEHDDFRRFSF 503

Query: 198 FSRAALELILQAGKKPDILHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGSA 377
           FSRAALEL+LQ+GKKPDI+HCHDWQTAFVAPLYWD+YAPKGLNSARICFTCHNFEYQG+A
Sbjct: 504 FSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTA 563

Query: 378 PASELASCGLDVSQLNRPDRMQDNSANDRVNPVKGAVVFSNIVTTVSPTYAQEVRTAEGG 557
           PASELASCGLDV QLNRPDRMQDNSA+DRVNPVKGAVVFSNIVTTVSPTYAQEVRTAEGG
Sbjct: 564 PASELASCGLDVHQLNRPDRMQDNSAHDRVNPVKGAVVFSNIVTTVSPTYAQEVRTAEGG 623


>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
            gi|297740652|emb|CBI30834.3| unnamed protein product
            [Vitis vinifera]
          Length = 1011

 Score =  351 bits (900), Expect = 8e-95
 Identities = 159/180 (88%), Positives = 173/180 (96%)
 Frame = +3

Query: 18   MQALDMVLESYFDGRLFKNKVWVGVVEGLPVYFIEPQHPAKFFWRGQIYGEHDDFKRFSY 197
            ++ LDM LESYFDGRLF+NKVWVG VEGLPVYFIEP HP+KFFWRG +YGEHDDF+RFSY
Sbjct: 568  LRVLDMELESYFDGRLFRNKVWVGTVEGLPVYFIEPHHPSKFFWRGTVYGEHDDFRRFSY 627

Query: 198  FSRAALELILQAGKKPDILHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGSA 377
            FSRAALEL+LQAGKKPDI+HCHDWQTAFVAPLYWD+YAPKGLNSARICFTCHNFEYQG+A
Sbjct: 628  FSRAALELLLQAGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTA 687

Query: 378  PASELASCGLDVSQLNRPDRMQDNSANDRVNPVKGAVVFSNIVTTVSPTYAQEVRTAEGG 557
            PASE+ASCGLDV  LNRPDRMQDNSA+DRVNPVKGA+VFSNIVTTVSPTYAQEVRT+EGG
Sbjct: 688  PASEMASCGLDVHHLNRPDRMQDNSAHDRVNPVKGAIVFSNIVTTVSPTYAQEVRTSEGG 747


>ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana]
            gi|122230204|sp|Q0WVX5.1|SSY4_ARATH RecName:
            Full=Probable starch synthase 4,
            chloroplastic/amyloplastic; Short=AtSS4; AltName:
            Full=Soluble starch synthase IV; Flags: Precursor
            gi|110741548|dbj|BAE98723.1| starch synthase-like protein
            [Arabidopsis thaliana] gi|332658615|gb|AEE84015.1| starch
            synthase 4 [Arabidopsis thaliana]
          Length = 1040

 Score =  340 bits (873), Expect = 1e-91
 Identities = 152/180 (84%), Positives = 173/180 (96%)
 Frame = +3

Query: 18   MQALDMVLESYFDGRLFKNKVWVGVVEGLPVYFIEPQHPAKFFWRGQIYGEHDDFKRFSY 197
            ++ALD V+ESYFDG+L+KNK+W+G VEGLPV+FIEPQHP+KFFWRGQ YGE DDF+RFSY
Sbjct: 596  LRALDTVVESYFDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSY 655

Query: 198  FSRAALELILQAGKKPDILHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGSA 377
            FSRAALEL+LQ+GKKPDI+HCHDWQTAFVAPLYWD+YAPKGL+SARICFTCHNFEYQG+A
Sbjct: 656  FSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTA 715

Query: 378  PASELASCGLDVSQLNRPDRMQDNSANDRVNPVKGAVVFSNIVTTVSPTYAQEVRTAEGG 557
             ASEL SCGLDV+QLNRPDRMQD+S+ DRVNPVKGA++FSNIVTTVSPTYAQEVRTAEGG
Sbjct: 716  SASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGG 775


>emb|CAA16796.1| starch synthase-like protein [Arabidopsis thaliana]
            gi|7268617|emb|CAB78826.1| starch synthase-like protein
            [Arabidopsis thaliana]
          Length = 1071

 Score =  340 bits (873), Expect = 1e-91
 Identities = 152/180 (84%), Positives = 173/180 (96%)
 Frame = +3

Query: 18   MQALDMVLESYFDGRLFKNKVWVGVVEGLPVYFIEPQHPAKFFWRGQIYGEHDDFKRFSY 197
            ++ALD V+ESYFDG+L+KNK+W+G VEGLPV+FIEPQHP+KFFWRGQ YGE DDF+RFSY
Sbjct: 599  LRALDTVVESYFDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSY 658

Query: 198  FSRAALELILQAGKKPDILHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGSA 377
            FSRAALEL+LQ+GKKPDI+HCHDWQTAFVAPLYWD+YAPKGL+SARICFTCHNFEYQG+A
Sbjct: 659  FSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTA 718

Query: 378  PASELASCGLDVSQLNRPDRMQDNSANDRVNPVKGAVVFSNIVTTVSPTYAQEVRTAEGG 557
             ASEL SCGLDV+QLNRPDRMQD+S+ DRVNPVKGA++FSNIVTTVSPTYAQEVRTAEGG
Sbjct: 719  SASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGG 778


>ref|XP_002519725.1| starch synthase, putative [Ricinus communis]
            gi|223541142|gb|EEF42698.1| starch synthase, putative
            [Ricinus communis]
          Length = 998

 Score =  340 bits (872), Expect = 1e-91
 Identities = 154/180 (85%), Positives = 170/180 (94%)
 Frame = +3

Query: 18   MQALDMVLESYFDGRLFKNKVWVGVVEGLPVYFIEPQHPAKFFWRGQIYGEHDDFKRFSY 197
            ++ALD+ +ESYFDG+L+KNK+WVG +EGLPVYFIEP HP KFFWRGQ YGEHDDFKRFS+
Sbjct: 554  LRALDVTVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFKRFSF 613

Query: 198  FSRAALELILQAGKKPDILHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGSA 377
            FSRAALEL+ Q+GKKPDI+H HDWQTAFVAPLYWD+YAPKGLNSARICFTCHNFEYQG+A
Sbjct: 614  FSRAALELLHQSGKKPDIIHSHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTA 673

Query: 378  PASELASCGLDVSQLNRPDRMQDNSANDRVNPVKGAVVFSNIVTTVSPTYAQEVRTAEGG 557
            PASELASCGLDV  LNRPDRMQDN A+DR+NPVKGAVVFSNIVTTVSPTYAQEVRTAEGG
Sbjct: 674  PASELASCGLDVHHLNRPDRMQDNLAHDRINPVKGAVVFSNIVTTVSPTYAQEVRTAEGG 733


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