BLASTX nr result

ID: Coptis21_contig00020733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020733
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534139.1| PREDICTED: Down syndrome critical region pro...   460   e-127
ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126
ref|XP_003528979.1| PREDICTED: Down syndrome critical region pro...   454   e-125
ref|XP_002278791.1| PREDICTED: Down syndrome critical region pro...   453   e-125
emb|CBI15584.3| unnamed protein product [Vitis vinifera]              450   e-124

>ref|XP_003534139.1| PREDICTED: Down syndrome critical region protein 3 homolog [Glycine
            max]
          Length = 316

 Score =  460 bits (1184), Expect = e-127
 Identities = 227/316 (71%), Positives = 267/316 (84%)
 Frame = -2

Query: 1303 MSIQLKLNRSSRIYRPSEQLEGKIIAKFPSPISHQGIRITATGTVNLQVRGGSAGVIESI 1124
            MS++LKL+RS+RIYRPSE LEGKI+ K  S ISH GIR+T  G+VNLQVRGGSAGV+ES 
Sbjct: 1    MSVELKLSRSNRIYRPSEALEGKIVVKTQSSISHYGIRLTVKGSVNLQVRGGSAGVVESF 60

Query: 1123 VGVVKPLCILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISVQYLV 944
             GV+KP+ I+  +IEV+S GK+ SGT+EIPF++ L +     ER+YETFHGANIS+QYL 
Sbjct: 61   YGVIKPIPIVNRTIEVKSSGKIGSGTSEIPFSVNLRQRDENLERFYETFHGANISIQYLA 120

Query: 943  TADIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGF 764
            T DI RGYLHK +SA +E I+ES  ++L + P+SPEM  FYITQDTQRHPLLPEL SGGF
Sbjct: 121  TVDISRGYLHKSLSATMELIVESDKADLLQRPLSPEMAIFYITQDTQRHPLLPELKSGGF 180

Query: 763  RVAGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQI 584
            RV GKI TQCSL  P+SGELTVE SAVPI+SID+ + R+ESIL+GEKIVTETSL+QTTQI
Sbjct: 181  RVTGKICTQCSLSGPISGELTVETSAVPIHSIDLQLFRVESILLGEKIVTETSLVQTTQI 240

Query: 583  ADGDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPR 404
            ADGDVCR+MTLPIYVI PRLLTCPT LAGPFS+EF+V+IVISFQSELSKLH K DP+ PR
Sbjct: 241  ADGDVCRNMTLPIYVIVPRLLTCPTTLAGPFSVEFKVAIVISFQSELSKLHKKSDPKTPR 300

Query: 403  LWLAMETLPLRLFRTR 356
            LWLAMETLPL L RT+
Sbjct: 301  LWLAMETLPLELIRTK 316


>ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|222868513|gb|EEF05644.1|
            predicted protein [Populus trichocarpa]
          Length = 319

 Score =  458 bits (1179), Expect = e-126
 Identities = 227/315 (72%), Positives = 268/315 (85%), Gaps = 1/315 (0%)
 Frame = -2

Query: 1297 IQLKLNRSSRIYRPSEQLEGKIIAKFPSPISHQGIRITATGTVNLQVRGGSAGVIESIVG 1118
            I LK +RS+RIYRPSE +EGKI+ K PS ISH GIR++  G+VNLQVRGGSAGVIE+  G
Sbjct: 5    IALKFSRSNRIYRPSEPVEGKIVIKSPSSISHYGIRLSVNGSVNLQVRGGSAGVIETFYG 64

Query: 1117 VVKPLCILKESIEVRSPGKLSSGTTEIPFALILTE-GQAGFERYYETFHGANISVQYLVT 941
            VVKP+ I+ +SIEV+  GK+ SGTTE+PF ++L + G+   ER+YETFHG ++S+QYL T
Sbjct: 65   VVKPITIVNKSIEVKPSGKIGSGTTEVPFTMVLKQNGEKSLERFYETFHGTDVSIQYLFT 124

Query: 940  ADIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFR 761
             DI RGYL+K +SA +E I+ES  ++L + PVSPEM  FYITQDTQRHPLLPE+ SGGFR
Sbjct: 125  VDIARGYLYKSLSATMEVIVESDKADLLERPVSPEMAIFYITQDTQRHPLLPEIKSGGFR 184

Query: 760  VAGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIA 581
            V G++ T CSLLDP+SGELTVE SAVPI+SIDIH+LR+ESIL+GEKIVTETSLIQTTQIA
Sbjct: 185  VTGRMSTLCSLLDPISGELTVETSAVPISSIDIHLLRVESILMGEKIVTETSLIQTTQIA 244

Query: 580  DGDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRL 401
            DGDVCR++TLPIYVI PRLLTCP+V AGPFSIEF+VSIVISFQSELSKLH K DPR PRL
Sbjct: 245  DGDVCRNLTLPIYVILPRLLTCPSVFAGPFSIEFKVSIVISFQSELSKLHKKSDPRTPRL 304

Query: 400  WLAMETLPLRLFRTR 356
            WLAMETLPL L RTR
Sbjct: 305  WLAMETLPLELVRTR 319


>ref|XP_003528979.1| PREDICTED: Down syndrome critical region protein 3 homolog [Glycine
            max]
          Length = 316

 Score =  454 bits (1167), Expect = e-125
 Identities = 225/316 (71%), Positives = 265/316 (83%)
 Frame = -2

Query: 1303 MSIQLKLNRSSRIYRPSEQLEGKIIAKFPSPISHQGIRITATGTVNLQVRGGSAGVIESI 1124
            MS++LKL+RS+RIYRPSE LEGKII K  S ISH GIR+T  G+VNLQVRGGSAGV+ES 
Sbjct: 1    MSVELKLSRSNRIYRPSEALEGKIIVKTQSSISHYGIRLTVKGSVNLQVRGGSAGVVESF 60

Query: 1123 VGVVKPLCILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISVQYLV 944
             GV+KP+ I+  +IEV+S GK+ SGT+EIPF++ L +     ER+YETFHGANIS+QYL 
Sbjct: 61   YGVIKPIPIVNRTIEVKSSGKIGSGTSEIPFSVNLRQRDENLERFYETFHGANISIQYLA 120

Query: 943  TADIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGF 764
            T DI RGYLHK +SA +EFI+ES  ++L + P+SPEM  FYITQDTQRHPLLPEL SGGF
Sbjct: 121  TVDISRGYLHKSLSATMEFIVESDKADLQQQPLSPEMAIFYITQDTQRHPLLPELKSGGF 180

Query: 763  RVAGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQI 584
            RV GKI TQCSL  P+SGELTVE SAVPI+SIDI + R+ES+L+GEKIVTETSL+QTTQI
Sbjct: 181  RVTGKISTQCSLSGPISGELTVETSAVPIHSIDIQLFRVESVLLGEKIVTETSLVQTTQI 240

Query: 583  ADGDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPR 404
            ADGDVC ++TLPIYVI PRLLTCPT LAGPFS+EF+V+IVISFQSELSKLH K D + PR
Sbjct: 241  ADGDVCHNLTLPIYVILPRLLTCPTTLAGPFSVEFKVAIVISFQSELSKLHKKSDAKTPR 300

Query: 403  LWLAMETLPLRLFRTR 356
            LWLAMETL L L RT+
Sbjct: 301  LWLAMETLLLELVRTK 316


>ref|XP_002278791.1| PREDICTED: Down syndrome critical region protein 3 homolog [Vitis
            vinifera]
          Length = 314

 Score =  453 bits (1166), Expect = e-125
 Identities = 226/316 (71%), Positives = 270/316 (85%)
 Frame = -2

Query: 1303 MSIQLKLNRSSRIYRPSEQLEGKIIAKFPSPISHQGIRITATGTVNLQVRGGSAGVIESI 1124
            MSI++KL R +RIY P+E LEGKII K PS ISH GIR+T  G+VN QVRGGSAG IE++
Sbjct: 1    MSIEIKLFRPNRIYFPAEPLEGKIILKSPSSISHYGIRLTLDGSVNRQVRGGSAGAIEAL 60

Query: 1123 VGVVKPLCILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISVQYLV 944
             G VKP+ I+ +S+E+R  GK+ SGTTEIPF++IL   Q G +R+YETFHGANIS+QYLV
Sbjct: 61   YGAVKPIRIVNKSVEIRPAGKIGSGTTEIPFSVILR--QQGDDRFYETFHGANISIQYLV 118

Query: 943  TADIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGF 764
            T D++RGYL+K +SA +EFII+S  +NL + PV PEMV FYITQDTQRHPLLPEL SGGF
Sbjct: 119  TVDVMRGYLYKSLSATMEFIIDSDKANLFEPPVPPEMVIFYITQDTQRHPLLPELRSGGF 178

Query: 763  RVAGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQI 584
            RV GK+ +QCSLLDP+SGEL VEASAVPI+SID+ + R+ESILVGEKIVTE+SLIQTTQI
Sbjct: 179  RVTGKVSSQCSLLDPISGELIVEASAVPIHSIDLQLHRVESILVGEKIVTESSLIQTTQI 238

Query: 583  ADGDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPR 404
            ADGDVCR +T+PIYVI PRLLTCPTVLAGPFSIEF++SIVI+F+SEL KLHPK DP+ PR
Sbjct: 239  ADGDVCRRVTIPIYVILPRLLTCPTVLAGPFSIEFKISIVITFESELVKLHPKSDPKTPR 298

Query: 403  LWLAMETLPLRLFRTR 356
            LWLAMET+PL L RT+
Sbjct: 299  LWLAMETIPLELIRTK 314


>emb|CBI15584.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  450 bits (1158), Expect = e-124
 Identities = 224/316 (70%), Positives = 269/316 (85%)
 Frame = -2

Query: 1303 MSIQLKLNRSSRIYRPSEQLEGKIIAKFPSPISHQGIRITATGTVNLQVRGGSAGVIESI 1124
            MSI++KL R +RIY P+E LEGKII K PS ISH GIR+T  G+VN QVRGGSAG IE++
Sbjct: 1    MSIEIKLFRPNRIYFPAEPLEGKIILKSPSSISHYGIRLTLDGSVNRQVRGGSAGAIEAL 60

Query: 1123 VGVVKPLCILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISVQYLV 944
             G VKP+ I+ +S+E+R  GK+ SGTTEIPF++IL   Q G +R+YETFHGANIS+QYLV
Sbjct: 61   YGAVKPIRIVNKSVEIRPAGKIGSGTTEIPFSVILR--QQGDDRFYETFHGANISIQYLV 118

Query: 943  TADIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGF 764
            T D++RGYL+K +SA +EFII+S  +NL + PV PEMV FYITQDTQRHPLLPEL SGGF
Sbjct: 119  TVDVMRGYLYKSLSATMEFIIDSDKANLFEPPVPPEMVIFYITQDTQRHPLLPELRSGGF 178

Query: 763  RVAGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQI 584
            RV GK+ +QCSLLDP+SGEL VEASAVPI+SID+ + R+ESILVGEKIVTE+SLIQTTQ 
Sbjct: 179  RVTGKVSSQCSLLDPISGELIVEASAVPIHSIDLQLHRVESILVGEKIVTESSLIQTTQA 238

Query: 583  ADGDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPR 404
            +DGDVCR +T+PIYVI PRLLTCPTVLAGPFSIEF++SIVI+F+SEL KLHPK DP+ PR
Sbjct: 239  SDGDVCRRVTIPIYVILPRLLTCPTVLAGPFSIEFKISIVITFESELVKLHPKSDPKTPR 298

Query: 403  LWLAMETLPLRLFRTR 356
            LWLAMET+PL L RT+
Sbjct: 299  LWLAMETIPLELIRTK 314


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