BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020724
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform...   478   e-132
ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131
ref|XP_004152096.1| PREDICTED: ribonuclease H2 subunit A-like [C...   467   e-129
ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ric...   461   e-127
ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like is...   450   e-124

>ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform 1 [Vitis vinifera]
           gi|296086584|emb|CBI32219.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  478 bits (1231), Expect = e-132
 Identities = 240/298 (80%), Positives = 265/298 (88%), Gaps = 2/298 (0%)
 Frame = +1

Query: 34  MGSE-GIREWGSKPCMMGIDEAGRGPVLGPMVYGCLYCSVSYKDTLSTLSFADSKTLKEE 210
           MGSE  + +W S+PCMMGIDEAGRGPVLGPMVYGCLYC+ SY +TLSTL+FADSKTLKEE
Sbjct: 1   MGSETALPKWASEPCMMGIDEAGRGPVLGPMVYGCLYCARSYHNTLSTLNFADSKTLKEE 60

Query: 211 KREELFENLKADESIGWAVNIIDPRELSAKMLKRTKINLNEISHDSASGLVARVLELGVL 390
           KREELFENLKADESIGWAV++IDP ELSAKMLK+ KINLNEISHDSA GL+ RVL +GVL
Sbjct: 61  KREELFENLKADESIGWAVDVIDPWELSAKMLKKNKINLNEISHDSAIGLITRVLNMGVL 120

Query: 391 LTEVYVDTVGDPEKYRIKLSERFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWV 570
           LTEVYVDTVGD EKYRIKLSERFP+VKFVVAKKADSLYPVVSGASIVAKVTRDRALR+WV
Sbjct: 121 LTEVYVDTVGDAEKYRIKLSERFPAVKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWV 180

Query: 571 PDETAENMHTKFGSGYPGDPATKAWLDDHKHSVFGFPTLVRFSWGTCTPYFKKLVEVLWE 750
             ETAENMH  FGSGYPGDP TK+WL  HKHSVFGFPTLVRFSWGTCT Y K +VEVLWE
Sbjct: 181 LVETAENMHRNFGSGYPGDPVTKSWLQHHKHSVFGFPTLVRFSWGTCTAYSKDIVEVLWE 240

Query: 751 AD-LDEESSSDKNGNRCQLKLSSVGVTGYKRKSEEIESTGKSRCKFFETRKLDLLTRF 921
           AD ++E+ S+++NG R QLKLSSVG    KRKSEEIES+GK RCKFF+ RKL+ LT+F
Sbjct: 241 ADKVEEDGSTNRNGKR-QLKLSSVGFIESKRKSEEIESSGKGRCKFFQARKLEQLTQF 297


>ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|222850829|gb|EEE88376.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  474 bits (1220), Expect = e-131
 Identities = 235/297 (79%), Positives = 259/297 (87%), Gaps = 1/297 (0%)
 Frame = +1

Query: 34  MGSEGIR-EWGSKPCMMGIDEAGRGPVLGPMVYGCLYCSVSYKDTLSTLSFADSKTLKEE 210
           M SE I  +W SKPC+MGIDEAGRGPVLGPMVYGCLYC+ SY+ TLSTL FADSKTLKEE
Sbjct: 1   MESESILPDWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYEKTLSTLKFADSKTLKEE 60

Query: 211 KREELFENLKADESIGWAVNIIDPRELSAKMLKRTKINLNEISHDSASGLVARVLELGVL 390
           KREELFE LKA+E IGWAV++IDPRELSAKMLK+ KINLNEISHDSASGLV RVL +GVL
Sbjct: 61  KREELFEKLKANELIGWAVDVIDPRELSAKMLKKIKINLNEISHDSASGLVTRVLNMGVL 120

Query: 391 LTEVYVDTVGDPEKYRIKLSERFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWV 570
           LT+VYVDTVGDPEKYRIKLSERFPS+KFVVAKKADSLYPVVSGASIVAKVTRDRALR+WV
Sbjct: 121 LTDVYVDTVGDPEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWV 180

Query: 571 PDETAENMHTKFGSGYPGDPATKAWLDDHKHSVFGFPTLVRFSWGTCTPYFKKLVEVLWE 750
            DETAENM   FGSGYPGDP TK+WL+ H+HSVFGFP+LVRFSWGTCT Y K +VEV+WE
Sbjct: 181 LDETAENMTRNFGSGYPGDPETKSWLEKHQHSVFGFPSLVRFSWGTCTSYSKNMVEVVWE 240

Query: 751 ADLDEESSSDKNGNRCQLKLSSVGVTGYKRKSEEIESTGKSRCKFFETRKLDLLTRF 921
           +D  EE  S  +  + QLKLSS GVT  KRKSEEIES+GKSRCKFF+ RKL+ L  F
Sbjct: 241 SDKTEEDGSSSSSGKRQLKLSSFGVTTSKRKSEEIESSGKSRCKFFQARKLEQLANF 297


>ref|XP_004152096.1| PREDICTED: ribonuclease H2 subunit A-like [Cucumis sativus]
           gi|449529756|ref|XP_004171864.1| PREDICTED: ribonuclease
           H2 subunit A-like [Cucumis sativus]
          Length = 297

 Score =  467 bits (1202), Expect = e-129
 Identities = 224/293 (76%), Positives = 256/293 (87%)
 Frame = +1

Query: 43  EGIREWGSKPCMMGIDEAGRGPVLGPMVYGCLYCSVSYKDTLSTLSFADSKTLKEEKREE 222
           + + +W SKPC+MGIDEAGRGPVLGPMVYGCLYC+ SY   LS+L+FADSKTLKEEKREE
Sbjct: 5   DSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKQLSSLNFADSKTLKEEKREE 64

Query: 223 LFENLKADESIGWAVNIIDPRELSAKMLKRTKINLNEISHDSASGLVARVLELGVLLTEV 402
           LFE+LKA+ESIGWAV++IDPRELS+KML + KINLNEISHDSA GLV +VL +GVLLTEV
Sbjct: 65  LFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLSMGVLLTEV 124

Query: 403 YVDTVGDPEKYRIKLSERFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVPDET 582
           YVDTVGDPEKYRIKLSE+FP++KFVVAKKADSLYPVVSGASIVAKVTRDRALR W  +ET
Sbjct: 125 YVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEET 184

Query: 583 AENMHTKFGSGYPGDPATKAWLDDHKHSVFGFPTLVRFSWGTCTPYFKKLVEVLWEADLD 762
           AENMH  FGSGYPGDP TK WL+DHKHSVFGFPTLVRFSWGTCT YFK +VEV WE+D  
Sbjct: 185 AENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKV 244

Query: 763 EESSSDKNGNRCQLKLSSVGVTGYKRKSEEIESTGKSRCKFFETRKLDLLTRF 921
           +E  +     + QL+LS+VG+T  KRKSEEIES+GK RCKFF+ RKL+ L+RF
Sbjct: 245 DEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF 297


>ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ricinus communis]
           gi|223545084|gb|EEF46595.1| ribonuclease hi large
           subunit, putative [Ricinus communis]
          Length = 299

 Score =  461 bits (1187), Expect = e-127
 Identities = 231/300 (77%), Positives = 260/300 (86%), Gaps = 4/300 (1%)
 Frame = +1

Query: 34  MGSEG---IREWGSKPCMMGIDEAGRGPVLGPMVYGCLYCSVSYKDTLSTLSFADSKTLK 204
           MGSE    + +W SKPC+MGIDEAGRGPVLGPMVYGCLYC+ SY+ TLSTLSFADSKTLK
Sbjct: 1   MGSETQSTLPKWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYERTLSTLSFADSKTLK 60

Query: 205 EEKREELFENLKADESIGWAVNIIDPRELSAKMLKRTKINLNEISHDSASGLVARVLELG 384
           E+KREELFENLKA+ESIGWAV++IDPRELSAKML++ KINLNEISH+SA GL+ RVL  G
Sbjct: 61  EDKREELFENLKANESIGWAVDVIDPRELSAKMLQKNKINLNEISHESAIGLITRVLNEG 120

Query: 385 VLLTEVYVDTVGDPEKYRIKLSERFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALRN 564
           VLLT+VY+DTVGD EKYRIKLSERFPS+KFVVAKKADSLYPVVSGASIVAKVTRDRALRN
Sbjct: 121 VLLTQVYLDTVGDAEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRN 180

Query: 565 WVPDETAENMHTKFGSGYPGDPATKAWLDDHKHSVFGFPTLVRFSWGTCTPYFKKLVEVL 744
           WV +ETAE +   FGSGYPGDP TKAWL  HKH VFGFPTLVRFSWGTC  Y+K  VEVL
Sbjct: 181 WVLEETAEGISRNFGSGYPGDPETKAWLKQHKHQVFGFPTLVRFSWGTCNSYYKDAVEVL 240

Query: 745 WEAD-LDEESSSDKNGNRCQLKLSSVGVTGYKRKSEEIESTGKSRCKFFETRKLDLLTRF 921
           WE+D +DE+ S + NG R QLKLSS G+T  K KSEEIES+GK RCKFF++RKL+ L+ F
Sbjct: 241 WESDKMDEDDSVNSNGKR-QLKLSSFGITIPKTKSEEIESSGKGRCKFFQSRKLEQLSHF 299


>ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like isoform 1 [Glycine max]
          Length = 297

 Score =  450 bits (1158), Expect = e-124
 Identities = 227/299 (75%), Positives = 255/299 (85%), Gaps = 3/299 (1%)
 Frame = +1

Query: 34  MGSEGIREWGSKPCMMGIDEAGRGPVLGPMVYGCLYCSVSYKDTLSTLSFADSKTLKEEK 213
           MGS+ + +W SKPC+MGIDEAGRGPVLGPMVYGCLYCS SY  TLSTLSFADSKTLKEEK
Sbjct: 1   MGSKILPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCSQSYLKTLSTLSFADSKTLKEEK 60

Query: 214 REELFENLKADESIGWAVNIIDPRELSAKMLKRTKINLNEISHDSASGLVARVLELGVLL 393
           REELFE LK ++SIGW V++IDPRELSAKMLK+ KINLNEISH SA GL+ RVL++GVLL
Sbjct: 61  REELFETLKLNDSIGWDVDVIDPRELSAKMLKKNKINLNEISHSSAMGLIDRVLKMGVLL 120

Query: 394 TEVYVDTVGDPEKYRIKLSERFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVP 573
           TEVY+DTVGD  KY +KLS  FPS+KFVVAKKADSLYPVVSGASIVAKVTRDRALR WV 
Sbjct: 121 TEVYIDTVGDAGKYEMKLSNSFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVL 180

Query: 574 DETAENMHTKFGSGYPGDPATKAWLDDHKHSVFGFPTLVRFSWGTCTPYFKKLVEVLWEA 753
           DETAENM   FGSGYPGDP TK+WL+DHKH +FGFP+LVRFSWGTC  YFK   EVLWE+
Sbjct: 181 DETAENMQRNFGSGYPGDPQTKSWLEDHKHHIFGFPSLVRFSWGTCNSYFKDAAEVLWES 240

Query: 754 D-LDEE--SSSDKNGNRCQLKLSSVGVTGYKRKSEEIESTGKSRCKFFETRKLDLLTRF 921
           D LDE+   S++KNG R QLKLS+VG T  KR SEEIES+GK RC+FF+ RKL+ LT F
Sbjct: 241 DNLDEDGGGSNNKNGKR-QLKLSNVGFTTSKR-SEEIESSGKGRCRFFQARKLEHLTYF 297