BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020747
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   518   e-144
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   509   e-142
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   509   e-142
ref|XP_002312939.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137
ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containi...   491   e-136

>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  518 bits (1334), Expect = e-144
 Identities = 254/386 (65%), Positives = 309/386 (80%)
 Frame = -1

Query: 1158 RLFDEMPVRDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTWNTMISGYARNGM 979
            +LFDEMP RDVVSWNLIISGYVSCRGK +IEEGR LFD+M ER  V+WNTMISGYA+NG 
Sbjct: 99   KLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGR 158

Query: 978  MDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGASLCALVSGLIQN 799
            MD+AL LF+ MPE+N +SWNAMV+GFLQNGDV +AIEFF++MP RD  SL ALVSGLIQN
Sbjct: 159  MDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQN 218

Query: 798  GKLDEAGDVLGKSGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFDQIPMCPLHGRKE 619
             +LD+A  +L   GN       LVHA+NTLIAGYG  GRV EA++LFD+IP     G+  
Sbjct: 219  SELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGR 278

Query: 618  ENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMISGYAHVSDMEAASN 439
               F RNVVSWN+MIMCYVKAGD++SA+KLF++M +RD  SWNTMISGY HV DME ASN
Sbjct: 279  TGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASN 338

Query: 438  LFNKLPDPDAQTWNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDYEEA 259
            LF+K+P PD  +WN M+SGYAQ G+L +A DFF +MP+K+LVSWNS+IAGYE+NGDY  A
Sbjct: 339  LFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGA 398

Query: 258  IELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLMHQLVTKTVNADTPIYNSLITMY 79
            I LF QMQVEG K D+HTLSS+L   +G+  L  GM +HQLV+KTV  D P+ N+LITMY
Sbjct: 399  INLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKTVIPDVPLNNALITMY 458

Query: 78   SRCGAIAQARSVFSEMESERDVVSWN 1
            SRCGAI +AR++F EM+ +++V+SWN
Sbjct: 459  SRCGAIFEARTIFYEMKLQKEVISWN 484



 Score =  105 bits (261), Expect = 3e-20
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 49/249 (19%)
 Frame = -1

Query: 600 NVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMISGYAHVSDM----------- 454
           N+ S N  I  + + G +  A+ LF++++ R+ ++WN+MISGY    +M           
Sbjct: 46  NLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMP 105

Query: 453 -----------------------EAASNLFNKLPDPDAQTWNSMMSGYAQIGNLGIARDF 343
                                  E   NLF+K+P+    +WN+M+SGYA+ G +  A   
Sbjct: 106 ERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGL 165

Query: 342 FYKMPEKSLVSWNSMIAGYEQNGDYEEAIELFYQMQVEGVKPDKHTLSSILGACAGLASL 163
           F  MPEK+ VSWN+M++G+ QNGD   AIE F +M     + D  +LS+++      + L
Sbjct: 166 FNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMP----ERDVTSLSALVSGLIQNSEL 221

Query: 162 YHG---MLMHQLVTKTVNADTPIYNSLITMYSRCGAIAQARSVFSEM------------E 28
                 +L +     +       YN+LI  Y + G + +A+++F ++             
Sbjct: 222 DQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGR 281

Query: 27  SERDVVSWN 1
            ER+VVSWN
Sbjct: 282 FERNVVSWN 290



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 50/188 (26%), Positives = 83/188 (44%)
 Frame = -1

Query: 564 VKAGDLVSAQKLFNEMDERDIISWNTMISGYAHVSDMEAASNLFNKLPDPDAQTWNSMMS 385
           VK+       +    +++ ++ S N  IS +     +  A  LF+KL   +  TWNSM+S
Sbjct: 27  VKSRSFAMPPRAKTSVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMIS 86

Query: 384 GYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDYEEAIELFYQMQVEGVKPDKHT 205
           GY + G +  AR  F +MPE+ +VSWN +I+GY                           
Sbjct: 87  GYVKRGEMTKARKLFDEMPERDVVSWNLIISGYV-------------------------- 120

Query: 204 LSSILGACAGLASLYHGMLMHQLVTKTVNADTPIYNSLITMYSRCGAIAQARSVFSEMES 25
                 +C G   +  G     L  K        +N++I+ Y++ G + +A  +F+ M  
Sbjct: 121 ------SCRGKRFIEEG---RNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFNTM-P 170

Query: 24  ERDVVSWN 1
           E++ VSWN
Sbjct: 171 EKNSVSWN 178


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  509 bits (1311), Expect = e-142
 Identities = 252/386 (65%), Positives = 309/386 (80%)
 Frame = -1

Query: 1158 RLFDEMPVRDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTWNTMISGYARNGM 979
            +LFDEMP RDVVSWNL+ISGYVSCRG+ ++EEGR LFD+M ERD V+WNTMISGY R+G 
Sbjct: 119  KLFDEMPDRDVVSWNLMISGYVSCRGR-WVEEGRHLFDEMPERDCVSWNTMISGYTRSGR 177

Query: 978  MDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGASLCALVSGLIQN 799
            MD+AL+LF  M ERNV+SWNAMVTGFLQNGDV +AIEFF +MP RD ASL ALV+GLIQN
Sbjct: 178  MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 237

Query: 798  GKLDEAGDVLGKSGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFDQIPMCPLHGRKE 619
            G+LDEA  +L  +    D   DLVHA+N L+AGYG +GRV +AR LFDQIP     G+K+
Sbjct: 238  GELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYD-GGQKD 296

Query: 618  ENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMISGYAHVSDMEAASN 439
               F RNVVSWNSMIMCYVKA D+ SA+ LF++M ERD ISWNTMISGY  +SDME A  
Sbjct: 297  GGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWM 356

Query: 438  LFNKLPDPDAQTWNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDYEEA 259
            LF ++P+PD  TWNSM+SG+AQ GNL +AR  F  +P+K+LVSWNSMIAGYE NGDY+ A
Sbjct: 357  LFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGA 416

Query: 258  IELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLMHQLVTKTVNADTPIYNSLITMY 79
             EL+ QM ++G KPD+HTLSS+L  C+G A+L+ GM +HQ +TKTV  D PI NSLITMY
Sbjct: 417  TELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMY 476

Query: 78   SRCGAIAQARSVFSEMESERDVVSWN 1
            SRCGAI +AR++F E++ +++V+SWN
Sbjct: 477  SRCGAIVEARTIFDEVKLQKEVISWN 502



 Score =  140 bits (353), Expect = 6e-31
 Identities = 103/348 (29%), Positives = 169/348 (48%), Gaps = 22/348 (6%)
 Frame = -1

Query: 1158 RLFDEMPV------------RDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTW 1015
            +LFD++P             R+VVSWN +I  YV  R    I   R+LFDQM ERD ++W
Sbjct: 282  QLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARD---IFSARVLFDQMKERDTISW 338

Query: 1014 NTMISGYARNGMMDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGA 835
            NTMISGY R   M++A  LF  MP  + ++WN+M++GF Q G++  A   F  +P ++  
Sbjct: 339  NTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLV 398

Query: 834  SLCALVSGLIQNGKLDEAGDVLGKSGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFD 655
            S  ++++G   NG    A ++  +   +  G     H  +++++       +     +  
Sbjct: 399  SWNSMIAGYENNGDYKGATELYRQM--LLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQ 456

Query: 654  QIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMD-ERDIISWNTMIS 478
            QI              + ++   NS+I  Y + G +V A+ +F+E+  ++++ISWN MI 
Sbjct: 457  QIT----------KTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIG 506

Query: 477  GYAHVSDMEAASNLFNKLPD----PDAQTWNSMMSGYAQIGNLGIARDFFYKMP-----E 325
            GYA       A  LF  +      P   T+ S+++  A  G +   R  F  M      E
Sbjct: 507  GYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGXVKEGRMHFKSMACEFGIE 566

Query: 324  KSLVSWNSMIAGYEQNGDYEEAIELFYQMQVEGVKPDKHTLSSILGAC 181
              +  + S++    ++G  EEA++L   M  E   PDK    ++LGAC
Sbjct: 567  PRIEHFASLVDIVGRHGQLEEAMDLINSMPFE---PDKAVWGALLGAC 611


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
            mitochondrial [Vitis vinifera]
          Length = 681

 Score =  509 bits (1310), Expect = e-142
 Identities = 252/386 (65%), Positives = 309/386 (80%)
 Frame = -1

Query: 1158 RLFDEMPVRDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTWNTMISGYARNGM 979
            +LFDEMP RDVVSWNL+ISGYVSC+G+ ++EEGR LFD+M ERD V+WNTMISGY R+G 
Sbjct: 119  KLFDEMPDRDVVSWNLMISGYVSCQGR-WVEEGRHLFDEMPERDCVSWNTMISGYTRSGR 177

Query: 978  MDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGASLCALVSGLIQN 799
            MD+AL+LF  M ERNV+SWNAMVTGFLQNGDV +AIEFF +MP RD ASL ALV+GLIQN
Sbjct: 178  MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 237

Query: 798  GKLDEAGDVLGKSGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFDQIPMCPLHGRKE 619
            G+LDEA  +L  S    D   DLVHA+N L+AGYG +GRV +AR LFDQIP     G+K+
Sbjct: 238  GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYD-GGQKD 296

Query: 618  ENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMISGYAHVSDMEAASN 439
               F RNVVSWNSMIMCYVKA D+ SA+ LF++M ERD ISWNTMISGY  +SDME A  
Sbjct: 297  GGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWM 356

Query: 438  LFNKLPDPDAQTWNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDYEEA 259
            LF ++P+PD  TWNSM+SG+AQ GNL +AR  F  +P+K+LVSWNSMIAGYE NGDY+ A
Sbjct: 357  LFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGA 416

Query: 258  IELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLMHQLVTKTVNADTPIYNSLITMY 79
             EL+ QM ++G KPD+HTLSS+L  C+G A+L+ GM +HQ +TKTV  D PI NSLITMY
Sbjct: 417  TELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMY 476

Query: 78   SRCGAIAQARSVFSEMESERDVVSWN 1
            SRCGAI +AR++F E++ +++V+SWN
Sbjct: 477  SRCGAIVEARTIFDEVKLQKEVISWN 502



 Score =  140 bits (354), Expect = 5e-31
 Identities = 112/399 (28%), Positives = 186/399 (46%), Gaps = 22/399 (5%)
 Frame = -1

Query: 1158 RLFDEMPV------------RDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTW 1015
            +LFD++P             R+VVSWN +I  YV  R    I   R+LFDQM ERD ++W
Sbjct: 282  QLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARD---IFSARVLFDQMKERDTISW 338

Query: 1014 NTMISGYARNGMMDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGA 835
            NTMISGY R   M++A  LF  MP  + ++WN+M++GF Q G++  A   F  +P ++  
Sbjct: 339  NTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLV 398

Query: 834  SLCALVSGLIQNGKLDEAGDVLGKSGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFD 655
            S  ++++G   NG    A ++  +   +  G     H  +++++       +     +  
Sbjct: 399  SWNSMIAGYENNGDYKGATELYRQM--LLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQ 456

Query: 654  QIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMD-ERDIISWNTMIS 478
            QI              + ++   NS+I  Y + G +V A+ +F+E+  ++++ISWN MI 
Sbjct: 457  QIT----------KTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIG 506

Query: 477  GYAHVSDMEAASNLFNKLPD----PDAQTWNSMMSGYAQIGNLGIARDFFYKMP-----E 325
            GYA       A  LF  +      P   T+ S+++  A  G +   R  F  M      E
Sbjct: 507  GYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIE 566

Query: 324  KSLVSWNSMIAGYEQNGDYEEAIELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLM 145
              +  + S++    ++G  EEA++L   M  E   PDK    ++LGAC    ++    + 
Sbjct: 567  PRIEHFASLVDIVGRHGQLEEAMDLINSMPFE---PDKAVWGALLGACRVHNNVELARVA 623

Query: 144  HQLVTKTVNADTPIYNSLITMYSRCGAIAQARSVFSEME 28
             + + K     +  Y  L  MY+  G    A  +   ME
Sbjct: 624  AEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMME 662


>ref|XP_002312939.1| predicted protein [Populus trichocarpa] gi|222849347|gb|EEE86894.1|
            predicted protein [Populus trichocarpa]
          Length = 610

 Score =  493 bits (1269), Expect = e-137
 Identities = 239/386 (61%), Positives = 305/386 (79%)
 Frame = -1

Query: 1158 RLFDEMPVRDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTWNTMISGYARNGM 979
            +LFDEMP RD+VSWNL+ISGYVSC G  +++EGR LFD+M ERD+V+WNTMISGYA+NG 
Sbjct: 49   KLFDEMPQRDIVSWNLMISGYVSCHGIRFLKEGRNLFDRMPERDIVSWNTMISGYAKNGR 108

Query: 978  MDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGASLCALVSGLIQN 799
            MD+AL +F  MPE +V+SWNA+VTGFLQNGDV +AIE+FE+MP RD ASL ALVSGLI+N
Sbjct: 109  MDEALRMFKLMPEGDVVSWNAIVTGFLQNGDVARAIEYFERMPERDAASLSALVSGLIRN 168

Query: 798  GKLDEAGDVLGKSGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFDQIPMCPLHGRKE 619
            G+LDEA  V+ +         +L+ A+NTLIAGYG   RV EAR LFDQIP C   G+  
Sbjct: 169  GELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKGKGG 228

Query: 618  ENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMISGYAHVSDMEAASN 439
            +  F RNVVSWN+MIMCYVKAG++V A++LF++M ERD ISWNTMISGY ++ DM+ AS 
Sbjct: 229  DGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISWNTMISGYVNMLDMDEASR 288

Query: 438  LFNKLPDPDAQTWNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDYEEA 259
            LF ++P+PD  +WN M++G+AQIG+L    D F +MP+K+LVSWNS+I GYE+N DY  A
Sbjct: 289  LFCEMPNPDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGA 348

Query: 258  IELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLMHQLVTKTVNADTPIYNSLITMY 79
            I++F QMQVEG KPD+HTLSS+L   AG+  L  GM +HQLVTKTV  D PI N+LITMY
Sbjct: 349  IKIFIQMQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVIPDVPINNALITMY 408

Query: 78   SRCGAIAQARSVFSEMESERDVVSWN 1
            SRCGAI +A ++F E++ +++V+SWN
Sbjct: 409  SRCGAIIEAGTIFDEVKLQKEVISWN 434



 Score =  143 bits (360), Expect = 9e-32
 Identities = 103/382 (26%), Positives = 180/382 (47%), Gaps = 51/382 (13%)
 Frame = -1

Query: 1014 NTMISGYARNGMMDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGA 835
            N  IS  A+NG +D+A  LF +M E N +SWNA++  +++  ++ KA + F++MP RD  
Sbjct: 1    NKKISNLAKNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIV 60

Query: 834  SLCALVSGLIQNGKLDEAGDVLGKSGNVSDGGVDL-VHAFNTLIAGYGASGRVAEARDLF 658
            S   ++SG +    +      L +  N+ D   +  + ++NT+I+GY  +GR+ EA  +F
Sbjct: 61   SWNLMISGYVSCHGI----RFLKEGRNLFDRMPERDIVSWNTMISGYAKNGRMDEALRMF 116

Query: 657  DQIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIIS------ 496
              +P               +VVSWN+++  +++ GD+  A + F  M ERD  S      
Sbjct: 117  KLMP-------------EGDVVSWNAIVTGFLQNGDVARAIEYFERMPERDAASLSALVS 163

Query: 495  -------------------------------WNTMISGYAHVSDMEAASNLFNKLPDPDA 409
                                           +NT+I+GY     ++ A  LF+++P  D 
Sbjct: 164  GLIRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDG 223

Query: 408  Q-------------TWNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDY 268
            +             +WN+M+  Y + GN+  AR+ F +M E+  +SWN+MI+GY    D 
Sbjct: 224  KGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISWNTMISGYVNMLDM 283

Query: 267  EEAIELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLMHQLVTKTVNADTPIYNSLI 88
            +EA  LF +M      PD  + + ++   A +  L     ++ L  +    +   +NS+I
Sbjct: 284  DEASRLFCEMP----NPDIFSWNKMIAGHAQIGDLDR---VNDLFGRMPQKNLVSWNSVI 336

Query: 87   TMYSRCGAIAQARSVFSEMESE 22
            T Y +      A  +F +M+ E
Sbjct: 337  TGYEKNDDYIGAIKIFIQMQVE 358


>ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
            mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  491 bits (1264), Expect = e-136
 Identities = 245/387 (63%), Positives = 303/387 (78%), Gaps = 1/387 (0%)
 Frame = -1

Query: 1158 RLFDEMPVRDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTWNTMISGYARNGM 979
            +LF+EMP RD+VSWNL++SGY+SC GK ++E  R +FDQM E D V+WNTM+SGYA++GM
Sbjct: 109  QLFEEMPNRDIVSWNLMLSGYISCGGK-FVERARNMFDQMPETDCVSWNTMLSGYAKSGM 167

Query: 978  MDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGASLCALVSGLIQN 799
            MD A ELF+ MPERNV+SWNAMV+G+L NG V KAIEFF+ MP RD ASL AL+SGLIQN
Sbjct: 168  MDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQN 227

Query: 798  GKLDEAGDVLGK-SGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFDQIPMCPLHGRK 622
             KL EA  +L +  GNV  G  DLV A+NTLIAGYG  G   EAR LFD+IP+C   G  
Sbjct: 228  DKLVEAERILLQYGGNVGKG--DLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYS 285

Query: 621  EENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMDERDIISWNTMISGYAHVSDMEAAS 442
                  RNV+SWNSMIMCYV+AGD+VSA++LF++M ERD  SWNTMISGY  + DM+ AS
Sbjct: 286  R-----RNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEAS 340

Query: 441  NLFNKLPDPDAQTWNSMMSGYAQIGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDYEE 262
            NLF+++P+PD  +WN M+SG+++IG+L +A D F ++PEKSLVSWNSMI+GYE+N DY+ 
Sbjct: 341  NLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKG 400

Query: 261  AIELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLMHQLVTKTVNADTPIYNSLITM 82
            A+ +F QMQ+EG KPD+HTLSSIL ACAGL  L  G  +HQLVTK   AD PI NSL+TM
Sbjct: 401  AMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIADLPINNSLVTM 460

Query: 81   YSRCGAIAQARSVFSEMESERDVVSWN 1
            YSRCGAI +AR VF EM  +RDV+SWN
Sbjct: 461  YSRCGAIVEARMVFDEMNLQRDVISWN 487



 Score =  147 bits (372), Expect = 4e-33
 Identities = 88/253 (34%), Positives = 136/253 (53%), Gaps = 11/253 (4%)
 Frame = -1

Query: 726 HAFNTLIAGYGASGRVAEARDLFDQIPMCPLHGRKEENCFVRNVVSWNSMIMCYVKAGDL 547
           ++ N  I+    +GR+ EAR+LFD                  N ++WN MI  YVK  ++
Sbjct: 58  YSLNKKISYLIRTGRINEARELFDSTEHW-------------NTITWNRMITAYVKRREM 104

Query: 546 VSAQKLFNEMDERDIISWNTMISGYAHVSD--MEAASNLFNKLPDPDAQTWNSMMSGYAQ 373
           + A++LF EM  RDI+SWN M+SGY       +E A N+F+++P+ D  +WN+M+SGYA+
Sbjct: 105 LKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAK 164

Query: 372 IGNLGIARDFFYKMPEKSLVSWNSMIAGYEQNGDYEEAIELFYQMQVEGVKPDKHTLSSI 193
            G +  A + F +MPE+++VSWN+M++GY  NG  E+AIE F  M     K D  +L ++
Sbjct: 165 SGMMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMP----KRDSASLRAL 220

Query: 192 LGACAGLASLYHG-MLMHQLVTKTVNAD-TPIYNSLITMYSRCGAIAQARSVFSEME--- 28
           +        L     ++ Q        D    YN+LI  Y + G   +AR +F  +    
Sbjct: 221 ISGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCC 280

Query: 27  ----SERDVVSWN 1
               S R+V+SWN
Sbjct: 281 DCGYSRRNVISWN 293



 Score =  142 bits (359), Expect = 1e-31
 Identities = 113/395 (28%), Positives = 192/395 (48%), Gaps = 18/395 (4%)
 Frame = -1

Query: 1158 RLFDEMPV--------RDVVSWNLIISGYVSCRGKEYIEEGRLLFDQMLERDLVTWNTMI 1003
            +LFD +P+        R+V+SWN +I  YV       I   R LFD+M+ERD  +WNTMI
Sbjct: 271  KLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGD---IVSARELFDKMVERDTFSWNTMI 327

Query: 1002 SGYARNGMMDDALELFSRMPERNVISWNAMVTGFLQNGDVFKAIEFFEKMPVRDGASLCA 823
            SGY +   M +A  LFSRMPE + +SWN M++GF + G +  A + F+++P +   S  +
Sbjct: 328  SGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNS 387

Query: 822  LVSGLIQNGKLDEAGDVLGKSGNVSDGGVDLVHAFNTLIAGYGASGRVAEARDLFDQIPM 643
            ++SG  +N     A ++  +     +G     H  +++++             L D +  
Sbjct: 388  MISGYEKNEDYKGAMNIFLQMQ--LEGKKPDRHTLSSILSACAG---------LVDLVLG 436

Query: 642  CPLHGRKEENCFVRNVVSWNSMIMCYVKAGDLVSAQKLFNEMD-ERDIISWNTMISGYAH 466
              +H +     F+ ++   NS++  Y + G +V A+ +F+EM+ +RD+ISWN MI GYA+
Sbjct: 437  TQIH-QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAY 495

Query: 465  VSDMEAASNLFNKLPDPDAQ----TWNSMMSGYAQIGNLGIARDFFYKMP-----EKSLV 313
                  A  LF+ +   + Q    T+ S+++  A  G +   R  F  M      +  + 
Sbjct: 496  HGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVE 555

Query: 312  SWNSMIAGYEQNGDYEEAIELFYQMQVEGVKPDKHTLSSILGACAGLASLYHGMLMHQLV 133
             + +++    ++G  EEA+ L   M  E   PDK    ++LGAC    ++       + +
Sbjct: 556  HYAALVDIIGRHGQLEEAMSLINSMPCE---PDKAVWGALLGACKVHNNVEMARAAAEAL 612

Query: 132  TKTVNADTPIYNSLITMYSRCGAIAQARSVFSEME 28
             K     +  Y  L  MY+  G    A  + + ME
Sbjct: 613  MKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMME 647