BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020729
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    35   4e-07
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    35   4e-07
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    35   5e-07

>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 35.4 bits (80), Expect(3) = 4e-07
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 306 LTMGAPSEVCSHCGAIVWNA*RTKNQKTPRHPELSVCSQYGEPGKVQIVFIE 151
           + +G P+  C  CG+ +W   R    + PR+P  S+C   G+   V + F+E
Sbjct: 1   MDLGHPNFECEKCGSTMWYNERADKPRRPRNPTFSLCCLKGD---VSLEFLE 49



 Score = 33.5 bits (75), Expect(3) = 4e-07
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 164 LSLLKHPPQYLPELLDYNSGVRAMRFRKK 78
           L  L+ PP YL ELL Y  G  +++FR+K
Sbjct: 45  LEFLEQPPDYLKELLAYKGGRHSVKFREK 73



 Score = 28.9 bits (63), Expect(3) = 4e-07
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
 Frame = -2

Query: 82  KNLHSYNLIFAFTSICSKVDS-----GGPYAF 2
           + + +YN IFAFTS+ +K+D+      GPY +
Sbjct: 72  EKIRAYNSIFAFTSMGAKIDNTVNLRPGPYVY 103


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 35.4 bits (80), Expect(3) = 4e-07
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 306 LTMGAPSEVCSHCGAIVWNA*RTKNQKTPRHPELSVCSQYGEPGKVQIVFIE 151
           + +G P+  C  CG+ +W   R    + PR+P  S+C   G+   V + F+E
Sbjct: 1   MDLGHPNFECEKCGSTMWYNERADKPRRPRNPTFSLCCLKGD---VSLEFLE 49



 Score = 33.5 bits (75), Expect(3) = 4e-07
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 164 LSLLKHPPQYLPELLDYNSGVRAMRFRKK 78
           L  L+ PP YL ELL Y  G  +++FR+K
Sbjct: 45  LEFLEQPPDYLKELLAYKGGRHSVKFREK 73



 Score = 28.9 bits (63), Expect(3) = 4e-07
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
 Frame = -2

Query: 82  KNLHSYNLIFAFTSICSKVDS-----GGPYAF 2
           + + +YN IFAFTS+ +K+D+      GPY +
Sbjct: 72  EKIRAYNSIFAFTSMGAKIDNTVNLRPGPYVY 103


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score = 35.4 bits (80), Expect(3) = 5e-07
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 306 LTMGAPSEVCSHCGAIVWNA*RTKNQKTPRHPELSVCSQYGEPGKVQIVFIE 151
           + +G P+  C  CG+ +W   R    + PR+P  S+C   G+   V + F+E
Sbjct: 1   MDLGHPNFECEKCGSTMWYNERADKPRRPRNPTFSLCCLKGD---VSLEFLE 49



 Score = 33.5 bits (75), Expect(3) = 5e-07
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 164 LSLLKHPPQYLPELLDYNSGVRAMRFRKK 78
           L  L+ PP YL ELL Y  G  +++FR+K
Sbjct: 45  LEFLEQPPDYLKELLAYKGGRHSVKFREK 73



 Score = 28.5 bits (62), Expect(3) = 5e-07
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
 Frame = -2

Query: 82  KNLHSYNLIFAFTSICSKVDS-----GGPYAF 2
           + + +YN IFAFTS+  K+D+      GPY +
Sbjct: 72  EKIRAYNSIFAFTSMGDKIDNTVNLRPGPYVY 103