BLASTX nr result

ID: Coptis21_contig00020726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020726
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25975.3| unnamed protein product [Vitis vinifera]               62   2e-16
ref|XP_002274451.2| PREDICTED: uncharacterized protein LOC100258...    62   2e-16
gb|AAG51531.1|AC051631_11 unknown protein; 5864-31259 [Arabidops...    61   1e-15
ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    56   1e-14
ref|NP_175242.7| calcium-dependent lipid-binding-like protein [A...    57   4e-14

>emb|CBI25975.3| unnamed protein product [Vitis vinifera]
          Length = 4328

 Score = 62.0 bits (149), Expect(2) = 2e-16
 Identities = 37/58 (63%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
 Frame = +3

Query: 933  SNQGHPFSSGVTLAKLAAVTIYG*KSNKTFDTSGALDK*RKVSSI----FYEDIRSFP 1094
            SN GHPFSSGVTLAKLAAVTI   + N+TFDTSGALDK RK   +     Y D  S P
Sbjct: 220  SNPGHPFSSGVTLAKLAAVTI-DEQGNETFDTSGALDKLRKFLQVERLAMYHDSNSEP 276



 Score = 51.2 bits (121), Expect(2) = 2e-16
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 724 LQTPSGSS*WLSSLIATIIGNLKISISNVHIIYEGCV 834
           L +P  ++ WL SLIATIIGNLKISISNVHI YE  V
Sbjct: 183 LGSPPAANSWLGSLIATIIGNLKISISNVHIRYEDSV 219


>ref|XP_002274451.2| PREDICTED: uncharacterized protein LOC100258011 [Vitis vinifera]
          Length = 4275

 Score = 62.0 bits (149), Expect(2) = 2e-16
 Identities = 37/58 (63%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
 Frame = +3

Query: 933  SNQGHPFSSGVTLAKLAAVTIYG*KSNKTFDTSGALDK*RKVSSI----FYEDIRSFP 1094
            SN GHPFSSGVTLAKLAAVTI   + N+TFDTSGALDK RK   +     Y D  S P
Sbjct: 203  SNPGHPFSSGVTLAKLAAVTI-DEQGNETFDTSGALDKLRKFLQVERLAMYHDSNSEP 259



 Score = 51.2 bits (121), Expect(2) = 2e-16
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 724 LQTPSGSS*WLSSLIATIIGNLKISISNVHIIYEGCV 834
           L +P  ++ WL SLIATIIGNLKISISNVHI YE  V
Sbjct: 166 LGSPPAANSWLGSLIATIIGNLKISISNVHIRYEDSV 202


>gb|AAG51531.1|AC051631_11 unknown protein; 5864-31259 [Arabidopsis thaliana]
          Length = 4099

 Score = 60.8 bits (146), Expect(2) = 1e-15
 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
 Frame = +3

Query: 933  SNQGHPFSSGVTLAKLAAVTIYG*KSNKTFDTSGALDK*RKVSSI----FYEDIRSFP 1094
            SN GHPF++G+TLAKLAAVT+   + N+TFDTSGALDK RK   +     Y D  SFP
Sbjct: 217  SNPGHPFAAGITLAKLAAVTM-DEEGNETFDTSGALDKLRKSLQLERLALYHDSNSFP 273



 Score = 50.1 bits (118), Expect(2) = 1e-15
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +1

Query: 733 PSGSS*WLSSLIATIIGNLKISISNVHIIYEGCVR 837
           P G+S WL S+IATIIGNLK+SISNVHI YE   R
Sbjct: 165 PQGNS-WLGSIIATIIGNLKVSISNVHIRYEDSTR 198


>ref|XP_004147663.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101213129
            [Cucumis sativus]
          Length = 4194

 Score = 55.8 bits (133), Expect(2) = 1e-14
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
 Frame = +3

Query: 933  SNQGHPFSSGVTLAKLAAVTIYG*KSNKTFDTSGALDK*RKVSSI----FYEDIRSFP 1094
            SN G+PF +GVTLAKLAAVT+   + N+TFDTSGALDK RK+  +     Y D  + P
Sbjct: 196  SNPGYPFCTGVTLAKLAAVTM-DEQGNETFDTSGALDKLRKLVQLDRLAMYHDSNTLP 252



 Score = 51.6 bits (122), Expect(2) = 1e-14
 Identities = 26/38 (68%), Positives = 28/38 (73%)
 Frame = +1

Query: 724 LQTPSGSS*WLSSLIATIIGNLKISISNVHIIYEGCVR 837
           L  P G + WL SLI+TIIGNLKISISNVHI YE   R
Sbjct: 130 LGNPPGGTSWLGSLISTIIGNLKISISNVHIRYEDYAR 167


>ref|NP_175242.7| calcium-dependent lipid-binding-like protein [Arabidopsis thaliana]
            gi|332194125|gb|AEE32246.1| calcium-dependent
            lipid-binding-like protein [Arabidopsis thaliana]
          Length = 4146

 Score = 56.6 bits (135), Expect(2) = 4e-14
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +3

Query: 933  SNQGHPFSSGVTLAKLAAVTIYG*KSNKTFDTSGALDK*RK 1055
            SN GHPF++G+TLAKLAAVT+   + N+TFDTSGALDK RK
Sbjct: 186  SNPGHPFAAGITLAKLAAVTM-DEEGNETFDTSGALDKLRK 225



 Score = 48.9 bits (115), Expect(2) = 4e-14
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +1

Query: 733 PSGSS*WLSSLIATIIGNLKISISNVHIIYE 825
           P G+S WL S+IATIIGNLK+SISNVHI YE
Sbjct: 153 PQGNS-WLGSIIATIIGNLKVSISNVHIRYE 182


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