BLASTX nr result
ID: Coptis21_contig00020723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00020723
(1441 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACF86443.1| unknown [Zea mays] gi|414866391|tpg|DAA44948.1| T... 79 4e-12
ref|NP_001151251.1| F-box domain containing protein [Zea mays] g... 78 5e-12
ref|NP_001064509.1| Os10g0391200 [Oryza sativa Japonica Group] g... 78 7e-12
gb|EAZ15947.1| hypothetical protein OsJ_31391 [Oryza sativa Japo... 78 7e-12
gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indi... 77 9e-12
>gb|ACF86443.1| unknown [Zea mays] gi|414866391|tpg|DAA44948.1| TPA: F-box domain
containing protein [Zea mays]
Length = 408
Score = 78.6 bits (192), Expect = 4e-12
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 30/305 (9%)
Frame = -1
Query: 1270 DEIIVDIFGRLPAECIVRCGHACKPLHALTRSPAFVYKHLNRATPVIAFSYHGKSYRNPE 1091
++I+ I RLP + +VRC C+ L F+ H R + S+ +PE
Sbjct: 20 EDIMYGILLRLPPKSVVRCRAVCRSWLRLASDYIFLLDHRRRQPSLPLVSFILDDVGDPE 79
Query: 1090 IPE-----VNVHFTDDLARTISLKRVPLEEYCLP-------VLFGSYNGFLLFRGSKEVF 947
+ + +++H D++ +T+ L ++ +P L GS +G LL ++
Sbjct: 80 VGQYRLDVLDLHANDNVLQTV-LGFSSHVDWWMPHDRERRLALHGSCDGVLLLSTDNSLY 138
Query: 946 IWNPISEQLVRV-TLPLGSCLCGFFIYPQTMEYRII----HQSREYNYFKFFV----YGL 794
+ NP + + L + + GF+ + + +YR++ H+ +Y Y+ L
Sbjct: 139 LCNPTTRHWGGLPPLHRNNTIAGFYWHRISDDYRVLYFRRHEDGKYCYYVMEADTRKQRL 198
Query: 793 MSKESKEITFSHPP--TTEKAPILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLFNINSE 620
+S++ I S P P+LLHG LHW +P+ SI +FN +E
Sbjct: 199 VSRQESLIHSSWPAGCARRSPPVLLHGNLHWAPVSS--------RPE---SIAVFNTVAE 247
Query: 619 DFYTTPHPGFQCGLKKKHGKMELIEMEGHL---CFCDSSSNEN----VVIWILEDYEDMI 461
+F+ P P ++L+ MEG L C C + ++ V +W LEDY+D +
Sbjct: 248 EFWLMPSPAVYVN-SLLISNVKLLIMEGVLALSCSCGETVGDHGPSRVDLWFLEDYKDHV 306
Query: 460 WRKRF 446
W ++
Sbjct: 307 WACKY 311
>ref|NP_001151251.1| F-box domain containing protein [Zea mays]
gi|195645330|gb|ACG42133.1| F-box domain containing
protein [Zea mays]
Length = 408
Score = 78.2 bits (191), Expect = 5e-12
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 30/305 (9%)
Frame = -1
Query: 1270 DEIIVDIFGRLPAECIVRCGHACKPLHALTRSPAFVYKHLNRATPVIAFSYHGKSYRNPE 1091
++I+ I RLP + +VRC C+ L F+ H R + S+ +PE
Sbjct: 20 EDIMYGILLRLPPKSVVRCRAVCRSWLRLASDYIFLLDHRRRQPSLPLVSFILDDVGDPE 79
Query: 1090 IPE-----VNVHFTDDLARTISLKRVPLEEYCLP-------VLFGSYNGFLLFRGSKEVF 947
+ + +++H D++ +T+ L ++ +P L GS +G LL ++
Sbjct: 80 VGQYRLDVLDLHANDNVLQTV-LGFSSHFDWWMPHDRERRLALHGSCDGVLLLSTDNSLY 138
Query: 946 IWNPISEQLVRV-TLPLGSCLCGFFIYPQTMEYRII----HQSREYNYFKFFV----YGL 794
+ NP + + L + + GF+ + + +YR++ H+ +Y Y+ L
Sbjct: 139 LCNPTTRHWGGLPPLHRNNTIAGFYWHRISDDYRVLYFRRHEDGKYCYYVMEADTRKQRL 198
Query: 793 MSKESKEITFSHPP--TTEKAPILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLFNINSE 620
+S++ I S P P+LLHG LHW +P+ SI +FN +E
Sbjct: 199 VSRQESLIHSSWPAGCARRSPPVLLHGNLHWAPVSS--------RPE---SIAVFNTVAE 247
Query: 619 DFYTTPHPGFQCGLKKKHGKMELIEMEGHL---CFCDSSSNEN----VVIWILEDYEDMI 461
+F+ P P ++L+ MEG L C C + ++ V +W LEDY+D +
Sbjct: 248 EFWLMPSPAVYVN-SLLISNVKLLIMEGVLALSCSCGETVGDHGPSRVDLWFLEDYKDHV 306
Query: 460 WRKRF 446
W ++
Sbjct: 307 WACKY 311
>ref|NP_001064509.1| Os10g0391200 [Oryza sativa Japonica Group]
gi|14018043|gb|AAK52106.1|AC079936_2 Hypothetical protein
[Oryza sativa Japonica Group] gi|31431842|gb|AAP53561.1|
F-box protein interaction domain containing protein,
expressed [Oryza sativa Japonica Group]
gi|113639118|dbj|BAF26423.1| Os10g0391200 [Oryza sativa
Japonica Group] gi|125531773|gb|EAY78338.1| hypothetical
protein OsI_33424 [Oryza sativa Indica Group]
Length = 492
Score = 77.8 bits (190), Expect = 7e-12
Identities = 89/369 (24%), Positives = 153/369 (41%), Gaps = 27/369 (7%)
Frame = -1
Query: 1300 PNSFTGRQLPDEIIVDIFGRLPAECIVRCGHACKPLHALTRSPAFV--YKHLNRATPVIA 1127
P FTG + ++ +I RLPA ++RC C LT PAF+ + H R P+I
Sbjct: 138 PRGFTGGLDDEMVLCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLIY 197
Query: 1126 FSYHGKSYRNPEIPEVNVHFTDDLARTISLKRVPLEEYCLPVL----FGSYNGFLLFRGS 959
F G + + +++H + + P+ ++ P L S +G LL S
Sbjct: 198 FRRGG----SDRVGAIDLH---------AAQLRPVVDHTWPPLGYTVIASCDGLLLL-SS 243
Query: 958 KEVFIWNPISEQLVRVTLPLGSCLCGFFIYPQTMEYRIIHQSREYNYFKFFVYGLM---S 788
+I NP + + + + G + + + EYR+++ E++ + VY ++ S
Sbjct: 244 GRFYICNPATNHWAEIPQLVDADFLGLYPHNPSGEYRVLY--GEFHGEEECVYHILTLGS 301
Query: 787 KESKEITFSHPPTTEKAP--------------ILLHGVLHWMVSDDAYQIVHGVQPDCSN 650
E + IT + T + P +L+ G LHW + D
Sbjct: 302 DEPRCITMTMGSETVEQPLAREFLMHARGDRSVLVRGNLHWYLR----------HRDGGC 351
Query: 649 SIVLFNINSEDFYTTPHPGFQCGLKKKHGKMELIEMEGHLCFCDSSSNENVVIWILEDYE 470
I++F+ SE F HP G + L+EM+ L F + +W+L+DYE
Sbjct: 352 KIMVFDTASESFQWMRHPAIP-------GWVSLLEMDSTLVFSAVECTTRIDLWVLQDYE 404
Query: 469 DMIW--RKRFIVMMESLMEF--CGIQWRYGYNVNVGGFQIYNKELLVRVSKNDIILYDLQ 302
W + R + M + +F C ++ G++ V + ++LVR S IL+
Sbjct: 405 RSTWACKHRIELPMAQIRQFPECNLE-HLGWSAMVVSVE---GDVLVRCSNR--ILH--- 455
Query: 301 TGVCRRVGN 275
C R GN
Sbjct: 456 ---CDRKGN 461
>gb|EAZ15947.1| hypothetical protein OsJ_31391 [Oryza sativa Japonica Group]
Length = 492
Score = 77.8 bits (190), Expect = 7e-12
Identities = 89/369 (24%), Positives = 153/369 (41%), Gaps = 27/369 (7%)
Frame = -1
Query: 1300 PNSFTGRQLPDEIIVDIFGRLPAECIVRCGHACKPLHALTRSPAFV--YKHLNRATPVIA 1127
P FTG + ++ +I RLPA ++RC C LT PAF+ + H R P+I
Sbjct: 138 PRGFTGGLDDEMVLCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLIY 197
Query: 1126 FSYHGKSYRNPEIPEVNVHFTDDLARTISLKRVPLEEYCLPVL----FGSYNGFLLFRGS 959
F G + + +++H + + P+ ++ P L S +G LL S
Sbjct: 198 FRRGG----SDRVGAIDLH---------AAQLRPVVDHTWPPLGYTVIASCDGLLLL-SS 243
Query: 958 KEVFIWNPISEQLVRVTLPLGSCLCGFFIYPQTMEYRIIHQSREYNYFKFFVYGLM---S 788
+I NP + + + + G + + + EYR+++ E++ + VY ++ S
Sbjct: 244 GRFYICNPATNHWAEIPQLVDADFLGLYPHNPSGEYRVLY--GEFHGEEECVYHILTLGS 301
Query: 787 KESKEITFSHPPTTEKAP--------------ILLHGVLHWMVSDDAYQIVHGVQPDCSN 650
E + IT + T + P +L+ G LHW + D
Sbjct: 302 DEPRCITMTMGSETVEQPLAREFLMHARGDRSVLVRGNLHWYLR----------HRDGGC 351
Query: 649 SIVLFNINSEDFYTTPHPGFQCGLKKKHGKMELIEMEGHLCFCDSSSNENVVIWILEDYE 470
I++F+ SE F HP G + L+EM+ L F + +W+L+DYE
Sbjct: 352 KIMVFDTASESFQWMRHPAIP-------GWVSLLEMDSTLVFSAVECTTRIDLWVLQDYE 404
Query: 469 DMIW--RKRFIVMMESLMEF--CGIQWRYGYNVNVGGFQIYNKELLVRVSKNDIILYDLQ 302
W + R + M + +F C ++ G++ V + ++LVR S IL+
Sbjct: 405 RSTWACKHRIELPMAQIRQFPECNLE-HLGWSAMVVSVE---GDVLVRCSNR--ILH--- 455
Query: 301 TGVCRRVGN 275
C R GN
Sbjct: 456 ---CDRKGN 461
>gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indica Group]
Length = 960
Score = 77.4 bits (189), Expect = 9e-12
Identities = 86/360 (23%), Positives = 144/360 (40%), Gaps = 48/360 (13%)
Frame = -1
Query: 1276 LPDEIIVDIFGRLPAECIVRCGHACKPLHALTRSPAFVYKHLNRATPVIAFSY---HGKS 1106
LP+EI+ +I LP + I++C CK +T AF+ H R P ++ G
Sbjct: 21 LPEEIMSEILLLLPPKSILQCRAVCKAWRDVTSDRAFLLTHHRRQPPQRLLTFIRDVGSH 80
Query: 1105 YRNPEIPEVNVHFTDDLARTI-SLKRVPLEEYCLPV------LFGSYNGFLLFRGSKEVF 947
+ + +I + V D SL R ++Y + + S +G LL + +
Sbjct: 81 HDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNNYLH 140
Query: 946 IWNPISEQLVRVTLPL--GSCLCGFFIYPQTMEYRIIHQSREYNYFKFF----------- 806
+ NP + Q + V+ P + G + + EYR+++ RE+ + F
Sbjct: 141 LCNPTTRQWLWVSPPALQHDKVVGLYAHGHPSEYRVLYY-REFGLGRTFYITTVGSRKER 199
Query: 805 -VYGLMSKES--KEITFSHPPTTEKAPILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLF 635
++ S ES K +T T P L HG LHW+ Q N IV+F
Sbjct: 200 RIWPHSSSESLRKWLTKGTEDTEFNKPFLFHGNLHWL-----------PQSGRQNKIVVF 248
Query: 634 NINSEDFYTTPHPGFQCGLKKKHGKMELIEMEGHLCFCDSS-SNENVVIWILEDYEDMIW 458
+ E F P K H L+E+EG L +S + V +W+L+DY+ M+W
Sbjct: 249 DTLDEAFRWLHVP------FKMHNVSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVW 302
Query: 457 RKRF---------------------IVMMESLMEFCGIQWRYGYNVNVGGFQIYNKELLV 341
++ IV E + G W++ Y++ V + ++LV
Sbjct: 303 VHKYRIELPVIDIRRLVEDDVWFLHIVSQEGDVLVDGSYWQFHYDMKVSTVTSHELDILV 362