BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020711
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ...    77   1e-12
emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]    75   4e-12
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    72   4e-11
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    69   4e-10

>ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 405

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
 Frame = +3

Query: 27  IQKVVVSSVASNNDFVIMALRLSNLIFIRPGYETWTNFDIAGETGCISDIVHYMGKFVVV 206
           I+KV++ S       +++ +R   L   R G E W+  D   E     D+++Y G+F  +
Sbjct: 175 IKKVIMFSKGDEYGLMMIHIR-GRLALWRLGEEKWSLIDDGAEKSHFDDVIYYKGRFYAI 233

Query: 207 CNSGRGFLIDPCTLSVTLLADPA-GYGGT-KRLVESNGHLFLVE--------IFSNVSPW 356
              GR  +ID  +L  T LA P  G  GT K  VES G LFLV+        IF N    
Sbjct: 234 DYKGRIVVIDADSLKATELASPVHGSRGTHKHFVESFGELFLVDKYLDDELQIFCNDYSD 293

Query: 357 RHGTGGQFLPIGCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVSAFDFPGCK 521
                  + P+  EVF+  E +++W  V  + D V  V  + +FS+S+ DFPG K
Sbjct: 294 IVADVPDY-PVHFEVFKFIEEEQKWDWVSDIGDRVLFVGDDRTFSLSSTDFPGFK 347


>emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]
          Length = 986

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
 Frame = +3

Query: 27  IQKVVVSSVASNNDFVIMALRLSNLIFIRPGYETWTNFDIAGETGCISDIVHYMGKFVVV 206
           I+KV++ S       +++ +R   L   R G E W+  D   E     D+++Y G+F  +
Sbjct: 175 IKKVIMFSKGDEYGLMMIHIR-GRLALWRLGEEKWSLIDDGAEKSHFDDVIYYKGRFYAI 233

Query: 207 CNSGRGFLIDPCTLSVTLLADPA-GYGGT-KRLVESNGHLFLVEIFSNVSPWRHGTGGQF 380
              GR  +ID  +L  T LA P  G  GT K  VES G L   +I ++V  +        
Sbjct: 234 DYKGRIVVIDADSLKATELASPVHGSRGTHKHFVESFGEL---DIVADVPDY-------- 282

Query: 381 LPIGCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVSAFDFPGCK 521
            P+  EVF+  E +++W  V  + D V  V  + +FS+S+ DFPG K
Sbjct: 283 -PVHFEVFKFIEEEQKWDWVSDIGDRVLFVGDDRTFSLSSTDFPGFK 328



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
 Frame = +3

Query: 27   IQKVVVSSVASNNDFVIMALRLSNLIFIRPGYETWTNFDIAGETGCISDIVHYMGKFVVV 206
            I K+++ S       +++  R   L   R G + W+  D   E     D+++Y G+F  +
Sbjct: 565  ITKLIMFSKGDEYGLMMIHFR-GGLALWRLGEKKWSLIDDGAEKSHFDDVIYYKGRFYAI 623

Query: 207  CNSGRGFLIDPCTLSVTLLADPA--GYGGTKRLVESNGHLFLVEIFSNVSPWRHGTGGQF 380
               GR  +ID  +L  T LA P     G  +  VES G LFLV+ +       +      
Sbjct: 624  DYXGRIVVIDADSLKATELASPVHGSRGNHRHFVESFGELFLVDKYVVTFCNNYSDIVSV 683

Query: 381  LP---IGCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVSAFDFPGCK 521
            +P   +  EVF+  E +++W  V  + D V  V  + +FS+S+ DFPG K
Sbjct: 684  VPDYPVHXEVFKFIEEEQKWDWVSGIGDRVLFVDDDRTFSLSSTDFPGFK 733


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
 Frame = +3

Query: 21  LGIQKVVVS--SVASNNDFVIMALRLSN-LIFIRPGYETWTNFDIAGETGCISDIVHYMG 191
           L ++KVV+   +  + NDFV++ + +S  L   + G   WT   I        D++ Y G
Sbjct: 94  LYMEKVVMIWLNYENENDFVLLTIHVSGKLAMFKSGDRRWTI--IQDMPSPYDDVIVYKG 151

Query: 192 KFVVVCNSGRGFLIDPCTLSVTLLADPAGYGGTKRLVESNGHLFLVEIFSNVSPWRHGT- 368
            F  V N+GR  ++   T  + L+A+P   G  K LVES G L LV+++ ++     G  
Sbjct: 152 NFYAVDNTGRTVIVRLNT-ELGLIANPVFGGDKKYLVESLGDLLLVDMYLSIDTAEGGLS 210

Query: 369 -GGQFLP----------IGCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVSAFDFPG 515
            G +FL           +  +VF+L +  + W++V SL D V  +  + +FS S  D  G
Sbjct: 211 FGEEFLEHLAQYMSERTVRFKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSG 270

Query: 516 CK 521
           CK
Sbjct: 271 CK 272


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
 Frame = +3

Query: 21  LGIQKVVVSSVASNNDFVIMALRLSN-LIFIRPGYETWTNFDIAGETGCISDIVHYMGKF 197
           L ++KV   S  + +DF ++ + LS  L   R G + W   D         D++ + GKF
Sbjct: 155 LYMEKVAFCS-GNGDDFWLLTIHLSGKLAMFRSGDKKWMIIDDMQSP--YDDVIFFDGKF 211

Query: 198 VVVCNSGRGFLIDPCTLS--VTLLADPAGYGGTKR-LVESNGHLFLVEIFSNV--SPWRH 362
             V N+GR  ++D    S  V  LA  + +GG K+ LVES G L LV+ +  +      H
Sbjct: 212 YAVDNTGRTVVVDVADGSSPVVNLAASSVFGGDKKVLVESEGELLLVDTYFTMYHDDDEH 271

Query: 363 GTGGQFLPIGCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVSAFDFPGCK 521
                   I  +VFRL + +++WV+++SL D +  +  + SFS  A DF GCK
Sbjct: 272 VRWMIERMIHFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCK 324


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
 Frame = +3

Query: 21  LGIQKVVVSSVASNNDFVIMALRLSN-LIFIRPGYETWTNFDIAGETGCISDIVHYMGKF 197
           L ++KVV+  +    +FV++ + +S  L   + G + WT  +         D++ Y G+F
Sbjct: 158 LYMEKVVMIWLNCETEFVLLTIHVSGKLAMFKSGDKRWTIINEMPSP--FDDVIVYKGRF 215

Query: 198 VVVCNSGRGFLIDPCTLSVTLLADPAGYGGTKRLVESNGHLFLVEIFSNVSPWRHGTGG- 374
             V N+GR  ++   T  + L+ DP   G  K LVES G L LV+++ ++      + G 
Sbjct: 216 YAVDNTGRTVVVALDT-DLGLVGDPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGN 274

Query: 375 -------QFLP---IGCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVSAFDFPGCK 521
                  Q++    +  +VF+L E  + W++V +L D V  +  + +FS SA +  GCK
Sbjct: 275 DVVQDLVQYMSERTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCK 333